Biosystems, Volume 90
Volume 90, Number 1, July - August 2007
Vivek K. Mutalik, K. V. Venkatesh: A theoretical steady state analysis indicates that induction of Escherichia coli glnALG operon can display all-or-none behavior. 1-19- Bin-Guang Ma: How to describe genes: Enlightenment from the quaternary number system. 20-27
- Wentao Ma, Chunwu Yu, Wentao Zhang: Monte Carlo simulation of early molecular evolution in the RNA World. 28-39
- Swetlana Nikolajewa, Maik Friedel, Thomas Wilhelm: Boolean networks with biologically relevant rules show ordered behavior. 40-47
- Jean-Philippe Thivierge, Evan Balaban: Getting into shape: Optimal ligand gradients for axonal guidance. 61-77
- Hui-Ling Huang, Chong-Cheng Lee, Shinn-Ying Ho: Selecting a minimal number of relevant genes from microarray data to design accurate tissue classifiers. 78-86
- S. Pal, Samrat Chatterjee, J. Chattopadhyay: Role of toxin and nutrient for the occurrence and termination of plankton bloom - Results drawn from field observations and a mathematical model. 87-100
- Kazushi Murakoshi, Yuichi Sato: Reducing topological defects in self-organizing maps using multiple scale neighborhood functions. 101-104
- Jun Tanimoto, Hiroki Sagara: Relationship between dilemma occurrence and the existence of a weakly dominant strategy in a two-player symmetric game. 105-114
- Yoko Nomura, Yohei Yokobayashi: Dual selection of a genetic switch by a single selection marker. 115-120
- Richard M. P. Sayer: Self-organizing proto-replicators and the origin of life. 121-138
- Kunio Kawamura: Civilization as a biosystem examined by the comparative analysis of biosystems. 139-150
- Bhaskar DasGupta, German Andres Enciso, Eduardo D. Sontag, Yi Zhang: Algorithmic and complexity results for decompositions of biological networks into monotone subsystems. 161-178
- Yukako Nakayama, Koichi Kawahara, Takeru Hachiro, Yoshiko Yamauchi, Mitsuru Yoneyama: Possible involvement of ATP-purinoceptor signalling in the intercellular synchronization of intracellular Ca2+ oscillation in cultured cardiac myocytes. 179-187
- S. K. Das, D. Chakrabarty: The use of fish community structure as a measure of ecological degradation: A case study in two tropical rivers of India. 188-196
- Sungwon Jung, Kwang H. Lee, Doheon Lee: H-CORE: Enabling genome-scale Bayesian analysis of biological systems without prior knowledge. 197-210
- Diana Karlsson, Stefan Karlsson, Erik Gustafsson, Birgitta Henriques Normark, Patric Nilsson: Modeling the regulation of the competence-evoking quorum sensing network in Streptococcus pneumoniae. 211-223
- Atanas Todorov Atanasov: The linear allometric relationship between total metabolic energy per life span and body mass of mammals. 224-233
- Shinn-Ying Ho, Fu-Chieh Yu, Chia-Yun Chang, Hui-Ling Huang: Design of accurate predictors for DNA-binding sites in proteins using hybrid SVM-PSSM method. 234-241
- Che-Hsin Lin, Hsiao-Ping Cheng, Chang-Biau Yang, Chia-Ning Yang: Solving satisfiability problems using a novel microarray-based DNA computer. 242-252
- Tomoaki Kawaguchi, Hajime Honda: Unidirectional movement of an actin filament taking advantage of temperature gradients. 253-262
- Sidarta Ribeiro, Angelo Loula, Ivan E. de Araújo, Ricardo R. Gudwin, João Queiroz: Symbols are not uniquely human. 263-272
- Motohiko Hatakeyama, Ichiro Tsuda: Internal logic viewed from observation space: Theory and a case study. 273-286
Volume 90, Number 2, September - October 2007
- David Ian Wimpenny, Adam Moroz: On allosteric control model of bone turnover cycle containing osteocyte regulation loop. 295-308
- D. Chakrabarty, S. K. Das: Bioturbation-induced phosphorous release from an insoluble phosphate source. 309-313
- S.-H. Lee, N.-Y. Su, P. Bardunias, H.-F. Li: Food encounter rate of simulated termite tunnels in heterogeneous landscapes. 314-322
- Siren R. Veflingstad, Erik Plahte: Analysis of gene regulatory network models with graded and binary transcriptional responses. 323-339
- Abir U. Igamberdiev: Physical limits of computation and emergence of life. 340-349
- Hong Zhang, Jianjun Jiao, Lansun Chen: Pest management through continuous and impulsive control strategies. 350-361
- Takaaki Kamatani, Tetsuya Yamamoto: Comparison of codon usage and tRNAs in mitochondrial genomes of Candida species. 362-370
- Shovonlal Roy, J. Chattopadhyay: Enrichment and stability: A phenomenological coupling of energy value and carrying capacity. 371-378
- E. Manjarrez, Pablo Balenzuela, Jordi García-Ojalvo, E. E. Vásquez, Lourdes Martínez, A. Flores, Claudio R. Mirasso: Phantom reflexes: Muscle contractions at a frequency not physically present in the input stimuli. 379-388
- Eugenio Andrade: A semiotic framework for evolutionary and developmental biology. 389-404
- Wen-Lin Huang, Hung-Ming Chen, Shiow-Fen Hwang, Shinn-Ying Ho: Accurate prediction of enzyme subfamily class using an adaptive fuzzy k-nearest neighbor method. 405-413
- Koya Mori, Rintaro Saito, Shinichi Kikuchi, Masaru Tomita: Inferring rules of Escherichia coli translational efficiency using an artificial neural network. 414-420
- Bin Yan, Derek R. Lovley, Julia Krushkal: Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens. 421-441
- Kantaro Fujiwara, Hiroki Fujiwara, Minoru Tsukada, Kazuyuki Aihara: Reproducing bursting interspike interval statistics of the gustatory cortex. 442-448
- Hiroaki Mizuno, Azusa Hamada, Katsuhiko Shimada, Hajime Honda: Tropomyosin as a regulator of the sliding movement of actin filaments. 449-455
- Russell W. Anderson, Christopher Stomberg, Charles W. Hahm, Venkatesh Mani, Daniel D. Samber, Vitalii V. Itskovich, Laura Valera-Guallar, John T. Fallon, Pavel B. Nedanov, Joel Huizenga, Zahi A. Fayad: Automated classification of atherosclerotic plaque from magnetic resonance images using predictive models. 456-466
- Daniel E. Bentil, Osei M. Bonsu, Christopher D. Ellingwood, James P. Hoffmann: Analysis of a Schnute postulate-based unified growth model for model selection in evolutionary computations. 467-474
- Sumedha, Olivier C. Martin, Andreas Wagner: New structural variation in evolutionary searches of RNA neutral networks. 475-485
- Hiroshi Yoshida, Hirokazu Anai, Katsuhisa Horimoto: Derivation of rigorous conditions for high cell-type diversity by algebraic approach. 486-495
- Gerhard Werner: Metastability, criticality and phase transitions in brain and its models. 496-508
- M. Broom, P. Nouvellet, J. P. Bacon, D. Waxman: Parameter-free testing of the shape of a probability distribution. 509-515
- Hui-Ling Huang, Fang-Lin Chang: ESVM: Evolutionary support vector machine for automatic feature selection and classification of microarray data. 516-528
- Sharareh Dariani, Mansoor Keshavarz, Mohsen Parviz, Mohammad Reza Raoufy, Shahriar Gharibzadeh: Modeling force-velocity relation in skeletal muscle isotonic contraction using an artificial neural network. 529-534
- Peter C. Y. Chen, Jeremy W. Chen: A Markovian approach to the control of genetic regulatory networks. 535-545
- Henry C. Tuckwell, Laurent Toubiana: Dynamical modeling of viral spread in spatially distributed populations: stochastic origins of oscillations and density dependence. 546-559
- Renbin Xiao, Yichun Xu, Martyn Amos: Two hybrid compaction algorithms for the layout optimization problem. 560-567
- Jun Tanimoto: Differences in dynamics between discrete strategies and continuous strategies in a multi-player game with a linear payoff structure. 568-572
- Wen-Lin Huang, Chun-Wei Tung, Hui-Ling Huang, Shiow-Fen Hwang, Shinn-Ying Ho: ProLoc: Prediction of protein subnuclear localization using SVM with automatic selection from physicochemical composition features. 573-581
Volume 90, Number 3, November - December 2007
- Thomas Eißing, Steffen Waldherr, Frank Allgöwer, Peter Scheurich, Eric Bullinger: Steady state and (bi-) stability evaluation of simple protease signalling networks. 591-601
- A. Carlos O. Ferraz, Gauri S. Mittal, Walter K. Bilanski, Hussein A. Abdullah: Mathematical modeling of laser based potato cutting and peeling. 602-613
- Tadashi Yamada, Chikara Furusawa, Keisuke Nagahisa, Akiko Kashiwagi, Tetsuya Yomo, Hiroshi Shimizu: Analysis of fluctuation in protein abundance without promoter regulation based on Escherichia coli continuous culture. 614-622
- Tessa E. Pronk, Andy D. Pimentel, Marco Roos, Timo M. Breit: Taking the example of computer systems engineering for the analysis of biological cell systems. 623-635
- Subodh B. Rawool, K. V. Venkatesh: Steady state approach to model gene regulatory networks - Simulation of microarray experiments. 636-655
- Andrei Khrennikov: Toward an adequate mathematical model of mental space: Conscious/unconscious dynamics on m-adic trees. 656-675
- Ali Tiraihi, Taki Tiraihi: Early onset of regionalization in EMS lineage of C. elegans embryo: A quantitative study. 676-686
- Marc García-Arnau, Daniel Manrique, Alfonso Rodríguez-Patón, Petr Sosík: A P system and a constructive membrane-inspired DNA algorithm for solving the Maximum Clique Problem. 687-697
- Jin-Peng Qi, Shi-Huang Shao, Jinli Xie, Y. Zhu: A mathematical model of P53 gene regulatory networks under radiotherapy. 698-706
- Takeru Hachiro, Koichi Kawahara, Rie Sato, Yoshiko Yamauchi, Daisuke Matsuyama: Changes in the fluctuation of the contraction rhythm of spontaneously beating cardiac myocytes in cultures with and without cardiac fibroblasts. 707-715
- Taichi Haruna, Yukio-Pegio Gunji: Duality between decomposition and gluing: A theoretical biology via adjoint functors. 716-727
- Jun Tanimoto, Hiroki Sagara: A study on emergence of alternating reciprocity in a 2 × 2 game with 2-length memory strategy. 728-737
- Konrad Szacilowski: Biomedical implications of information processing in chemical systems: Non-classical approach to photochemistry of coordination compounds. 738-749
- Sungho Jo: A neurobiological model of the recovery strategies from perturbed walking. 750-768
- Koji Sawa, Yukio-Pegio Gunji: Dialogue and causality: Global description from local observations and vague communications. 783-791
- Anand Anbarasu, Sudha Anand, Sethumadhavan Rao: Investigations on unconventional hydrogen bonds in RNA binding proteins: The role of CH..O=C interactions. 792-801
- S.-H. Lee, P. Bardunias, N.-Y. Su: Optimal length distribution of termite tunnel branches for efficient food search and resource transportation. 802-807
- Sunita Gakkhar, Brahampal Singh, Raid Kamel Naji: Dynamical behavior of two predators competing over a single prey. 808-817
- P. Banik, P. Pramanik, R. R. Sarkar, S. Bhattacharya, J. Chattopadhayay: A mathematical model on the effect of M. denticulata weed on different winter crops. 818-829
- Radina P. Soebiyanto, Sree N. Sreenath, Cheng-Kui Qu, Kenneth A. Loparo, Kevin D. Bunting: Complex systems biology approach to understanding coordination of JAK-STAT signaling. 830-842
- Sung Gun Lee, Jun Hyung Park, Bo Kyeng Hou, Young Han Kim, Cheol Min Kim, Kyu Suk Hwang: Effect of weight-added regulatory networks on constraint-based metabolic models of Escherichia coli. 843-855
- Jun Tanimoto: A study of indirect reciprocity involving a reputation system or a simple tag system in a one-shot, multi-player game. 856-869
- Darapond Triampo, Wannapong Triampo, I.-Ming Tang, Yongwimon Lenbury: The stochastic model of non-equilibrium mutagen-induced alterations of DNA: Implication to genetic instability in cancer. 870-880
- Chris J. Tinsley: Transforming bottom-up topographic representations with top-down signals in the brain. 881-889
- S.-H. Lee, N.-Y. Su, P. Bardunias: Exploring landscape structure effect on termite territory size using a model approach. 890-896
- Pei-ai Zhang, Pu-yan Nie, Dai-qiang Hu, Fei-yan Zou: The analysis of bi-level evolutionary graphs. 897-902
- Kazushi Murakoshi, Kyoji Suganuma: A neural circuit model forming semantic network with exception using spike-timing-dependent plasticity of inhibitory synapses. 903-910
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last updated on 2013-06-18T211851 by the dblp team