Fengzhu Sun

	2008
31		Xiting Yan, Fengzhu Sun: Testing gene set enrichment for subset of genes: Sub-GSE. BMC Bioinformatics 9: (2008)
30		Utz J. Pape, Sven Rahmann, Fengzhu Sun, Martin Vingron: Compound Poisson Approximation of the Number of Occurrences of a Position Frequency Matrix (PFM) on Both Strands. Journal of Computational Biology 15(6): 547-564 (2008)
	2007
29		Chao Cheng, Xiting Yan, Fengzhu Sun, Lei M. Li: Inferring activity changes of transcription factors by binding association with sorted expression profiles. BMC Bioinformatics 8: (2007)
28		Xiaotu Ma, Hyunju Lee, Li Wang, Fengzhu Sun: CGI: a new approach for prioritizing genes by combining gene expression and protein-protein interaction data. Bioinformatics 23(2): 215-221 (2007)
	2006
27		Zhidong Tu, Li Wang, Michelle N. Arbeitman, Ting Chen, Fengzhu Sun: An integrative approach for causal gene identification and gene regulatory pathway inference. ISMB (Supplement of Bioinformatics) 2006: 489-496
26		Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen: An integrated approach to the prediction of domain-domain interactions. BMC Bioinformatics 7: 269 (2006)
25		Pierre Nicolas, Fengzhu Sun, Lei M. Li: A model-based approach to selection of tag SNPs. BMC Bioinformatics 7: 303 (2006)
24		Rui Jiang, Hua Yang, Fengzhu Sun, Ting Chen: Searching for interpretable rules for disease mutations: a simulated annealing bump hunting strategy. BMC Bioinformatics 7: 417 (2006)
23		Quansong Ruan, Joshua A. Steele, Michael S. Schwalbach, Jed A. Fuhrman, Fengzhu Sun: A dynamic programming algorithm for binning microbial community profiles. Bioinformatics 22(12): 1508-1514 (2006)
22		Quansong Ruan, Debojyoti Dutta, Michael S. Schwalbach, Joshua A. Steele, Jed A. Fuhrman, Fengzhu Sun: Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors. Bioinformatics 22(20): 2532-2538 (2006)
21		Chao Cheng, Xiaotu Ma, Xiting Yan, Fengzhu Sun, Lei M. Li: MARD: a new method to detect differential gene expression in treatment-control time courses. Bioinformatics 22(21): 2650-2657 (2006)
	2005
20		Kui Zhang, Zhaohui S. Qin, Ting Chen, Jun S. Liu, Michael S. Waterman, Fengzhu Sun: HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. Bioinformatics 21(1): 131-134 (2005)
19		Kui Zhang, Fengzhu Sun, Hongyu Zhao: HAPLORE: a program for haplotype reconstruction in general pedigrees without recombination. Bioinformatics 21(1): 90-103 (2005)
	2004
18		Sung K. Kim, Kui Zhang, Fengzhu Sun: A Comparison of Different Strategies for Computing Confidence Intervals of the Linkage Disequilibrium Measure. Pacific Symposium on Biocomputing 2004: 128-139
17		Minghua Deng, Zhidong Tu, Fengzhu Sun, Ting Chen: Mapping gene ontology to proteins based on protein-protein interaction data. Bioinformatics 20(6): 895-902 (2004)
16		Wentian Li, Fengzhu Sun, Ivo Grosse: Extreme Value Distribution Based Gene Selection Criteria for Discriminant Microarray Data Analysis Using Logistic Regression. Journal of Computational Biology 11(2/3): 215-226 (2004)
15		Minghua Deng, Ting Chen, Fengzhu Sun: An Integrated Probabilistic Model for Functional Prediction of Proteins. Journal of Computational Biology 11(2/3): 463-475 (2004)
	2003
14		Minghua Deng, Fengzhu Sun, Ting Chen: Assessment of the reliability of protein-protein interactions and protein function prediction. Pacific Symposium on Biocomputing 2003: 140-151
13		Kui Zhang, Fengzhu Sun, Michael S. Waterman, Ting Chen: Dynamic programming algorithms for haplotype block partitioning: applications to human chromosome 21 haplotype data. RECOMB 2003: 332-340
12		Minghua Deng, Ting Chen, Fengzhu Sun: An integrated probabilistic model for functional prediction of proteins. RECOMB 2003: 95-103
11		Yinglei Lai, Deepali Shinde, Norman Arnheim, Fengzhu Sun: The Mutation Process of Microsatellites During the Polymerase Chain Reaction. Journal of Computational Biology 10(2): 143-156 (2003)
10		Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, Fengzhu Sun: Prediction of Protein Function Using Protein-Protein Interaction Data. Journal of Computational Biology 10(6): 947-960 (2003)
	2002
9		Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, Fengzhu Sun: Prediction of Protein Function Using Protein-Protein Interaction Data. CSB 2002: 197-206
8		Kui Zhang, Ting Chen, Michael S. Waterman, Zhaohui S. Qin, Jun S. Liu, Fengzhu Sun: Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data. Computational Methods for SNPs and Haplotype Inference 2002: 96-112
7		Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen: Inferring domain-domain interactions from protein-protein interactions. RECOMB 2002: 117-126
	2000
6		Dai Wang, Cheng Zhao, Rong Cheng, Fengzhu Sun: Estimation of the Mutation Rate During Error-prone Polymerase Chain Reaction. Journal of Computational Biology 7(1-2): 143-158 (2000)
	1999
5		Fengzhu Sun: Modeling DNA Shuffling. Journal of Computational Biology 6(1): 77-90 (1999)
	1998
4		Fengzhu Sun: Modeling DNA shuffling. RECOMB 1998: 251-257
	1997
3		Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman: Pooling strategies for establishing physical genome maps using FISH. RECOMB 1997: 294-299
2		Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman: Pooling Strategies for Establishing Physical Genome Maps Using FISH. Journal of Computational Biology 4(4): 467-486 (1997)
	1995
1		Fengzhu Sun: The Polymerase Chain Reaction and Branching Processes. Journal of Computational Biology 2(1): 63-86 (1995)

Coauthor Index

1	Michelle N. Arbeitman	[27]
2	Norman Arnheim	[2] [3] [11]
3	Gary Benson	[2] [3]
4	Ting Chen	[7] [8] [9] [10] [12] [13] [14] [15] [17] [20] [24] [26] [27]
5	Chao Cheng	[21] [29]
6	Rong Cheng	[6]
7	Minghua Deng	[7] [9] [10] [12] [14] [15] [17] [26]
8	Debojyoti Dutta	[22]
9	Jed A. Fuhrman	[22] [23]
10	Ivo Grosse	[16]
11	Rui Jiang	[24]
12	Sung K. Kim	[18]
13	Yinglei Lai	[11]
14	Hyunju Lee	[26] [28]
15	Lei M. Li	[21] [25] [29]
16	Wentian Li	[16]
17	Jun S. Liu	[8] [20]
18	Xiaotu Ma	[21] [28]
19	Shipra Mehta	[7] [9] [10]
20	Pierre Nicolas	[25]
21	Utz J. Pape	[30]
22	Zhaohui S. Qin	[8] [20]
23	Sven Rahmann	[30]
24	Quansong Ruan	[22] [23]
25	Michael S. Schwalbach	[22] [23]
26	Deepali Shinde	[11]
27	Joshua A. Steele	[22] [23]
28	Zhidong Tu	[17] [27]
29	Martin Vingron	[30]
30	Dai Wang	[6]
31	Li Wang	[27] [28]
32	Michael S. Waterman	[2] [3] [8] [13] [20]
33	Xiting Yan	[21] [29] [31]
34	Hua Yang	[24]
35	Kui Zhang	[8] [9] [10] [13] [18] [19] [20]
36	Cheng Zhao	[6]
37	Hongyu Zhao	[19]

Colors in the list of coauthors