Yoshimasa Tsuruoka

	2009
23		Yoshimasa Tsuruoka, Jun-ichi Tsujii, Sophia Ananiadou: Fast Full Parsing by Linear-Chain Conditional Random Fields. EACL 2009: 790-798
	2008
22		Naoaki Okazaki, Yoshimasa Tsuruoka, Sophia Ananiadou, Jun-ichi Tsujii: A Discriminative Candidate Generator for String Transformations. EMNLP 2008: 447-456
21		Yoshinobu Kano, Ngan Nguyen, Rune Sætre, Kazuhiro Yoshida, Yusuke Miyao, Yoshimasa Tsuruoka, Yuichiro Matsubayashi, Sophia Ananiadou, Jun-ichi Tsujii: Filling the Gaps Between Tools and Users: A Tool Comparator, Using Protein-Protein Interactions as an Example. Pacific Symposium on Biocomputing 2008: 616-627
20		Chikashi Nobata, Philip Cotter, Naoaki Okazaki, Brian Rea, Yutaka Sasaki, Yoshimasa Tsuruoka, Jun-ichi Tsujii, Sophia Ananiadou: Kleio: a knowledge-enriched information retrieval system for biology. SIGIR 2008: 787-788
19		Yoshimasa Tsuruoka, Jun-ichi Tsujii, Sophia Ananiadou: Accelerating the annotation of sparse named entities by dynamic sentence selection. BMC Bioinformatics 9(S-11): (2008)
18		Yutaka Sasaki, Yoshimasa Tsuruoka, John McNaught, Sophia Ananiadou: How to make the most of NE dictionaries in statistical NER. BMC Bioinformatics 9(S-11): (2008)
17		Yoshimasa Tsuruoka, John McNaught, Sophia Ananiadou: Normalizing biomedical terms by minimizing ambiguity and variability. BMC Bioinformatics 9(S-3): (2008)
16		Yoshimasa Tsuruoka, Jun-ichi Tsujii, Sophia Ananiadou: FACTA: a text search engine for finding associated biomedical concepts. Bioinformatics 24(21): 2559-2560 (2008)
	2007
15		Kazuhiro Yoshida, Yoshimasa Tsuruoka, Yusuke Miyao, Jun-ichi Tsujii: Ambiguous Part-of-Speech Tagging for Improving Accuracy and Domain Portability of Syntactic Parsers. IJCAI 2007: 1783-1788
14		Yoshimasa Tsuruoka, John McNaught, Jun-ichi Tsujii, Sophia Ananiadou: Learning string similarity measures for gene/protein name dictionary look-up using logistic regression. Bioinformatics 23(20): 2768-2774 (2007)
	2006
13		Tomoko Ohta, Yusuke Miyao, Takashi Ninomiya, Yoshimasa Tsuruoka, Akane Yakushiji, Katsuya Masuda, Jumpei Takeuchi, Kazuhiro Yoshida, Tadayoshi Hara, Jin-Dong Kim, Yuka Tateisi, Jun-ichi Tsujii: An Intelligent Search Engine and GUI-based Efficient MEDLINE Search Tool Based on Deep Syntactic Parsing. ACL 2006
12		Daisuke Okanohara, Yusuke Miyao, Yoshimasa Tsuruoka, Jun-ichi Tsujii: Improving the Scalability of Semi-Markov Conditional Random Fields for Named Entity Recognition. ACL 2006
11		Yusuke Miyao, Tomoko Ohta, Katsuya Masuda, Yoshimasa Tsuruoka, Kazuhiro Yoshida, Takashi Ninomiya, Jun-ichi Tsujii: Semantic Retrieval for the Accurate Identification of Relational Concepts in Massive Textbases. ACL 2006
10		Hong-Woo Chun, Yoshimasa Tsuruoka, Jin-Dong Kim, Rie Shiba, Naoki Nagata, Teruyoshi Hishiki, Jun-ichi Tsujii: Extraction of Gene-Disease Relations from Medline Using Domain Dictionaries and Machine Learning. Pacific Symposium on Biocomputing 2006: 4-15
9		Hong-Woo Chun, Yoshimasa Tsuruoka, Jin-Dong Kim, Rie Shiba, Naoki Nagata, Teruyoshi Hishiki, Jun-ichi Tsujii: Automatic recognition of topic-classified relations between prostate cancer and genes using MEDLINE abstracts. BMC Bioinformatics 7(S-3): (2006)
8		Rune Sætre, Harald Søvik, Tore Amble, Yoshimasa Tsuruoka: GeneTUC, GENIA and Google: Natural Language Understanding in Molecular Biology Literature. T. Comp. Sys. Biology: 68-82 (2006)
	2005
7		Yoshimasa Tsuruoka, Jun-ichi Tsujii: Bidirectional Inference with the Easiest-First Strategy for Tagging Sequence Data. HLT/EMNLP 2005
6		Yoshimasa Tsuruoka, Yuka Tateishi, Jin-Dong Kim, Tomoko Ohta, John McNaught, Sophia Ananiadou, Jun-ichi Tsujii: Developing a Robust Part-of-Speech Tagger for Biomedical Text. Panhellenic Conference on Informatics 2005: 382-392
	2004
5		Yoshimasa Tsuruoka, Jun-ichi Tsujii: Iterative CKY Parsing for Probabilistic Context-Free Grammars. IJCNLP 2004: 52-60
4		Yoshimasa Tsuruoka, Jun-ichi Tsujii: Improving the performance of dictionary-based approaches in protein name recognition. Journal of Biomedical Informatics 37(6): 461-470 (2004)
	2003
3		Yoshimasa Tsuruoka, Jun-ichi Tsujii: Probabilistic term variant generator for biomedical terms. SIGIR 2003: 167-173
2		Teruyoshi Hishiki, Osamu Ogasawara, Yoshimasa Tsuruoka, Kousaku Okubo: Indexing anatomical concepts to OMIM Clinical Synopsis using UMLS Metathesaurus. In Silico Biology 4: (2003)
	2001
1		Yoshimasa Tsuruoka, Takashi Chikayama: Estimating Reliability of Contextual Evidences in Decision-List Classifiers under Bayesian Learning. NLPRS 2001: 701-707

Coauthor Index

1	Tore Amble	[8]
2	Sophia Ananiadou	[6] [14] [16] [17] [18] [19] [20] [21] [22] [23]
3	Takashi Chikayama	[1]
4	Hong-Woo Chun	[9] [10]
5	Philip Cotter	[20]
6	Tadayoshi Hara	[13]
7	Teruyoshi Hishiki	[2] [9] [10]
8	Yoshinobu Kano	[21]
9	Jin-Dong Kim	[6] [9] [10] [13]
10	Katsuya Masuda	[11] [13]
11	Yuichiro Matsubayashi	[21]
12	John McNaught	[6] [14] [17] [18]
13	Yusuke Miyao	[11] [12] [13] [15] [21]
14	Naoki Nagata	[9] [10]
15	Ngan Nguyen	[21]
16	Takashi Ninomiya	[11] [13]
17	Chikashi Nobata	[20]
18	Osamu Ogasawara	[2]
19	Tomoko Ohta	[6] [11] [13]
20	Daisuke Okanohara	[12]
21	Naoaki Okazaki	[20] [22]
22	Kousaku Okubo	[2]
23	Brian Rea	[20]
24	Yutaka Sasaki	[18] [20]
25	Rune Sætre	[8] [21]
26	Rie Shiba	[9] [10]
27	Harald Søvik	[8]
28	Jumpei Takeuchi	[13]
29	Yuka Tateishi	[6]
30	Yuka Tateisi	[13]
31	Jun-ichi Tsujii	[3] [4] [5] [6] [7] [9] [10] [11] [12] [13] [14] [15] [16] [19] [20] [21] [22] [23]
32	Akane Yakushiji	[13]
33	Kazuhiro Yoshida	[11] [13] [15] [21]

Colors in the list of coauthors