Mario Stanke

	2009
13		Dietmar Sommerfeld, Thomas Lingner, Mario Stanke, Burkhard Morgenstern, Harald Richter: AUGUSTUS at MediGRID: Adaption of a bioinformatics application to grid computing for efficient genome analysis. Future Generation Comp. Syst. 25(3): 337-345 (2009)
12		Anne-Kathrin Schultz, Ming Zhang, Ingo Bulla, Thomas Leitner, Bette Korber, Burkhard Morgenstern, Mario Stanke: jpHMM: Improving the reliability of recombination prediction in HIV-1. Nucleic Acids Research 37(Web-Server-Issue): 647-651 (2009)
	2008
11		Oliver Keller, Florian Odronitz, Mario Stanke, Martin Kollmar, Stephan Waack: Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species. BMC Bioinformatics 9: (2008)
10		Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler: Using native and syntenically mapped cDNA alignments to improve de novo gene finding. Bioinformatics 24(5): 637-644 (2008)
9		Donna Karolchik, Robert M. Kuhn, Robert Baertsch, Galt P. Barber, Hiram Clawson, Mark Diekhans, Belinda Giardine, Rachel A. Harte, Angela S. Hinrichs, Fan Hsu, K. M. Kober, Webb Miller, J. S. Pedersen, Andy Pohl, Brian J. Raney, Brooke L. Rhead, Kate R. Rosenbloom, Kayla E. Smith, Mario Stanke, Archana Thakkapallayil, Heather Trumbower, T. Wang, Ann S. Zweig, David Haussler, W. James Kent: The UCSC Genome Browser Database: 2008 update. Nucleic Acids Research 36(Database-Issue): 773-779 (2008)
	2007
8		Robert M. Kuhn, Donna Karolchik, Ann S. Zweig, Heather Trumbower, Daryl J. Thomas, Archana Thakkapallayil, Charles W. Sugnet, Mario Stanke, Kayla E. Smith, Adam C. Siepel, Kate R. Rosenbloom, Brooke L. Rhead, Brian J. Raney, Andy Pohl, J. S. Pedersen, Fan Hsu, Angela S. Hinrichs, Rachel A. Harte, Mark Diekhans, Hiram Clawson, Gill Bejerano, Galt P. Barber, Robert Baertsch, David Haussler, W. James Kent: The UCSC genome browser database: update 2007. Nucleic Acids Research 35(Database-Issue): 668-673 (2007)
	2006
7		Anne-Kathrin Schultz, Ming Zhang, Thomas Leitner, Carla Kuiken, Bette Korber, Burkhard Morgenstern, Mario Stanke: A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes. BMC Bioinformatics 7: 265 (2006)
6		Mario Stanke, Oliver Schöffmann, Burkhard Morgenstern, Stephan Waack: Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources. BMC Bioinformatics 7: 62 (2006)
5		Mario Stanke, Oliver Keller, Irfan Gunduz, Alec Hayes, Stephan Waack, Burkhard Morgenstern: AUGUSTUS: ab initio prediction of alternative transcripts. Nucleic Acids Research 34(Web-Server-Issue): 435-439 (2006)
4		Ming Zhang, Anne-Kathrin Schultz, Charles Calef, Carla Kuiken, Thomas Leitner, Bette Korber, Burkhard Morgenstern, Mario Stanke: jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1. Nucleic Acids Research 34(Web-Server-Issue): 463-465 (2006)
	2005
3		Mario Stanke, Burkhard Morgenstern: AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints. Nucleic Acids Research 33(Web-Server-Issue): 465-467 (2005)
	2004
2		Mario Stanke, Rasmus Steinkamp, Stephan Waack, Burkhard Morgenstern: AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Research 32(Web-Server-Issue): 309-312 (2004)
	2003
1		Mario Stanke, Stephan Waack: Gene prediction with a hidden Markov model and a new intron submodel. ECCB 2003: 215-225

Coauthor Index

1	Robert Baertsch	[8] [9] [10]
2	Galt P. Barber	[8] [9]
3	Gill Bejerano	[8]
4	Ingo Bulla	[12]
5	Charles Calef	[4]
6	Hiram Clawson	[8] [9]
7	Mark Diekhans	[8] [9] [10]
8	Belinda Giardine	[9]
9	Irfan Gunduz	[5]
10	Rachel A. Harte	[8] [9]
11	David Haussler	[8] [9] [10]
12	Alec Hayes	[5]
13	Angela S. Hinrichs	[8] [9]
14	Fan Hsu	[8] [9]
15	Donna Karolchik	[8] [9]
16	Oliver Keller	[5] [11]
17	W. James Kent	[8] [9]
18	K. M. Kober	[9]
19	Martin Kollmar	[11]
20	Bette Korber	[4] [7] [12]
21	Robert M. Kuhn	[8] [9]
22	Carla Kuiken	[4] [7]
23	Thomas Leitner	[4] [7] [12]
24	Thomas Lingner	[13]
25	Webb Miller	[9]
26	Burkhard Morgenstern	[2] [3] [4] [5] [6] [7] [12] [13]
27	Florian Odronitz	[11]
28	J. S. Pedersen	[8] [9]
29	Andy Pohl	[8] [9]
30	Brian J. Raney	[8] [9]
31	Brooke L. Rhead	[8] [9]
32	Harald Richter	[13]
33	Kate R. Rosenbloom	[8] [9]
34	Oliver Schöffmann	[6]
35	Anne-Kathrin Schultz	[4] [7] [12]
36	Adam C. Siepel	[8]
37	Kayla E. Smith	[8] [9]
38	Dietmar Sommerfeld	[13]
39	Rasmus Steinkamp	[2]
40	Charles W. Sugnet	[8]
41	Archana Thakkapallayil	[8] [9]
42	Daryl J. Thomas	[8]
43	Heather Trumbower	[8] [9]
44	Stephan Waack	[1] [2] [5] [6] [11]
45	T. Wang	[9]
46	Ming Zhang	[4] [7] [12]
47	Ann S. Zweig	[8] [9]

Colors in the list of coauthors