Denis Thieffry

	2012
27		Fabien Corblin, Eric Fanchon, Laurent Trilling, Claudine Chaouiya, Denis Thieffry: Automatic Inference of Regulatory and Dynamical Properties from Incomplete Gene Interaction and Expression Data. IPCAT 2012: 25-30
	2011
26		Denis Thieffry: Logical modelling of haematopoietic cell fate reprogramming. CMSB 2011: 7
25		Claudine Chaouiya, Aurélien Naldi, Elisabeth Remy, Denis Thieffry: Petri net representation of multi-valued logical regulatory graphs. Natural Computing 10(2): 727-750 (2011)
24		Morgane Thomas-Chollier, Matthieu Defrance, Alejandra Medina-Rivera, Olivier Sand, Carl Herrmann, Denis Thieffry, Jacques van Helden: RSAT 2011: regulatory sequence analysis tools. Nucleic Acids Research 39(Web-Server-Issue): 86-91 (2011)
23		Aurélien Naldi, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya: Dynamically consistent reduction of logical regulatory graphs. Theor. Comput. Sci. 412(21): 2207-2218 (2011)
	2010
22		Claudine Chaouiya, Aurélien Naldi, Elisabeth Remy, Denis Thieffry: Reduction of Logical Models of Regulatory Networks Yields Insight into Dynamical properties. CCA 2010: 524-529
21		Laurence Calzone, Laurent Tournier, Simon Fourquet, Denis Thieffry, Boris Zhivotovsky, Emmanuel Barillot, Andrei Zinovyev: Mathematical Modelling of Cell-Fate Decision in Response to Death Receptor Engagement. PLoS Computational Biology 6(3): (2010)
20		Aurélien Naldi, Jorge Carneiro, Claudine Chaouiya, Denis Thieffry: Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling. PLoS Computational Biology 6(9): (2010)
	2009
19		Aurélien Naldi, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya: A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties. CMSB 2009: 266-280
18		Touati Benoukraf, Pierre Cauchy, Romain Fenouil, Adrien Jeanniard, Frederic Koch, Sébastien Jaeger, Denis Thieffry, Jean Imbert, Jean-Christophe Andrau, Salvatore Spicuglia, Pierre Ferrier: CoCAS: a ChIP-on-chip analysis suite. Bioinformatics 25(7): 954-955 (2009)
17		Aurélien Naldi, D. Berenguier, Adrien Fauré, F. Lopez, Denis Thieffry, Claudine Chaouiya: Logical modelling of regulatory networks with GINsim 2.3. Biosystems 97(2): 134-139 (2009)
	2008
16		Aitor Gonzalez, Claudine Chaouiya, Denis Thieffry: Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc. ECCB 2008: 234-240
15		Claudine Chaouiya, Elisabeth Remy, Denis Thieffry: Petri net modelling of biological regulatory networks. J. Discrete Algorithms 6(2): 165-177 (2008)
	2007
14		Aurélien Naldi, Denis Thieffry, Claudine Chaouiya: Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks. CMSB 2007: 233-247
13		Adrien Fauré, Claudine Chaouiya, Andrea Ciliberto, Denis Thieffry: Logical modelling and analysis of the budding yeast cell cycle. BMC Bioinformatics 8(S-8): (2007)
12		Denis Thieffry: Dynamical roles of biological regulatory circuits. Briefings in Bioinformatics 8(4): 220-225 (2007)
	2006
11		Adrien Fauré, Aurélien Naldi, Claudine Chaouiya, Denis Thieffry: Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle. ISMB (Supplement of Bioinformatics) 2006: 124-131
10		Elisabeth Remy, Paul Ruet, Luis Eduardo Mendoza, Denis Thieffry, Claudine Chaouiya: From Logical Regulatory Graphs to Standard Petri Nets: Dynamical Roles and Functionality of Feedback Circuits. T. Comp. Sys. Biology: 56-72 (2006)
9		Claudine Chaouiya, Elisabeth Remy, Denis Thieffry: Qualitative Petri Net Modelling of Genetic Networks. T. Comp. Sys. Biology: 95-112 (2006)
	2005
8		E. Simão, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya: Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli. ECCB/JBI 2005: 196
	2004
7		Claudine Chaouiya, Elisabeth Remy, Paul Ruet, Denis Thieffry: Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets. ICATPN 2004: 137-156
	2003
6		Elisabeth Remy, Brigitte Mossé, Claudine Chaouiya, Denis Thieffry: A description of dynamical graphs associated to elementary regulatory circuits. ECCB 2003: 172-178
5		Claudine Chaouiya, Elisabeth Remy, Brigitte Mossé, Denis Thieffry: Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework. POSTA 2003: 119-126
	1999
4		L. Mendoza, Denis Thieffry, Elena R. Alvarez-Buylla: Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. Bioinformatics 15(7): 593-606 (1999)
	1998
3		Denis Thieffry, Heladia Salgado, Araceli M. Huerta, Julio Collado-Vides: Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12. Bioinformatics 14(5): 391-400 (1998)
2		Araceli M. Huerta, Heladia Salgado, Denis Thieffry, Julio Collado-Vides: RegulonDB: a database on transcriptional regulation in Escherichia coli. Nucleic Acids Research 26(1): 55-59 (1998)
	1996
1		David A. Rosenblueth, Denis Thieffry, Araceli M. Huerta, Heladia Salgado, Julio Collado-Vides: Syntactic recognition of regulatory regions in Escherichia coli. Computer Applications in the Biosciences 12(5): 415-422 (1996)

Coauthor Index

1	Elena R. Alvarez-Buylla	[4]
2	Jean-Christophe Andrau	[18]
3	Emmanuel Barillot	[21]
4	Touati Benoukraf	[18]
5	D. Berenguier	[17]
6	Laurence Calzone	[21]
7	Jorge Carneiro	[20]
8	Pierre Cauchy	[18]
9	Claudine Chaouiya	[5] [6] [7] [8] [9] [10] [11] [13] [14] [15] [16] [17] [19] [20] [22] [23] [25] [27]
10	Andrea Ciliberto	[13]
11	Julio Collado-Vides	[1] [2] [3]
12	Fabien Corblin	[27]
13	Matthieu Defrance	[24]
14	Eric Fanchon	[27]
15	Adrien Fauré	[11] [13] [17]
16	Romain Fenouil	[18]
17	Pierre Ferrier	[18]
18	Simon Fourquet	[21]
19	Aitor Gonzalez	[16]
20	Jacques van Helden	[24]
21	Carl Herrmann	[24]
22	Araceli M. Huerta	[1] [2] [3]
23	Jean Imbert	[18]
24	Sébastien Jaeger	[18]
25	Adrien Jeanniard	[18]
26	Frederic Koch	[18]
27	F. Lopez	[17]
28	Alejandra Medina-Rivera	[24]
29	L. Mendoza	[4]
30	Luis Eduardo Mendoza (Luis E. Mendoza Morales)	[10]
31	Brigitte Mossé	[5] [6]
32	Aurélien Naldi	[11] [14] [17] [19] [20] [22] [23] [25]
33	Elisabeth Remy	[5] [6] [7] [8] [9] [10] [15] [19] [22] [23] [25]
34	David A. Rosenblueth	[1]
35	Paul Ruet	[7] [10]
36	Heladia Salgado	[1] [2] [3]
37	Olivier Sand	[24]
38	E. Simão	[8]
39	Salvatore Spicuglia	[18]
40	Morgane Thomas-Chollier	[24]
41	Laurent Tournier	[21]
42	Laurent Trilling	[27]
43	Boris Zhivotovsky	[21]
44	Andrei Zinovyev	[21]

Colors in the list of coauthors

Last update Fri May 25 01:42:58 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page