Julie Dawn Thompson

Julie D. Thompson

	2009
17		Mohamed Radhouene Aniba, Sophie Siguenza, Anne Friedrich, Frédéric Plewniak, Olivier Poch, Aron Marchler-Bauer, Julie Dawn Thompson: Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis. Briefings in Bioinformatics 10(1): 11-23 (2009)
	2008
16		Emmanuel Perrodou, Claudia Chica, Olivier Poch, Toby J. Gibson, Julie Dawn Thompson: A new protein linear motif benchmark for multiple sequence alignment software. BMC Bioinformatics 9: (2008)
	2007
15		M. A. Larkin, Gordon Blackshields, N. P. Brown, R. Chenna, Paul A. McGettigan, Hamish McWilliam, Franck Valentin, Iain M. Wallace, Andreas Wilm, Rodrigo Lopez, Julie Dawn Thompson, Toby J. Gibson, Desmond G. Higgins: Clustal W and Clustal X version 2.0. Bioinformatics 23(21): 2947-2948 (2007)
	2006
14		Julie D. Thompson, Arnaud Muller, Andrew M. Waterhouse, James B. Procter, Geoffrey J. Barton, Frédéric Plewniak, Olivier Poch: MACSIMS : multiple alignment of complete sequences information management system. BMC Bioinformatics 7: 318 (2006)
13		Nicolas Garnier, Anne Friedrich, Raphael Bolze, Emmanuel Bettler, Luc Moulinier, Christophe Geourjon, Julie Dawn Thompson, Gilbert Deléage, Olivier Poch: MAGOS: multiple alignment and modelling server. Bioinformatics 22(17): 2164-2165 (2006)
	2005
12		Frédéric Chalmel, Aurélie Lardenois, Julie Dawn Thompson, Jean Muller, José-Alain Sahel, Thierry Léveillard, Olivier Poch: GOAnno: GO annotation based on multiple alignment. Bioinformatics 21(9): 2095-2096 (2005)
11		Laurent Bianchetti, Julie Dawn Thompson, Odile Lecompte, Frédéric Plewniak, Olivier Poch: Valid: Validation of Protein Sequence Quality Based on Multiple Alignment Data. J. Bioinformatics and Computational Biology 3(4): 929-948 (2005)
	2003
10		Julie Dawn Thompson, Jean-Claude Thierry, Olivier Poch: RASCAL: Rapid Scanning and Correction of Multiple Sequence Alignments. Bioinformatics 19(9): 1155-1161 (2003)
9		Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson: Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Research 31(13): 3497-3500 (2003)
8		Frédéric Plewniak, Laurent Bianchetti, Yann Brelivet, Annaick Carles, Frédéric Chalmel, Odile Lecompte, Thiebaut Mochel, Luc Moulinier, Arnaud Muller, Jean Muller, Veronique Prigent, Raymond Ripp, Jean-Claude Thierry, Julie Dawn Thompson, Nicolas Wicker, Olivier Poch: PipeAlign: a new toolkit for protein family analysis. Nucleic Acids Research 31(13): 3829-3832 (2003)
	2001
7		Anne Bahr, Julie Dawn Thompson, Jean-Claude Thierry, Olivier Poch: BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations. Nucleic Acids Research 29(1): 323-326 (2001)
	2000
6		Frédéric Plewniak, Julie Dawn Thompson, Olivier Poch: Ballast: Blast post-processing based on locally conserved segments. Bioinformatics 16(9): 750-759 (2000)
	1999
5		Julie Dawn Thompson, Frédéric Plewniak, Olivier Poch: BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs. Bioinformatics 15(1): 87-88 (1999)
4		Julie Dawn Thompson, Frédéric Plewniak, Olivier Poch: A comprehensive comparison of multiple sequence alignment programs. Nucleic Acids Research 27(13): 2682-2690 (1999)
	1995
3		Julie Dawn Thompson: Introducing variable gap penalties to sequence alignment in linear space. Computer Applications in the Biosciences 11(2): 181-186 (1995)
	1994
2		Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson: Improved sensitivity of profile searches through the use of sequence weights and gap excision. Computer Applications in the Biosciences 10(1): 19-29 (1994)
1		Toby J. Gibson, Julie Dawn Thompson: Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases. Nucleic Acids Research 22(13): 2552-2556 (1994)

Coauthor Index

1	Mohamed Radhouene Aniba	[17]
2	Anne Bahr	[7]
3	Geoffrey J. Barton	[14]
4	Emmanuel Bettler	[13]
5	Laurent Bianchetti	[8] [11]
6	Gordon Blackshields	[15]
7	Raphael Bolze	[13]
8	Yann Brelivet	[8]
9	N. P. Brown	[15]
10	Annaick Carles	[8]
11	Frédéric Chalmel	[8] [12]
12	R. Chenna	[15]
13	Claudia Chica	[16]
14	Gilbert Deléage	[13]
15	Anne Friedrich	[13] [17]
16	Nicolas Garnier	[13]
17	Christophe Geourjon	[13]
18	Toby J. Gibson	[1] [2] [9] [15] [16]
19	Desmond G. Higgins	[2] [9] [15]
20	Tadashi Koike	[9]
21	Aurélie Lardenois	[12]
22	M. A. Larkin	[15]
23	Odile Lecompte	[8] [11]
24	Thierry Léveillard	[12]
25	Rodrigo Lopez	[9] [15]
26	Aron Marchler-Bauer	[17]
27	Paul A. McGettigan	[15]
28	Hamish McWilliam	[15]
29	Thiebaut Mochel	[8]
30	Luc Moulinier	[8] [13]
31	Arnaud Muller	[8] [14]
32	Jean Muller	[8] [12]
33	Emmanuel Perrodou	[16]
34	Frédéric Plewniak	[4] [5] [6] [8] [11] [14] [17]
35	Olivier Poch	[4] [5] [6] [7] [8] [10] [11] [12] [13] [14] [16] [17]
36	Veronique Prigent	[8]
37	James B. Procter	[14]
38	Chenna Ramu	[9]
39	Raymond Ripp	[8]
40	José-Alain Sahel	[12]
41	Sophie Siguenza	[17]
42	Hideaki Sugawara	[9]
43	Jean-Claude Thierry	[7] [8] [10]
44	Franck Valentin	[15]
45	Iain M. Wallace	[15]
46	Andrew M. Waterhouse	[14]
47	Nicolas Wicker	[8]
48	Andreas Wilm	[15]