Volume 3,
2003
Special Issue:
3rd International Conference on Bioinformatics of Genome Regulation and Structure (BGRS 2002)
- Nikolay A. Kolchanov, Ralf Hofestädt:
The 3rd International Conference on Bioinformatics of Genome Regulation and Structure (BGRS 2002) - Preface.
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- Alexei E. Kazakov, Olga Vassieva, Mikhail S. Gelfand, Andrei Osterman, Ross A. Overbeek:
Bioinformatics classification and functional analysis of PhoH homologs.
2
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- Vassily A. Lyubetsky, Vladimir V. V'yugin:
Methods of horizontal gene transfer determination using phylogenetic data.
3
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- Ludmila V. Danilova, Vassily A. Lyubetsky, Mikhail S. Gelfand:
An algorithm for identification of regulatory signals in unaligned DNA sequences, its testing and parallel implementation.
4
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- Elena D. Stavrovskaya, Andrey A. Mironov:
Two genetic algorithms for identification of regulatory signals.
5
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- Christopher R. Lockwood, Timothy M. Frayling:
Combining genome and mouse knockout expression data to highlight binding sites for the transcription factor HNF1alpha.
6
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- Ekaterina Shelest, Alexander E. Kel, Ellen Gößling, Edgar Wingender:
Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods.
7
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- Victor G. Levitsky, Alexey V. Katokhin:
Recognition of eukaryotic promoters using a genetic algorithm based on iterative discriminant analysis.
8
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- Alexander V. Spirov, David M. Holloway:
Making the body plan: Precision in the genetic hierarchy of Drosophila embryo segmentation.
9
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- Rustem N. Tchuraev, Alexander V. Galimzyanov:
Parametric stability evaluation in computer experiments on the mathematical model of Drosophila control gene subnetwork.
10
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- Olga G. Smirnova, Irina L. Stepanenko:
Application of filter technology in Photomorphogenesis Gene Network.
11
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- Mathias Vandenbogaert, Vsevolod Makeev:
Analysis of bacterial RM-Systems through genome-scale analysis and related taxonomic issues.
12
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- Olga V. Kel-Margoulis, Dmitri Tchekmenev, Alexander E. Kel, Ellen Gößling, Klaus Hornischer, Birgit Lewicki-Potapov, Edgar Wingender:
Composition-sensitive analysis of the human genome for regulatory signals.
13
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- Yuri F. Bogdanov, Sergei Y. Dadashev, Tatiana M. Grishaeva:
In silico search for functionally similar proteins involved in meiosis and recombination in evolutionarily distant organisms.
15
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- Sonja M. Schwarzl, Danzhi Huang, Jeremy C. Smith, Stefan Fischer:
How well does charge reparametrisation account for solvent screening in molecular mechanics calculations? The example of myosin.
16
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- Olga V. Kalinina, Vsevolod Makeev, Roman A. Sutormin, Mikhail S. Gelfand, Aleksandra B. Rakhmaninova:
The channel in transporters is formed by residues that are rare in transmembrane helices.
17
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- Lily Ph. Nizolenko, Alexander G. Bachinsky, Andrey N. Naumochkin, Andrey A. Yarigin, Dmitry A. Grigorovich:
Database of patterns PROF_PAT, used to detect local similarities.
18
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- Andreas Freier, Ralf Hofestädt, Matthias Lange:
IIUDB: An object-oriented system for modelling, integration and analysis of gene controlled metabolic networks.
19
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- Heike Pospisil, Alexander Herrmann, Harald Pankow, Jens G. Reich:
A database on alternative splice forms on the Integrated Genetic Map Service (IGMS).
20
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Further regular articles
- Daiya Takai, Peter A. Jones:
The CpG Island Searcher: A new WWW resource.
21
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- Boris Galitsky:
Revealing the set of mutually correlated positions for the protein families of immunoglobulin fold.
22
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- Hans-Peter Keck, Thomas Wetter:
Functional classification of proteins using a nearest neighbour algorithm.
23
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- Tannistha Nandi, Krishnamoorthy Kannan, Srinivasan Ramachandran:
The low complexity proteins from enteric pathogenic bacteria: Taxonomic parallels embedded in diversity.
24
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- Soumita Das, Keya Chaudhuri:
Identification of a unique IAHP (IcmF associated homologous proteins) cluster in Vibrio cholerae and other proteobacteria through in silico analysis.
25
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- Chad Creighton, Samir Hanash:
Expression of matrix metalloproteinase 9 (MMP-9/gelatinase B) in adenocarcinomas strongly correlated with expression of immune response genes.
26
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- Georg Fuellen, Michael Spitzer, Paul Cullen, Stefan Lorkowski:
BLASTing proteomes, yielding phylogenies.
27
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Special Issue:
Petri Nets for Metabolic Networks
Further regular articles
- Arnim Wiezer, Rainer Merkl:
secureBLAST.
33
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- Nikolai Petrovsky, Christian Schönbach, Vladimir Brusic:
Bioinformatic strategies for better understanding of immune function.
34
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- Oliviero Carugo:
Prediction of protein polypeptide fragments exposed to the solvent.
35
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- Chintalapati Janaki, Rajendra R. Joshi:
Accelerating comparative genomics using parallel computing.
36
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- Maike Tech, Rainer Merkl:
YACOP: Enhanced gene prediction obtained by a combination of existing methods.
37
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- Miroslava Cuperlovic-Culf, Gilles A. Robichaud, Michel Nardini, Rodney Ouellette:
Investigation of interaction between Pax5 isoforms and thioredoxin using de novo modelling methods.
38
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- Alexander N. Gorban, Andrei Yu. Zinovyev, Tatyana G. Popova:
Seven clusters in genomic triplet distributions.
39
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Copyright © Tue Nov 18 20:40:26 2008
by Michael Ley (ley@uni-trier.de)
