Shoshana J. Wodak

	2009
19		James Vlasblom, Shoshana J. Wodak: Markov clustering versus affinity propagation for the partitioning of protein interaction graphs. BMC Bioinformatics 10: (2009)
	2008
18		Shuye Pu, Karen Ronen, James Vlasblom, Jack Greenblatt, Shoshana J. Wodak: Local coherence in genetic interaction patterns reveals prevalent functional versatility. Bioinformatics 24(20): 2376-2383 (2008)
17		Benoit H. Dessailly, Marc F. Lensink, Christine A. Orengo, Shoshana J. Wodak: LigASite - a database of biologically relevant binding sites in proteins with known apo-structures. Nucleic Acids Research 36(Database-Issue): 667-673 (2008)
	2007
16		Guillaume Launay, Raul Mendez, Shoshana J. Wodak, Thomas Simonson: Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets. BMC Bioinformatics 8: (2007)
15		Benoit H. Dessailly, Marc F. Lensink, Shoshana J. Wodak: Relating destabilizing regions to known functional sites in proteins. BMC Bioinformatics 8: (2007)
	2006
14		James Vlasblom, Samuel Wu, Shuye Pu, Mark Superina, Gina Liu, Chris Orsi, Shoshana J. Wodak: GenePro: a cytoscape plug-in for advanced visualization and analysis of interaction networks. Bioinformatics 22(17): 2178-2179 (2006)
	2005
13		Ulrich Güldener, Martin Münsterkötter, Gabi Kastenmüller, Normann Strack, Jacques van Helden, Christian Lemer, J. Richelles, Shoshana J. Wodak, J. García-Martínez, J. E. Pérez-Ortín, Holger Michael, Andreas Kaps, E. Talla, Bernard Dujon, Bruno André, J. L. Souciet, J. De Montigny, E. Bon, C. Gaillardin, Hans-Werner Mewes: CYGD: the Comprehensive Yeast Genome Database. Nucleic Acids Research 33(Database-Issue): 364-368 (2005)
12		Didier Croes, Fabian Couche, Shoshana J. Wodak, Jacques van Helden: Metabolic PathFinding: inferring relevant pathways in biochemical networks. Nucleic Acids Research 33(Web-Server-Issue): 326-330 (2005)
	2004
11		N. Simonis, Shoshana J. Wodak, G. N. Cohen, Jacques van Helden: Combining pattern discovery and discriminant analysis to predict gene co-regulation. Bioinformatics 20(15): 2370-2379 (2004)
10		Christian Lemer, Erick Antezana, Fabian Couche, Frédéric Fays, Xavier Santolaria, Rekin's Janky, Yves Deville, Jean Richelle, Shoshana J. Wodak: The aMAZE LightBench: a web interface to a relational database of cellular processes. Nucleic Acids Research 32(Database-Issue): 443-448 (2004)
9		Raphaël Leplae, Aline Hebrant, Shoshana J. Wodak, Ariane Toussaint: ACLAME: A CLAssification of Mobile genetic Elements. Nucleic Acids Research 32(Database-Issue): 45-49 (2004)
	2003
8		Yves Deville, David Gilbert, Jacques van Helden, Shoshana J. Wodak: An Overview of Data Models for the Analysis of Biochemical Pathways. CMSB 2003: 174
7		Yves Deville, David Gilbert, Jacques van Helden, Shoshana J. Wodak: An overview of data models for the analysis of biochemical pathways. Briefings in Bioinformatics 4(3): 246-259 (2003)
	2002
6		Maria Elena Ochagavia, Jean Richelle, Shoshana J. Wodak: Advanced pairwise structure alignments of proteins and analysis of conformational changes. Bioinformatics 18(4): 637-640 (2002)
	2001
5		Jacques van Helden, Avi Naim, Christian Lemer, Renato Mancuso, Matthew Eldridge, Shoshana J. Wodak: From Molecular Activities and Processes to Biological Function. Briefings in Bioinformatics 2(1): 81-107 (2001)
	2000
4		Jacques van Helden, David Gilbert, Lorenz Wernisch, Michael Schroeder, Shoshana J. Wodak: Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data. JOBIM 2000: 147-164
	1999
3		Jacques van Helden, David Gilbert, Lorenz Wernisch, Renato Mancuso, Matthew Eldridge, Kirill Degtyarenko, Shoshana J. Wodak: Logical Tools for Quering and Assisting Annotation of a Biochemical Pathway Database. German Conference on Bioinformatics 1999: 227-229
	1997
2		Shoshana J. Wodak: Molecular Systematics in Three Dimensions. German Conference on Bioinformatics 1997: 21
	1995
1		Christopher J. Rawlings, Dominic A. Clark, Russ B. Altman, Lawrence Hunter, Thomas Lengauer, Shoshana J. Wodak: Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995 AAAI 1995

Coauthor Index

1	Russ B. Altman	[1]
2	Bruno André	[13]
3	Erick Antezana	[10]
4	E. Bon	[13]
5	Dominic A. Clark	[1]
6	G. N. Cohen	[11]
7	Fabian Couche	[10] [12]
8	Didier Croes	[12]
9	Kirill Degtyarenko	[3]
10	Benoit H. Dessailly	[15] [17]
11	Yves Deville	[7] [8] [10]
12	Bernard Dujon	[13]
13	Matthew Eldridge	[3] [5]
14	Frédéric Fays	[10]
15	C. Gaillardin	[13]
16	J. García-Martínez	[13]
17	David Gilbert (David R. Gilbert)	[3] [4] [7] [8]
18	Jack Greenblatt	[18]
19	Ulrich Güldener	[13]
20	Aline Hebrant	[9]
21	Jacques van Helden	[3] [4] [5] [7] [8] [11] [12] [13]
22	Lawrence Hunter	[1]
23	Rekin's Janky	[10]
24	Andreas Kaps	[13]
25	Gabi Kastenmüller	[13]
26	Guillaume Launay	[16]
27	Christian Lemer	[5] [10] [13]
28	Thomas Lengauer	[1]
29	Marc F. Lensink	[15] [17]
30	Raphaël Leplae	[9]
31	Gina Liu	[14]
32	Renato Mancuso	[3] [5]
33	Raul Mendez	[16]
34	Hans-Werner Mewes	[13]
35	Holger Michael	[13]
36	J. De Montigny	[13]
37	Martin Münsterkötter	[13]
38	Avi Naim	[5]
39	Maria Elena Ochagavia	[6]
40	Christine A. Orengo	[17]
41	Chris Orsi	[14]
42	J. E. Pérez-Ortín	[13]
43	Shuye Pu	[14] [18]
44	Christopher J. Rawlings	[1]
45	Jean Richelle	[6] [10]
46	J. Richelles	[13]
47	Karen Ronen	[18]
48	Xavier Santolaria	[10]
49	Michael Schroeder	[4]
50	N. Simonis	[11]
51	Thomas Simonson	[16]
52	J. L. Souciet	[13]
53	Normann Strack	[13]
54	Mark Superina	[14]
55	E. Talla	[13]
56	Ariane Toussaint	[9]
57	James Vlasblom	[14] [18] [19]
58	Lorenz Wernisch	[3] [4]
59	Samuel Wu	[14]

Colors in the list of coauthors