 | 2009 |
|---|
| 74 |       | Gerold Jäger,
Sharlee Climer,
Weixiong Zhang:
Complete Parsimony Haplotype Inference Problem and Algorithms.
ESA 2009: 337-348 |
| 73 | | Yixin Chen,
Ruoyun Huang,
Zhao Xing,
Weixiong Zhang:
Long-distance mutual exclusion for planning.
Artif. Intell. 173(2): 365-391 (2009) |
| 72 | | Sharlee Climer,
Gerold Jäger,
Alan R. Templeton,
Weixiong Zhang:
How frugal is mother nature with haplotypes?
Bioinformatics 25(1): 68-74 (2009) |
| 2008 |
|---|
| 71 |  | Yixin Chen,
Ruoyun Huang,
Weixiong Zhang:
Fast Planning by Search in Domain Transition Graph.
AAAI 2008: 886-891 |
| 70 | | Yunpen Xu,
Xuefeng Zhou,
Weixiong Zhang:
MicroRNA prediction with a novel ranking algorithm based on random walks.
ISMB 2008: 50-58 |
| 2007 |
|---|
| 69 | | Monika Ray,
Sekhar Dharmarajan,
Johannes Freudenberg,
G. Alexander Patterson,
Weixiong Zhang:
Gene expression profiling and machine learning to understand and predict primary graft dysfunction.
BIBE 2007: 1076-1080 |
| 68 | | Jianhua Ruan,
Weixiong Zhang:
An Efficient Spectral Algorithm for Network Community Discovery and Its Applications to Biological and Social Networks.
ICDM 2007: 643-648 |
| 67 | | Yixin Chen,
Zhao Xing,
Weixiong Zhang:
Long-Distance Mutual Exclusion for Propositional Planning.
IJCAI 2007: 1840-1845 |
| 66 | | Huazong Zeng,
Lijun Luo,
Weixiong Zhang,
Jie Zhou,
Zuofeng Li,
Hongyan Liu,
Tiansheng Zhu,
Xiangqian Feng,
Yang Zhong:
PlantQTL-GE: a database system for identifying candidate genes in rice and Arabidopsis by gene expression and QTL information.
Nucleic Acids Research 35(Database-Issue): 879-882 (2007) |
| 2006 |
|---|
| 65 | | Jianhua Ruan,
Weixiong Zhang:
Identification and Evaluation of Weak Community Structures in Networks.
AAAI 2006 |
| 64 | | Zhao Xing,
Yixin Chen,
Weixiong Zhang:
An Efficient Hybrid Strategy for Temporal Planning.
CPAIOR 2006: 273-287 |
| 63 | | Zhao Xing,
Yixin Chen,
Weixiong Zhang:
Optimal STRIPS Planning by Maximum Satisfiability and Accumulative Learning.
ICAPS 2006: 442-446 |
| 62 | | Weixiong Zhang:
Data Mining Methods for Modeling Gene Expression Regulation and Their Applications.
ICDM 2006: 7 |
| 61 | | Jianhua Ruan,
Weixiong Zhang:
Identification and Evaluation of Functional Modules in Gene Co-expression Networks.
Systems Biology and Computational Proteomics 2006: 57-76 |
| 60 | | Sharlee Climer,
Weixiong Zhang:
Cut-and-solve: An iterative search strategy for combinatorial optimization problems.
Artif. Intell. 170(8-9): 714-738 (2006) |
| 59 | | Jianhua Ruan,
Weixiong Zhang:
A bi-dimensional regression tree approach to the modeling of gene expression regulation.
Bioinformatics 22(3): 332-340 (2006) |
| 58 | | Sharlee Climer,
Weixiong Zhang:
Rearrangement Clustering: Pitfalls, Remedies, and Applications.
Journal of Machine Learning Research 7: 919-943 (2006) |
| 2005 |
|---|
| 57 | | Weixiong Zhang,
Moshe Looks:
A Novel Local Search Algorithm for the Traveling Salesman Problem that Exploits Backbones.
IJCAI 2005: 343-350 |
| 56 | | Xuefeng Zhou,
Jianhua Ruan,
Guandong Wang,
Weixiong Zhang:
Computational Characterization and Identification of Core Promoters of MicroRNA Genes in C. elegans , H. sapiens and A. thaliana.
Systems Biology and Regulatory Genomics 2005: 235-248 |
| 55 | | Guandong Wang,
Weixiong Zhang:
Build a Dictionary, Learn a Grammar, Decipher Stegoscripts, and Discover Genomic Regulatory Elements.
Systems Biology and Regulatory Genomics 2005: 80-94 |
| 54 | | Weixiong Zhang,
Guandong Wang,
Zhao Xing,
Lars Wittenburg:
Distributed stochastic search and distributed breakout: properties, comparison and applications to constraint optimization problems in sensor networks.
Artif. Intell. 161(1-2): 55-87 (2005) |
| 53 | | Zhao Xing,
Weixiong Zhang:
MaxSolver: An efficient exact algorithm for (weighted) maximum satisfiability.
Artif. Intell. 164(1-2): 47-80 (2005) |
| 52 | | Jianhua Ruan,
Weixiong Zhang:
CAGER: classification analysis of gene expression regulation using multiple information sources.
BMC Bioinformatics 6: 114 (2005) |
| 51 | | Weixiong Zhang,
Jianhua Ruan,
Tuan-hua David Ho,
Youngsook You,
Taotao Yu,
Ralph S. Quatrano:
Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana.
Bioinformatics 21(14): 3074-3081 (2005) |
| 50 | | Richard E. Korf,
Weixiong Zhang,
Ignacio Thayer,
Heath Hohwald:
Frontier search.
J. ACM 52(5): 715-748 (2005) |
| 49 | | Guandong Wang,
Taotao Yu,
Weixiong Zhang:
WordSpy: identifying transcription factor binding motifs by building a dictionary and learning a grammar.
Nucleic Acids Research 33(Web-Server-Issue): 412-416 (2005) |
| 2004 |
|---|
| 48 | | Zhao Xing,
Weixiong Zhang:
Efficient Strategies for (Weighted) Maximum Satisfiability.
CP 2004: 690-705 |
| 47 | | Sharlee Climer,
Weixiong Zhang:
A Linear Search Strategy using Bounds.
ICAPS 2004: 132-141 |
| 46 | | Weixiong Zhang,
Xiaotao Zhang:
An Improved Integer Local Search for Complex Scheduling Problems.
ICAPS 2004: 83-91 |
| 45 | | Sharlee Climer,
Weixiong Zhang:
Take a walk and cluster genes: a TSP-based approach to optimal rearrangement clustering.
ICML 2004 |
| 44 | | Weixiong Zhang,
Xiaotao Zhang:
An Improved Integer Local Search for Complex Scheduling Problems.
KR 2004: 692-700 |
| 43 | | Jeremy Buhler,
Richard Souvenir,
Weixiong Zhang,
Rob Mitra:
Design of a High-Throughput Assay for Alternative Splicing Using Polymerase Colonies.
Pacific Symposium on Biocomputing 2004: 5-16 |
| 42 | | Anup K. Sen,
Amitava Bagchi,
Weixiong Zhang:
Average-case analysis of best-first search in two representative directed acyclic graphs.
Artif. Intell. 155(1-2): 183-206 (2004) |
| 41 | | Weixiong Zhang:
Configuration landscape analysis and backbone guided local search: Part I: Satisfiability and maximum satisfiability.
Artif. Intell. 158(1): 1-26 (2004) |
| 40 | | Jianhua Ruan,
Gary D. Stormo,
Weixiong Zhang:
An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots.
Bioinformatics 20(1): 58-66 (2004) |
| 39 | | Weixiong Zhang:
Phase Transitions and Backbones of the Asymmetric Traveling Salesman Problem.
J. Artif. Intell. Res. (JAIR) 21: 471-497 (2004) |
| 38 | | Jianhua Ruan,
Gary D. Stormo,
Weixiong Zhang:
ILM: a web server for predicting RNA secondary structures with pseudoknots.
Nucleic Acids Research 32(Web-Server-Issue): 146-149 (2004) |
| 2003 |
|---|
| 37 | | Lars Wittenburg,
Weixiong Zhang:
Distributed breakout algorithm for distributed constraint optimization problems -- DBArelax.
AAMAS 2003: 1158-1159 |
| 36 | | Weixiong Zhang,
Zhao Xing,
Guandong Wang,
Lars Wittenburg:
An analysis and application of distributed constraint satisfaction and optimization algorithms in sensor networks.
AAMAS 2003: 185-192 |
| 35 | | Jianhua Ruan,
Gary D. Stormo,
Weixiong Zhang:
An Iterative Loop Matching Approach to the Prediction of RNA Secondary Stru.
CSB 2003: 519-520 |
| 34 | | Weixiong Zhang:
Phase Transitions, Backbones and Heuristic Search.
ICTAI 2003 |
| 33 | | Weixiong Zhang,
Ananda Rangan,
Moshe Looks:
Backbone Guided Local Search for Maximum Satisfiability.
IJCAI 2003: 1179-1186 |
| 32 | | Weixiong Zhang:
Phase Transitions of the Asymmetric Traveling Salesman.
IJCAI 2003: 1202-1210 |
| 31 | | Richard Souvenir,
Jeremy Buhler,
Gary D. Stormo,
Weixiong Zhang:
Selecting Degenerate Multiplex PCR Primers.
WABI 2003: 512-526 |
| 2002 |
|---|
| 30 | | Weixiong Zhang,
Lars Wittenburg:
Distributed Breakout Revisited.
AAAI/IAAI 2002: 352- |
| 29 | | Sharlee Climer,
Weixiong Zhang:
Searching for Backbones and Fat: A Limit-Crossing Approach with Applications.
AAAI/IAAI 2002: 707-712 |
| 28 | | Anup K. Sen,
Amitava Bagchi,
Weixiong Zhang:
An Average-Case Analysis of Graph Search.
AAAI/IAAI 2002: 757- |
| 27 | | Weixiong Zhang,
Zhidong Deng,
Guandong Wang,
Lars Wittenburg,
Zhao Xing:
Distributed problem solving in sensor networks.
AAMAS 2002: 988-989 |
| 2001 |
|---|
| 26 | | Jill Cirasella,
David S. Johnson,
Lyle A. McGeoch,
Weixiong Zhang:
The Asymmetric Traveling Salesman Problem: Algorithms, Instance Generators, and Tests.
ALENEX 2001: 32-59 |
| 25 | | Weixiong Zhang:
Phase Transitions and Backbones of 3-SAT and Maximum 3-SAT.
CP 2001: 153-167 |
| 24 | | Weixiong Zhang:
Iterative state-space reduction for flexible computation.
Artif. Intell. 126(1-2): 109-138 (2001) |
| 23 | | Weixiong Zhang,
Rina Dechter,
Richard E. Korf:
Heuristic search in artificial intelligence.
Artif. Intell. 129(1-2): 1-4 (2001) |
| 2000 |
|---|
| 22 | | Richard E. Korf,
Weixiong Zhang:
Divide-and-Conquer Frontier Search Applied to Optimal Sequence Alignment.
AAAI/IAAI 2000: 910-916 |
| 21 | | Weixiong Zhang:
Depth-First Branch-and-Bound versus Local Search: A Case Study.
AAAI/IAAI 2000: 930-935 |
| 20 | | Weixiong Zhang,
Randal W. Hill Jr.:
A template-based and pattern-driven approach to situation awareness and assessment in virtual humans.
Agents 2000: 116-123 |
| 19 | | Weixiong Zhang:
Association-Based Multiple Imputation in Multivariate Datasets: A Summary.
ICDE 2000: 310 |
| 18 | | Hyuckchul Jung,
Milind Tambe,
Weixiong Zhang,
Wei-Min Shen:
Towards Large-Scale Conflict Resolution: Initial Results.
ICMAS 2000: 403-404 |
| 17 | | David J. Musliner,
Barney Pell,
Wolff Dobson,
Kai Goebel,
Gautam Biswas,
Sheila A. McIlraith,
Giuseppina C. Gini,
Sven Koenig,
Shlomo Zilberstein,
Weixiong Zhang:
Reports on the AAAI Spring Symposia (March 1999).
AI Magazine 21(2): 79-84 (2000) |
| 16 | | Milind Tambe,
Weixiong Zhang:
Towards Flexible Teamwork in Persistent Teams: Extended Report.
Autonomous Agents and Multi-Agent Systems 3(2): 159-183 (2000) |
| 1998 |
|---|
| 15 | | Yigal Arens,
Weixiong Zhang,
Yongwon Lee,
Jon Dukes-Schlossberg,
Marc Zev:
Warfighter's Information Packager.
AAAI/IAAI 1998: 1095-1100 |
| 14 | | Weixiong Zhang:
Complete Anytime Beam Search.
AAAI/IAAI 1998: 425-430 |
| 13 | | Milind Tambe,
Weixiong Zhang:
Towards Flexible Teamwork in Persistent Teams.
ICMAS 1998: 277-284 |
| 1996 |
|---|
| 12 | | Weixiong Zhang:
Forward Estimation for Game-Tree Search.
AAAI/IAAI, Vol. 1 1996: 240-245 |
| 11 | | Weixiong Zhang,
Richard E. Korf:
A Study of Complexity Transitions on the Asymmetric Traveling Salesman Problem.
Artif. Intell. 81(1-2): 223-239 (1996) |
| 10 | | Joseph C. Pemberton,
Weixiong Zhang:
Epsilon-Transformation: Exploiting Phase Transitions to Solve Combinatorial Optimization Problems.
Artif. Intell. 81(1-2): 297-325 (1996) |
| 1995 |
|---|
| 9 | | Weixiong Zhang,
Richard E. Korf:
Performance of Linear-Space Search Algorithms.
Artif. Intell. 79(2): 241-292 (1995) |
| 1994 |
|---|
| 8 | | Weixiong Zhang,
Joseph C. Pemberton:
Epsilon-Transformation: Exploiting Phase Transitions to Solve Combinatorial Optimization Problems Initial Results.
AAAI 1994: 895-900 |
| 7 | | Weixiong Zhang,
Richard E. Korf:
Parallel Heap Operations on an EREW PRAM.
J. Parallel Distrib. Comput. 20(2): 248-255 (1994) |
| 1993 |
|---|
| 6 | | Weixiong Zhang,
Richard E. Korf:
Depth-First vs. Best-First Search: New Results.
AAAI 1993: 769-775 |
| 1992 |
|---|
| 5 | | Weixiong Zhang,
Richard E. Korf:
An Average-Case Analysis of Branch-and-Bound with Applications: Summary of Results.
AAAI 1992: 545-550 |
| 4 | | Weixiong Zhang,
Richard E. Korf:
Parallel Heap Operations on EREW PRAM: Summary of Results.
IPPS 1992: 315-318 |
| 1991 |
|---|
| 3 | | Weixiong Zhang,
Nageswara S. V. Rao:
Optimal Parallel Quicksort on Erew Pram.
BIT 31(1): 69-74 (1991) |
| 2 | | Nageswara S. V. Rao,
Weixiong Zhang:
Building Heaps in Parallel.
Inf. Process. Lett. 37(6): 355-358 (1991) |
| 1989 |
|---|
| 1 | | Weixiong Zhang:
A Software System for Robot Programming.
IAS 1989: 219-229 |
