Concurrency and Computation: Practice and Experience, Volume 17

Volume 17, Number 1, January 2005

• Vincent Matossian, Viraj Bhat, Manish Parashar, Malgorzata Peszynska, Mrinal K. Sen, Paul L. Stoffa, Mary F. Wheeler:
  Autonomic oil reservoir optimization on the Grid. 1-26
  
• Joël M. Malard:
  A role for Pareto optimality in mining performance data. 27-48
  
• Pedro Alonso, José Manuel Badía-Contelles, Antonio M. Vidal:
  Solving the block-Toeplitz least-squares problem in parallel. 49-67
  
• Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart:
  Performance evaluation of the SX-6 vector architecture for scientific computations. 69-93
  

Volume 17, Number 2-4, February/April 2005

• John R. Gurd, Anthony J. G. Hey, Juri Papay, Graham D. Riley:
  Special Issue: Grid Performance. 95-98
  
• Michael Gerndt:
  Automatic performance analysis tools for the Grid. 99-115
  
• Allen D. Malony, Sameer Shende, Nick Trebon, Jaideep Ray, Robert C. Armstrong, Craig Edward Rasmussen, Matthew J. Sottile:
  Performance technology for parallel and distributed component software. 117-141
  
• Thomas Fahringer, Alexandru Jugravu, Sabri Pllana, Radu Prodan, Clovis Seragiotto Jr., Hong Linh Truong:
  ASKALON: a tool set for cluster and Grid computing. 143-169
  
• Erwin Laure, Heinz Stockinger, Kurt Stockinger:
  Performance engineering in data Grids. 171-191
  
• Shrideep Pallickara, Geoffrey Fox, Ahmet Uyar, Hongbin Liu, Xi Rao, David Walker, Beytullah Yildiz:
  Performance of a possible Grid message infrastructure. 193-214
  
• Graham R. Nudd, Stephen A. Jarvis:
  Performance-based middleware for Grid computing. 215-234
  
• Sathish S. Vadhiyar, Jack Dongarra:
  Self adaptivity in Grid computing. 235-257
  
• Christopher W. Armstrong, Rupert W. Ford, John R. Gurd, Mikel Luján, Kenneth R. Mayes, Graham D. Riley:
  Performance control of scientific coupled models in Grid environments. 259-295
  
• Anthony J. G. Hey, Juri Papay, Mike Surridge:
  The role of performance engineering techniques in the context of the Grid. 297-316
  
• Anthony J. G. Hey, Geoffrey Fox:
  Special Issue: Grids and Web Services for e-Science. 317-322
  
• Douglas Thain, Todd Tannenbaum, Miron Livny:
  Distributed computing in practice: the Condor experience. 323-356
  
• Mario Antonioletti, Malcolm P. Atkinson, Robert M. Baxter, Andrew Borley, Neil P. Chue Hong, Brian Collins, Neil Hardman, Alastair C. Hume, Alan Knox, Mike Jackson, Amrey Krause, Simon Laws, James Magowan, Norman W. Paton, Dave Pearson, Tom Sugden, Paul Watson, Martin Westhead:
  The design and implementation of Grid database services in OGSA-DAI. 357-376
  
• Malcolm P. Atkinson, David De Roure, Alistair N. Dunlop, Geoffrey Fox, Peter Henderson, Anthony J. G. Hey, Norman W. Paton, Steven Newhouse, Savas Parastatidis, Anne E. Trefethen, Paul Watson, Jim Webber:
  Web Service Grids: an evolutionary approach. 377-389
  
• Savas Parastatidis, Jim Webber, Paul Watson, Thomas Rischbeck:
  WS-GAF: a framework for building Grid applications using Web Services. 391-417
  

Volume 17, Number 5-6, April/May 2005

• Geoffrey Fox:
  Special Issue: ACM 2002 Java Grande-ISCOPE Conference. 419-422
  
• C. van Reeuwijk, Henk J. Sips:
  Adding tuples to Java: a study in lightweight data structures. 423-438
  
• Ronald Veldema, Ceriel J. H. Jacobs, Rutger F. H. Hofman, Henri E. Bal:
  Object combining: a new aggressive optimization for object intensive programs. 439-464
  
• Yue Yang, Ganesh Gopalakrishnan, Gary Lindstrom:
  UMM: an operational memory model specification framework with integrated model checking capability. 465-487
  
• Mikel Luján, John R. Gurd, T. L. Freeman, José Miguel-Alonso:
  Elimination of Java array bounds checks in the presence of indirection. 489-514
  
• Ondrej Lhoták, Laurie J. Hendren:
  Run-time evaluation of opportunities for object inlining in Java. 515-537
  
• Giuseppe Milicia, Vladimiro Sassone:
  Jeeg: temporal constraints for the synchronization of concurrent objects. 539-572
  
• Zoran Budimlic, Ken Kennedy:
  Compiling almost-whole Java programs. 573-587
  
• Brendon Cahoon, Kathryn S. McKinley:
  Recurrence analysis for effective array prefetching in Java. 589-616
  
• Michal Cierniak, Marsha Eng, Neal Glew, Brian T. Lewis, James M. Stichnoth:
  The Open Runtime Platform: a flexible high-performance managed runtime environment. 617-637
  
• Igor Pechtchanski, Vivek Sarkar:
  Immutability specification and its applications. 639-662
  
• Judith Bishop, R. Nigel Horspool, Basil Worrall:
  Experience in integrating Java with C# and .NET. 663-680
  
• Jagun Kwon, Andy J. Wellings, Steve King:
  Ravenscar-Java: a high-integrity profile for real-time Java. 681-713
  
• M. Teresa Higuera-Toledano, Valérie Issarny:
  Improving the memory management performance of RTSJ. 715-737
  

Volume 17, Number 7-8, June/July 2005

• Herbert Kuchen, Jörg Striegnitz:
  Features from functional programming for a C++ skeleton library. 739-756
  
• David Gregg, James F. Power, John Waldron:
  A method-level comparison of the Java Grande and SPEC JVM98 benchmark suites. 757-773
  
• Jameela Al-Jaroodi, Nader Mohamed, Hong Jiang, David R. Swanson:
  JOPI: a Java object-passing interface. 775-795
  
• Michael O. Neary, Peter R. Cappello:
  Advanced eager scheduling for Java-based adaptive parallel computing. 797-819
  
• Stefano Markidis, Giovanni Lapenta, W. B. VanderHeyden, Zoran Budimlic:
  Implementation and performance of a particle-in-cell code written in Java. 821-837
  
• Mikel Luján, T. L. Freeman, John R. Gurd:
  On the conditions necessary for removing abstraction penalties in OOLALA. 839-866
  
• Sang Boem Lim, Bryan Carpenter, Geoffrey Fox, Han-Ku Lee:
  Collective communication for the HPJava programming language. 867-894
  
• Jeremiah Willcock, Andrew Lumsdaine, Arch D. Robison:
  Using MPI with C# and the Common Language Infrastructure. 895-917
  
• Torey Alford, Vijay P. Shah, Anthony Skjellum, Nicolas H. Younan, Clayborne D. Taylor:
  inAspect: interfacing Java and VSIPL applications. 919-940
  
• Lie-Quan Lee, Andrew Lumsdaine:
  Generic programming for high-performance scientific applications. 941-965
  
• Pu-Chen Wei, Chung-Hsin Chen, Cheng-Wei Chen, Jenq Kuen Lee:
  Support and optimization of Java RMI over a Bluetooth environment. 967-989
  
• Han Hua, Dai Yafei, Li Xiaoming:
  CSFS: a Java enabled network file storage system. 991-1003
  
• Thomas Fahringer, Alexandru Jugravu:
  JavaSymphony: a new programming paradigm to control and synchronize locality, parallelism and load balancing for parallel and distributed computing. 1005-1025
  
• Avraham Leff, James T. Rayfield:
  Enterprise JavaBeans caching in clustered environments. 1027-1051
  
• Patrick Th. Eugster, Sébastien Baehni:
  Object-oriented programming in peer-to-peer systems. 1053-1078
  
• Rob van Nieuwpoort, Jason Maassen, Gosia Wrzesinska, Rutger F. H. Hofman, Ceriel J. H. Jacobs, Thilo Kielmann, Henri E. Bal:
  Ibis: a flexible and efficient Java-based Grid programming environment. 1079-1107
  
• Geoffrey Fox, Shrideep Pallickara, Xi Rao:
  Towards enabling peer-to-peer Grids. 1109-1131
  

Volume 17, Number 9, 10 August 2005

• Peter A. Buhr, Ashif S. Harji:
  Concurrent urban legends. 1133-1172
  
• Francisco Almeida, Daniel González, Luz Marina Moreno, Casiano Rodríguez:
  Pipelines on heterogeneous systems: models and tools. 1173-1195
  
• Ian J. Taylor, Ian Wang, Matthew S. Shields, Shalil Majithia:
  Distributed computing with Triana on the Grid. 1197-1214
  

Volume 17, Number 10, 25 August 2005

• David B. Nelson:
  Special Issue: Performance Issues in Computer Architecture and Design. 1215-1218
  
• Darren J. Kerbyson, Adolfy Hoisie, Harvey J. Wasserman:
  A performance comparison between the Earth Simulator and other terascale systems on a characteristic ASCI workload. 1219-1238
  
• Jeffrey S. Vetter, Bronis R. de Supinski, Lynn Kissel, John May, Sheila Vaidya:
  Evaluating high-performance computers. 1239-1270
  
• Ron Brightwell, William J. Camp, Benjamin Cole, Erik DeBenedictis, Robert W. Leland, James Tomkins, Arthur B. Maccabe:
  Architectural specification for massively parallel computers: an experience and measurement-based approach. 1271-1316
  
• Philip W. Jones, Patrick H. Worley, Yoshikatsu Yoshida, James B. White III, John Levesque:
  Practical performance portability in the Parallel Ocean Program (POP). 1317-1327
  
• Mike Ashworth, Ian J. Bush, Martyn F. Guest, Andrew G. Sunderland, Stephen Booth, Joachim Hein, Lorna Smith, Kevin Stratford, Alessandro Curioni:
  HPCx: towards capability computing. 1329-1361
  

Volume 17, Number 11, September 2005

• Malgorzata Peszynska, Mary F. Wheeler:
  Special Issue: High-Performance Computing in Geosciences. 1363-1364
  
• Indrajit G. Roy, Mrinal K. Sen, Carlos Torres-Verdin:
  Full waveform seismic inversion using a distributed system of computers. 1365-1385
  
• Manish Parashar, Rajeev Muralidhar, Wonsuck Lee, Dorian C. Arnold, Jack Dongarra, Mary F. Wheeler:
  Enabling interactive and collaborative oil reservoir simulations on the Grid. 1387-1414
  
• Stefan Lang, Gabriel Wittum:
  Large-scale density-driven flow simulations using parallel unstructured Grid adaptation and local multigrid methods. 1415-1440
  
• Tahsin M. Kurç, Ümit V. Çatalyürek, Xi Zhang, Joel H. Saltz, Ryan Martino, Mary F. Wheeler, Malgorzata Peszynska, Alan Sussman, Christian Hansen, Mrinal K. Sen, Roustam Seifoullaev, Paul L. Stoffa, Carlos Torres-Verdin, Manish Parashar:
  A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studies. 1441-1467
  

Volume 17, Number 12, October 2005

• Priya Narasimhan:
  Special Issue: Foundations of Middleware Technologies. 1469-1470
  
• Roberto Baldoni, Roberto Beraldi, Sara Tucci Piergiovanni, Antonino Virgillito:
  On the modelling of publish/subscribe communication systems. 1471-1495
  
• Rushikesh K. Joshi:
  Distributed filter processes. 1497-1506
  
• Piyush Maheshwari, Michael Pang:
  Benchmarking message-oriented middleware: TIB/RV versus SonicMQ. 1507-1526
  
• Priya Narasimhan, Tudor Dumitras, Aaron M. Paulos, Soila M. Pertet, Carlos F. Reverte, Joseph G. Slember, Deepti Srivastava:
  MEAD: support for Real-Time Fault-Tolerant CORBA. 1527-1545
  

Volume 17, Number 13, November 2005

• German Florez, Zhen Liu, Susan M. Bridges, Anthony Skjellum, Rayford B. Vaughn:
  Lightweight monitoring of MPI programs in real time. 1547-1578
  
• Ranieri Baraglia, Renato Ferrini, Pierluigi Ritrovato:
  A static mapping heuristics to map parallel applications to heterogeneous computing systems. 1579-1605
  
• Arun Krishnan:
  GridBLAST: a Globus-based high-throughput implementation of BLAST in a Grid computing framework. 1607-1623
  

Volume 17, Number 14, 10 December 2005

• Dan C. Marinescu:
  Special Issue: Third IEEE International Workshop on High Performance Computational Biology (HiCOMB 2004). 1625-1626
  

• Michela Taufer, Michael Crowley, Daniel J. Price, Andrew A. Chien, Charles L. Brooks III:
  Study of a highly accurate and fast protein-ligand docking method based on molecular dynamics. 1627-1641
  
• Shawna L. Thomas, Gabriel Tanase, Lucia K. Dale, Jose M. Moreira, Lawrence Rauchwerger, Nancy M. Amato:
  Parallel protein folding with STAPL. 1643-1656
  
• Rumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev:
  Dynamic programming for LR-PCR segmentation of bacterium genomes. 1657-1668
  
• Tong Liu, Bertil Schmidt:
  Parallel RNA secondary structure prediction using stochastic context-free grammars. 1669-1685
  
• Joël M. Malard, Alejandro Heredia-Langner, William R. Cannon, Ryan W. Mooney, Douglas J. Baxter:
  Peptide identification via constrained multi-objective optimization: Pareto-based genetic algorithms. 1687-1704
  
• Alexandros Stamatakis, Thomas Ludwig, Harald Meier:
  RAxML-II: a program for sequential, parallel and distributed inference of large phylogenetic trees. 1705-1723
  

Volume 17, Number 15, 25 December 2005

• Angela C. Sodan:
  Loosely coordinated coscheduling in the context of other approaches for dynamic job scheduling: a survey. 1725-1781
  
• Rajkumar Buyya, Susumu Date, Yuko Mizuno-Matsumoto, Srikumar Venugopal, David Abramson:
  Neuroscience instrumentation and distributed analysis of brain activity data: a case for eScience on global Grids. 1783-1798
  
• Paul Brebner, Emmanuel Cecchet, Julie Marguerite, Petr Tuma, Octavian Ciuhandu, Bruno Dufour, Lieven Eeckhout, Stéphane Frénot, Arvind S. Krishna, John Murphy, Clark Verbrugge:
  Middleware benchmarking: approaches, results, experiences. 1799-1805