 | 2009 |
|---|
| 18 |       | Aurélien Naldi,
Elisabeth Remy,
Denis Thieffry,
Claudine Chaouiya:
A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties.
CMSB 2009: 266-280 |
| 17 | | Touati Benoukraf,
Pierre Cauchy,
Romain Fenouil,
Adrien Jeanniard,
Frederic Koch,
Sébastien Jaeger,
Denis Thieffry,
Jean Imbert,
Jean-Christophe Andrau,
Salvatore Spicuglia,
Pierre Ferrier:
CoCAS: a ChIP-on-chip analysis suite.
Bioinformatics 25(7): 954-955 (2009) |
| 2008 |
|---|
| 16 | | Aitor Gonzalez,
Claudine Chaouiya,
Denis Thieffry:
Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc.
ECCB 2008: 234-240 |
| 15 | | Claudine Chaouiya,
Elisabeth Remy,
Denis Thieffry:
Petri net modelling of biological regulatory networks.
J. Discrete Algorithms 6(2): 165-177 (2008) |
| 2007 |
|---|
| 14 | | Aurélien Naldi,
Denis Thieffry,
Claudine Chaouiya:
Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks.
CMSB 2007: 233-247 |
| 13 | | Adrien Fauré,
Claudine Chaouiya,
Andrea Ciliberto,
Denis Thieffry:
Logical modelling and analysis of the budding yeast cell cycle.
BMC Bioinformatics 8(S-8): (2007) |
| 12 | | Denis Thieffry:
Dynamical roles of biological regulatory circuits.
Briefings in Bioinformatics 8(4): 220-225 (2007) |
| 2006 |
|---|
| 11 | | Adrien Fauré,
Aurélien Naldi,
Claudine Chaouiya,
Denis Thieffry:
Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.
ISMB (Supplement of Bioinformatics) 2006: 124-131 |
| 10 | | Elisabeth Remy,
Paul Ruet,
Luis Eduardo Mendoza,
Denis Thieffry,
Claudine Chaouiya:
From Logical Regulatory Graphs to Standard Petri Nets: Dynamical Roles and Functionality of Feedback Circuits.
T. Comp. Sys. Biology: 56-72 (2006) |
| 9 | | Claudine Chaouiya,
Elisabeth Remy,
Denis Thieffry:
Qualitative Petri Net Modelling of Genetic Networks.
T. Comp. Sys. Biology: 95-112 (2006) |
| 2005 |
|---|
| 8 | | E. Simão,
Elisabeth Remy,
Denis Thieffry,
Claudine Chaouiya:
Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli.
ECCB/JBI 2005: 196 |
| 2004 |
|---|
| 7 | | Claudine Chaouiya,
Elisabeth Remy,
Paul Ruet,
Denis Thieffry:
Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets.
ICATPN 2004: 137-156 |
| 2003 |
|---|
| 6 |  | Elisabeth Remy,
Brigitte Mossé,
Claudine Chaouiya,
Denis Thieffry:
A description of dynamical graphs associated to elementary regulatory circuits.
ECCB 2003: 172-178 |
| 5 | | Claudine Chaouiya,
Elisabeth Remy,
Brigitte Mossé,
Denis Thieffry:
Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework.
POSTA 2003: 119-126 |
| 1999 |
|---|
| 4 | | L. Mendoza,
Denis Thieffry,
E. R. Alvarez-Buylla:
Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis.
Bioinformatics 15(7): 593-606 (1999) |
| 1998 |
|---|
| 3 | | Denis Thieffry,
Heladia Salgado,
Araceli M. Huerta,
Julio Collado-Vides:
Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12.
Bioinformatics 14(5): 391-400 (1998) |
| 2 | | Araceli M. Huerta,
Heladia Salgado,
Denis Thieffry,
Julio Collado-Vides:
RegulonDB: a database on transcriptional regulation in Escherichia coli.
Nucleic Acids Research 26(1): 55-59 (1998) |
| 1996 |
|---|
| 1 | | David A. Rosenblueth,
Denis Thieffry,
Araceli M. Huerta,
Heladia Salgado,
Julio Collado-Vides:
Syntactic recognition of regulatory regions in Escherichia coli.
Computer Applications in the Biosciences 12(5): 415-422 (1996) |
