 | 2009 |
| 13 |  | Alexandre Gattiker,
Leandro Hermida,
Robin Liechti,
Ioannis Xenarios,
Olivier Collin,
Jacques Rougemont,
Michael Primig:
MIMAS 3.0 is a Multiomics Information Management and Annotation System.
BMC Bioinformatics 10: (2009) |
| 12 |  | Abhishek Garg,
Kartik Mohanram,
Alessandro Di Cara,
Giovanni De Micheli,
Ioannis Xenarios:
Modeling stochasticity and robustness in gene regulatory networks.
Bioinformatics 25(12): (2009) |
| 11 |  | Olivier Martin,
Armand Valsesia,
Amalio Telenti,
Ioannis Xenarios,
Brian J. Stevenson:
AssociationViewer: a scalable and integrated software tool for visualization of large-scale variation data in genomic context.
Bioinformatics 25(5): 662-663 (2009) |
| 10 |  | Alexandre Gattiker,
Christophe Dessimoz,
Adrian Schneider,
Ioannis Xenarios,
Marco Pagni,
Jacques Rougemont:
The Microbe browser for comparative genomics.
Nucleic Acids Research 37(Web-Server-Issue): 296-299 (2009) |
| 2008 |
| 9 |  | Jacques Rougemont,
Arnaud Amzallag,
Christian Iseli,
Laurent Farinelli,
Ioannis Xenarios,
Felix Naef:
Probabilistic base calling of Solexa sequencing data.
BMC Bioinformatics 9: (2008) |
| 8 |  | Abhishek Garg,
Alessandro Di Cara,
Ioannis Xenarios,
Luis Mendoza,
Giovanni De Micheli:
Synchronous versus asynchronous modeling of gene regulatory networks.
Bioinformatics 24(17): 1917-1925 (2008) |
| 7 |  | Sébastien Moretti,
Andreas Wilm,
Desmond G. Higgins,
Ioannis Xenarios,
Cédric Notredame:
R-Coffee: a web server for accurately aligning noncoding RNA sequences.
Nucleic Acids Research 36(Web-Server-Issue): 10-13 (2008) |
| 2007 |
| 6 |  | Abhishek Garg,
Ioannis Xenarios,
Luis Mendoza,
Giovanni De Micheli:
An Efficient Method for Dynamic Analysis of Gene Regulatory Networks and in silico Gene Perturbation Experiments.
RECOMB 2007: 62-76 |
| 5 |  | Alessandro Di Cara,
Abhishek Garg,
Giovanni De Micheli,
Ioannis Xenarios,
Luis Mendoza:
Dynamic simulation of regulatory networks using SQUAD.
BMC Bioinformatics 8: (2007) |
| 2002 |
| 4 |  | Ioannis Xenarios,
Lukasz Salwínski,
Xiaoqun Joyce Duan,
Patrick Higney,
Sul-Min Kim,
David Eisenberg:
DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions.
Nucleic Acids Research 30(1): 303-305 (2002) |
| 2001 |
| 3 |  | Edward M. Marcotte,
Ioannis Xenarios,
David Eisenberg:
Mining literature for protein-protein interactions.
Bioinformatics 17(4): 359-363 (2001) |
| 2 |  | Ioannis Xenarios,
Esteban Fernandez,
Lukasz Salwínski,
Xiaoqun Joyce Duan,
Michael J. Thompson,
Edward M. Marcotte,
David Eisenberg:
DIP: The Database of Interacting Proteins: 2001 update.
Nucleic Acids Research 29(1): 239-241 (2001) |
| 2000 |
| 1 |  | Ioannis Xenarios,
Danny W. Rice,
Lukasz Salwínski,
Marisa K. Baron,
Edward M. Marcotte,
David Eisenberg:
DIP: the Database of Interacting Proteins.
Nucleic Acids Research 28(1): 289-291 (2000) |