| 2009 | ||
|---|---|---|
| 32 | Joseph E. Davis, Adnan Ozsoy, Sandeep Patel, Michela Taufer: Towards Large-Scale Molecular Dynamics Simulations on Graphics Processors. BICoB 2009: 176-186 | |
| 31 | James Atlas, Trilce Estrada, Keith Decker, Michela Taufer: Balancing Scientist Needs and Volunteer Preferences in Volunteer Computing Using Constraint Optimization. ICCS (1) 2009: 143-152 | |
| 30 | Trilce Estrada, Michela Taufer, Kevin Reed, David P. Anderson: EmBOINC: An emulator for performance analysis of BOINC projects. IPDPS 2009: 1-8 | |
| 29 | Michela Taufer, Abel Licon, Roberto Araiza, David Mireles, F. H. D. van Batenburg, Alexander P. Gultyaev, Ming-Ying Leung: PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots. Nucleic Acids Research 37(Database-Issue): 127-135 (2009) | |
| 2008 | ||
| 28 | Trilce Estrada, Olac Fuentes, Michela Taufer: A distributed evolutionary method to design scheduling policies for volunteer computing. Conf. Computing Frontiers 2008: 313-322 | |
| 27 | Michela Taufer, Thamar Solorio, Abel Licon, David Mireles, Ming-Ying Leung: On the Effectiveness of Rebuilding RNA Secondary Structures from Sequence Chunks. IPDPS 2008: 1-8 | |
| 26 | Michela Taufer, Ming-Ying Leung, Thamar Solorio, Abel Licon, David Mireles, Roberto Araiza, Kyle L. Johnson: RNAVLab: A virtual laboratory for studying RNA secondary structures based on grid computing technology. Parallel Computing 34(11): 661-680 (2008) | |
| 2007 | ||
| 25 | Michela Taufer, Andre Kerstens, Trilce Estrada, David A. Flores, Richard Zamudio, Patricia J. Teller, R. Armen, Charles L. Brooks III: Moving Volunteer Computing towards Knowledge-Constructed, Dynamically-Adaptive Modeling and Scheduling. IPDPS 2007: 1-8 | |
| 24 | Michela Taufer, Ming-Ying Leung, Kyle L. Johnson, Abel Licon: RNAVLab: A unified environment for computational RNA structure analysis based on grid computing technology. IPDPS 2007: 1-8 | |
| 23 | Richard Zamudio, Daniel Catarino, Michela Taufer, Brent Stearn, Karan Bhatia: Topaz: Extending Firefox to Accommodate the GridFTP Protocol. IPDPS 2007: 1-8 | |
| 22 | Michela Taufer, Andre Kerstens, Trilce Estrada, David A. Flores, Patricia J. Teller: SimBA: A Discrete Event Simulator for Performance Prediction of Volunteer Computing Projects. PADS 2007: 189-197 | |
| 21 | Guillermo A. Lopez, Michela Taufer, Patricia J. Teller: Evaluation of IEEE 754 floating-point arithmetic compliance across a wide range of heterogeneous computers. Richard Tapia Celebration of Diversity in Computing Conference 2007: 1-4 | |
| 2006 | ||
| 20 | Maria Gabriel Aguilera, Patricia J. Teller, Michela Taufer, F. Wolf: A systematic multi-step methodology for performance analysis of communication traces of distributed applications based on hierarchical clustering. IPDPS 2006 | |
| 19 | Trilce Estrada, Abel Licon, Michela Taufer: compPknots: A Framework for Parallel Prediction and Comparison of RNA Secondary Structures with Pseudoknots. ISPA Workshops 2006: 677-686 | |
| 18 | David A. Flores, Trilce Estrada, Michela Taufer, Patricia J. Teller, Andre Kerstens: Poster reception - SimBA: a discrete event simulator for performance prediction of volunteer computing projects. SC 2006: 168 | |
| 17 | Trilce Estrada, David A. Flores, Michela Taufer, Patricia J. Teller, Andre Kerstens, David P. Anderson: The Effectiveness of Threshold-Based Scheduling Policies in BOINC Projects. e-Science 2006: 88 | |
| 16 | Michela Taufer, Chahm An, Andreas Kerstens, Charles L. Brooks III: Predictor@Home: A "Protein Structure Prediction Supercomputer' Based on Global Computing. IEEE Trans. Parallel Distrib. Syst. 17(8): 786-796 (2006) | |
| 2005 | ||
| 15 | Michela Taufer, David P. Anderson, Pietro Cicotti, Charles L. Brooks III: Homogeneous Redundancy: a Technique to Ensure Integrity of Molecular Simulation Results Using Public Computing. IPDPS 2005 | |
| 14 | Michela Taufer, Chahm An, Andreas Kerstens, Charles L. Brooks III: Predictor@Home: A "Protein Structure Prediction Supercomputer" Based on Public-Resource Computing. IPDPS 2005 | |
| 13 | Michela Taufer, Patricia J. Teller, David P. Anderson, Charles L. Brooks III: Metrics for Effective Resource Management in Global Computing Environments. e-Science 2005: 204-211 | |
| 12 | Michela Taufer, Michael Crowley, Daniel J. Price, Andrew A. Chien, Charles L. Brooks III: Study of a highly accurate and fast protein-ligand docking method based on molecular dynamics. Concurrency and Computation: Practice and Experience 17(14): 1627-1641 (2005) | |
| 11 | Pietro Cicotti, Michela Taufer, Andrew A. Chien: DGMonitor: A Performance Monitoring Tool for Sandbox-Based Desktop Grid Platforms. The Journal of Supercomputing 34(2): 113-133 (2005) | |
| 2004 | ||
| 10 | Derrick Kondo, Michela Taufer, Charles L. Brooks III, Henri Casanova, Andrew A. Chien: Characterizing and Evaluating Desktop Grids: An Empirical Study. IPDPS 2004 | |
| 9 | Pietro Cicotti, Michela Taufer, Andrew A. Chien: DGMonitor: A Performance Monitoring Tool for Sandbox-Based Desktop Grid Platforms. IPDPS 2004 | |
| 8 | Michela Taufer, Michael Crowley, Daniel J. Price, Andrew A. Chien, Charles L. Brooks III: Study of a Highly Accurate and Fast Protein-Ligand Docking Algorithm Based on Molecular Dynamics. IPDPS 2004 | |
| 2003 | ||
| 7 | Bennet Uk, Michela Taufer, Thomas Stricker, Giovanni Settanni, Andrea Cavalli, Amedeo Caflisch: Combining Task- and Data Parallelism to Speed up Protein Folding on a Desktop Grid Platform. CCGRID 2003: 240- | |
| 6 | Michela Taufer, Thomas Stricker: A Performance Monitor Based on Virtual Global Time for Clusters of PCs. CLUSTER 2003: 64-72 | |
| 5 | Bennet Uk, Michela Taufer, Thomas Stricker, Giovanni Settanni, Andrea Cavalli: Implementation and Characterization of Protein Folding on a Desktop Computational Grid - Is CHARMM a Suitable Candidate for the United Devices MetaProcessor? IPDPS 2003: 50 | |
| 2002 | ||
| 4 | Michela Taufer, Thomas Stricker, Gerard Roos, Peter Güntert: On the Migration of the Scientific Code Dyana from SMPs to Clusters of PCs and on to the Grid. CCGRID 2002: 93-101 | |
| 3 | Michela Taufer, Egon Perathoner, Andrea Cavalli, Amedeo Caflisch, Thomas Stricker: Performance Characterization of a Molecular Dynamics Code on PC Clusters: Is There Any Easy Parallelism in CHARMM?. IPDPS 2002 | |
| 2 | Michela Taufer, Thomas Stricker, Roger Weber: Scalability and resource usage of an OLAP benchmark on clusters of PCs. SPAA 2002: 83-94 | |
| 1996 | ||
| 1 | Peter Arbenz, Martin Billeter, Peter Güntert, Peter Luginbühl, Michela Taufer, Urs von Matt: Molecular Dynamics Simulations on Cray Clusters using the SCIDDLE-PVM environment. PVM 1996: 142-149 | |