| 2009 | ||
|---|---|---|
| 43 | Alexandra Shulman-Peleg, Ruth Nussinov, Haim J. Wolfson: RsiteDB: a database of protein binding pockets that interact with RNA nucleotide bases. Nucleic Acids Research 37(Database-Issue): 369-373 (2009) | |
| 2008 | ||
| 42 | Dina Schneidman-Duhovny, Oranit Dror, Yuval Inbar, Ruth Nussinov, Haim J. Wolfson: Deterministic Pharmacophore Detection via Multiple Flexible Alignment of Drug-Like Molecules. Journal of Computational Biology 15(7): 737-754 (2008) | |
| 41 | Eitan Yaffe, Dan Fishelovitch, Haim J. Wolfson, Dan Halperin, Ruth Nussinov: MolAxis: a server for identification of channels in macromolecules. Nucleic Acids Research 36(Web-Server-Issue): 210-215 (2008) | |
| 40 | Dina Schneidman-Duhovny, Oranit Dror, Yuval Inbar, Ruth Nussinov, Haim J. Wolfson: PharmaGist: a webserver for ligand-based pharmacophore detection. Nucleic Acids Research 36(Web-Server-Issue): 223-228 (2008) | |
| 39 | Efrat Mashiach, Dina Schneidman-Duhovny, Nelly Andrusier, Ruth Nussinov, Haim J. Wolfson: FireDock: a web server for fast interaction refinement in molecular docking. Nucleic Acids Research 36(Web-Server-Issue): 229-232 (2008) | |
| 38 | Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson: MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions. Nucleic Acids Research 36(Web-Server-Issue): 260-264 (2008) | |
| 2007 | ||
| 37 | Yuval Inbar, Dina Schneidman-Duhovny, Oranit Dror, Ruth Nussinov, Haim J. Wolfson: Deterministic Pharmacophore Detection Via Multiple Flexible Alignment of Drug-Like Molecules. RECOMB 2007: 412-429 | |
| 36 | Keren Lasker, Oranit Dror, Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson: EMatch: Discovery of High Resolution Structural Homologues of Protein Domains in Intermediate Resolution Cryo-EM Maps. IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 28-39 (2007) | |
| 2006 | ||
| 35 | Gilad Wainreb, Nurit Haspel, Haim J. Wolfson, Ruth Nussinov: A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly. Bioinformatics 22(11): 1343-1352 (2006) | |
| 34 | Maxim Shatsky, Alexandra Shulman-Peleg, Ruth Nussinov, Haim J. Wolfson: The Multiple Common Point Set Problem and Its Application to Molecule Binding Pattern Detection. Journal of Computational Biology 13(2): 407-428 (2006) | |
| 33 | Oranit Dror, Ruth Nussinov, Haim J. Wolfson: The ARTS web server for aligning RNA tertiary structures. Nucleic Acids Research 34(Web-Server-Issue): 412-415 (2006) | |
| 2005 | ||
| 32 | Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson: MAPPIS: Multiple 3D Alignment of Protein-Protein Interfaces. CompLife 2005: 91-103 | |
| 31 | Oranit Dror, Ruth Nussinov, Haim J. Wolfson: ARTS: alignment of RNA tertiary structures. ECCB/JBI 2005: 53 | |
| 30 | Maxim Shatsky, Alexandra Shulman-Peleg, Ruth Nussinov, Haim J. Wolfson: Recognition of Binding Patterns Common to a Set of Protein Structures. RECOMB 2005: 440-455 | |
| 29 | Keren Lasker, Oranit Dror, Ruth Nussinov, Haim J. Wolfson: Discovery of Protein Substructures in EM Maps. WABI 2005: 423-434 | |
| 28 | Yuval Inbar, Haim J. Wolfson, Ruth Nussinov: Multiple Docking for Protein Structure Prediction. I. J. Robotic Res. 24(2-3): 131-150 (2005) | |
| 27 | Alexandra Shulman-Peleg, Ruth Nussinov, Haim J. Wolfson: SiteEngines: recognition and comparison of binding sites and protein-protein interfaces. Nucleic Acids Research 33(Web-Server-Issue): 337-341 (2005) | |
| 26 | Dina Schneidman-Duhovny, Yuval Inbar, Ruth Nussinov, Haim J. Wolfson: PatchDock and SymmDock: servers for rigid and symmetric docking. Nucleic Acids Research 33(Web-Server-Issue): 363-367 (2005) | |
| 2004 | ||
| 25 | Alexandra Shulman-Peleg, Shira Mintz, Ruth Nussinov, Haim J. Wolfson: Protein-Protein Interfaces: Recognition of Similar Spatial and Chemical Organizations. WABI 2004: 194-205 | |
| 24 | Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson: FlexProt: Alignment of Flexible Protein Structures Without a Predefinition of Hinge Regions. Journal of Computational Biology 11(1): 83-106 (2004) | |
| 23 | Maxim Shatsky, Oranit Dror, Dina Schneidman-Duhovny, Ruth Nussinov, Haim J. Wolfson: BioInfo3D: a suite of tools for structural bioinformatics. Nucleic Acids Research 32(Web-Server-Issue): 503-507 (2004) | |
| 2003 | ||
| 22 | Yuval Inbar, Hadar Benyamini, Ruth Nussinov, Haim J. Wolfson: Protein structure prediction via combinatorial assembly of sub-structural units. ISMB (Supplement of Bioinformatics) 2003: 158-168 | |
| 21 | Oranit Dror, Hadar Benyamini, Ruth Nussinov, Haim J. Wolfson: MASS: multiple structural alignment by secondary structures. ISMB (Supplement of Bioinformatics) 2003: 95-104 | |
| 20 | Haim J. Wolfson: Spatial Pattern Detection in Structural Bioinformatics. Mathematical Methods for Protein Structure Analysis and Design 2003: 35-56 | |
| 2002 | ||
| 19 | Dina Duhovny, Ruth Nussinov, Haim J. Wolfson: Efficient Unbound Docking of Rigid Molecules. WABI 2002: 185-200 | |
| 18 | Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson: MultiProt - A Multiple Protein Structural Alignment Algorithm. WABI 2002: 235-250 | |
| 2001 | ||
| 17 | Sandeep Kumar, Haim J. Wolfson, Ruth Nussinov: Protein flexibility and electrostatic interactions. IBM Journal of Research and Development 45(3): 499-512 (2001) | |
| 16 | Chung-Jung Tsai, Buyong Ma, Yuk Yin Sham, Sandeep Kumar, Haim J. Wolfson, Ruth Nussinov: A hierarchical, building-block-based computational scheme for protein structure prediction. IBM Journal of Research and Development 45(3): 513-524 (2001) | |
| 15 | Nathaniel Leibowitz, Ruth Nussinov, Haim J. Wolfson: MUSTA - A General, Efficient, Automated Method for Multiple Structure Alignment and Detection of Common Motifs: Application to Proteins. Journal of Computational Biology 8(2): 93-121 (2001) | |
| 2000 | ||
| 14 | Maxim Shatsky, Zipora Y. Fligelman, Ruth Nussinov, Haim J. Wolfson: Alignment of Flexible Protein Structures. ISMB 2000: 329-343 | |
| 1999 | ||
| 13 | Nathaniel Leibowitz, Zipora Y. Fligelman, Ruth Nussinov, Haim J. Wolfson: Multiple Structural Alignment and Core Detection by Geometric Hashing. ISMB 1999: 169-177 | |
| 1998 | ||
| 12 | Ruth Nussinov, Raquel Norel, Bilha Sandak, George Verbitsky, Haim J. Wolfson: [Invited Lecture] Structural motifs in the interior and on the surfaces of protein monomers and at protein-protein interfaces. German Conference on Bioinformatics 1998 | |
| 11 | Bilha Sandak, Ruth Nussinov, Haim J. Wolfson: A Method for Biomolecular Structural Recognition and Docking Allowing Conformational Flexibility. Journal of Computational Biology 5(4): 631-654 (1998) | |
| 1996 | ||
| 10 | Bilha Sandak, Ruth Nussinov, Haim J. Wolfson: Docking of Conformationally Flexible Proteins. CPM 1996: 271-287 | |
| 9 | Konstantin Y. Kupeev, Haim J. Wolfson: A new method of estimating shape similarity. Pattern Recognition Letters 17(8): 873-887 (1996) | |
| 1995 | ||
| 8 | Bilha Sandak, Ruth Nussinov, Haim J. Wolfson: An automated computer vision and robotics-based technique for 3-D flexible biomolecular docking and matching. Computer Applications in the Biosciences 11(1): 87-99 (1995) | |
| 7 | Daniel Reisfeld, Haim J. Wolfson, Yehezkel Yeshurun: Context-free attentional operators: The generalized symmetry transform. International Journal of Computer Vision 14(2): 119-130 (1995) | |
| 1993 | ||
| 6 | Daniel Fischer, Raquel Norel, Ruth Nussinov, Haim J. Wolfson: 3-D Docking of Protein Molecules. CPM 1993: 20-34 | |
| 1992 | ||
| 5 | Daniel Fischer, Ruth Nussinov, Haim J. Wolfson: 3-D Substructure Matching in Protein Molecules. CPM 1992: 136-150 | |
| 1991 | ||
| 4 | Haim J. Wolfson: Generalizing the generalized hough transform. Pattern Recognition Letters 12(8): 565-573 (1991) | |
| 1990 | ||
| 3 | Haim J. Wolfson: Model-Based Object Recognition by Geometric Hashing. ECCV 1990: 526-536 | |
| 2 | Eyal Kishon, Trevor Hastie, Haim J. Wolfson: 3-D Curve Matching Using Splines. ECCV 1990: 589-591 | |
| 1 | Haim J. Wolfson: On curve matching. IEEE Trans. Pattern Anal. Mach. Intell. 12(5): 483-489 (1990) | |