Volume 17, Number 1, January 2010
Edward H. Shortliffe, Nancy M. Lorenzi, Karen Greenwood, Alexis N. Broussard, Randolph A. Miller: JAMIA looks to the future amidst profound changes in the world of publishing. 1-2
Matthew Scotch, Mona Duggal, Cynthia Brandt, Zhenqui Lin, Richard N. Shiffman: Brief review: Use of statistical analysis in the biomedical informatics literature. 3-5
Gilad J. Kuperman, Jeffrey S. Blair, Richard A. Franck, Savithri Devaraj, Alexander F. H. Low: Application of information technology: Developing data content specifications for the Nationwide Health Information Network Trial Implementations. 6-12
Stephen M. Downs, Peter C. van Dyck, Piero Rinaldo, Clement McDonald, R. Rodrey Howell, Alan Zuckerman, Gregory J. Downing: Viewpoint paper: Improving newborn screening laboratory test ordering and result reporting using health information exchange. 13-18
Hua Xu, Shane P. Stenner, Son Doan, Kevin B. Johnson, Lemuel R. Waitman, Joshua C. Denny: Application of information technology: MedEx: a medication information extraction system for clinical narratives. 19-24
Annette Moxey, Jane Robertson, David Newby, Isla M. Hains, Margaret Williamson, Sallie-Anne Pearson: Review paper: Computerized clinical decision support for prescribing: provision does not guarantee uptake. 25-33
Deepthi Rajeev, Catherine J. Staes, R. Scott Evans, Susan Mottice, Robert Rolfs, Matthew H. Samore, Jon Whitney, Richard Kurzban, Stanley M. Huff: Application of information technology: Development of an electronic public health case report using HL7 v2.5 to meet public health needs. 34-41
Bala Hota, Michael Lin, Joshua A. Doherty, Tara Borlawsky, Keith Woeltje, Kurt Stevenson, Yosef Khan, Jeremy Young, Robert A. Weinstein, William E. Trick: Model formulation: Formulation of a model for automating infection surveillance: algorithmic detection of central-line associated bloodstream infection. 42-48
Jesse O. Wrenn, Daniel M. Stein, Suzanne Bakken, Peter D. Stetson: Research paper: Quantifying clinical narrative redundancy in an electronic health record. 49-53
Ronald M. Salomon, Jennifer Urbano Blackford, S. Trent Rosenbloom, Sandra Seidel, Ellen Wright Clayton, David M. Dilts, Stuart G. Finder: Research paper: Openness of patients' reporting with use of electronic records: psychiatric clinicians' views. 54-60
Julia Adler-Milstein, John Landefeld, Ashish K. Jha: Research paper: Characteristics associated with Regional Health Information Organization viability. 61-65
Adam Wright, Christine S. Soran, Chelsea A. Jenter, Lynn A. Volk, David W. Bates, Steven R. Simon: Research paper: Physician attitudes toward health information exchange: results of a statewide survey. 66-70
Sylvia J. Hysong, Mona K. Sawhney, Lindsay Wilson, Dean F. Sittig, Donna Espadas, Traber Davis, Hardeep Singh: Research paper: Provider management strategies of abnormal test result alerts: a cognitive task analysis. 71-77
Emily Beth Devine, Ryan N. Hansen, Jennifer L. Wilson-Norton, Nathan M. Lawless, Albert W. Fisk, David K. Blough, Diane P. Martin, Sean D. Sullivan: The impact of computerized provider order entry on medication errors in a multispecialty group practice. 78-84
Andrew M. Fine, Ben Y. Reis, Lise E. Nigrovic, Donald A. Goldmann, Tracy N. LaPorte, Karen L. Olson, Kenneth D. Mandl: Research paper: Use of population health data to refine diagnostic decision-making for pertussis. 85-90
Joshua E. Richardson, Joan S. Ash: Research paper: The effects of hands-free communication device systems: communication changes in hospital organizations. 91-98
Kevin C. Chang, J. Marc Overhage, Siu L. Hui, Martin C. Were: Case report: Enhancing laboratory report contents to improve outpatient management of test results. 99-103
Thomas R. Yackel, Peter J. Embi: Case report: Unintended errors with EHR-based result management: a case series. 104-107
Thomas H. Payne, Aharon E. tenBroek, Grant S. Fletcher, Mardi C. Labuguen: Case report: Transition from paper to electronic inpatient physician notes. 108-111
J. Stuart Hunter: Letters: Enhancing Friedman's "Fundamental Theorem of Biomedical Informatics". 112-113
Charles P. Friedman: Letters: The author's response. 112-113
Alexis N. Broussard: Reviewers for JAMIA volume 16. 114
Volume 17, Number 2, March 2010
Meryl Bloomrosen, Don E. Detmer: Informatics, evidence-based care, and research; implications for national policy: a report of an American Medical Informatics Association health policy conference. 115-123
Shawn N. Murphy, Griffin M. Weber, Michael Mendis, Vivian Gainer, Henry C. Chueh, Susanne Churchill, Isaac S. Kohane: Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2). 124-130
Christopher G. Chute, Scott A. Beck, Thomas B. Fisk, David N. Mohr: The Enterprise Data Trust at Mayo Clinic: a semantically integrated warehouse of biomedical data. 131-135
Jeffrey M. Ferranti, Matthew K. Langman, David Tanaka, Jonathan McCall, Asif Ahmad: Bridging the gap: leveraging business intelligence tools in support of patient safety and financial effectiveness. 136-143
Steven J. Steindel: OIDs: how can I express you? Let me count the ways. 144-147
Khaled El Emam, Emilio Neri, Elizabeth Jonker, Marina Sokolova, Liam Peyton, Angelica Neisa, Teresa Scassa: The inadvertent disclosure of personal health information through peer-to-peer file sharing programs. 148-158
Reyyan Yeniterzi, John S. Aberdeen, Samuel Bayer, Benjamin Wellner, Lynette Hirschman, Bradley Malin: Effects of personal identifier resynthesis on clinical text de-identification. 159-168
Kathleen Benitez, Bradley Malin: Evaluating re-identification risks with respect to the HIPAA privacy rule. 169-177
David S. Pieczkiewicz, Stanley M. Finkelstein: Evaluating the decision accuracy and speed of clinical data visualizations. 178-181
Prakash M. Nadkarni, Luis N. Marenco: Implementing description-logic rules for SNOMED-CT attributes through a table-driven approach. 182-184
Michael G. Kahn, Daksha Ranade: The impact of electronic medical records data sources on an adverse drug event quality measure. 185-191
Shane R. Reti, Henry J. Feldman, Stephen E. Ross, Charles Safran: Improving personal health records for patient-centered care. 192-195
Walter Palmas, Steven Shea, Justin Starren, Jeanne A. Teresi, Michael L. Ganz, Tanya M. Burton, Chris L. Pashos, Jan Blustein, Lesley Fields, Philip C. Morin, Roberto E. Izquierdo, Stephanie Silver, Joseph P. Eimicke, Rafael A. Lantigua, Ruth S. Weinstock: Medicare payments, healthcare service use, and telemedicine implementation costs in a randomized trial comparing telemedicine case management with usual care in medically underserved participants with diabetes mellitus (IDEATel). 196-202
Kim M. Nazi: Veterans' voices: use of the American Customer Satisfaction Index (ACSI) Survey to identify My HealtheVet personal health record users' characteristics, needs, and preferences. 203-211
Rebecca L. Kesman, Ahmed S. Rahman, Eleanor Y. Lin, Eric A. Barnitt, Rajeev Chaudhry: Population informatics-based system to improve osteoporosis screening in women in a primary care practice. 212-216
Joseph Lurio, Frances P. Morrison, Michelle Pichardo, Rachel Berg, Michael D. Buck, Winfred Wu, Kwame Kitson, Farzad Mostashari, Neil S. Calman: Using electronic health record alerts to provide public health situational awareness to clinicians. 217-219
Gondy Leroy, Trudi Miller: Perils of providing visual health information overviews for consumers with low health literacy or high stress. 220-223
James S. Kahn, Joan F. Hilton, T. Van Nunnery, Skip Leasure, Kelly M. Bryant, C. Bradley Hare, David H. Thom: Personal health records in a public hospital: experience at the HIV/AIDS clinic at San Francisco General Hospital. 224-228
Volume 17, Number 3, May 2010
Alan R. Aronson, François-Michel Lang: An overview of MetaMap: historical perspective and recent advances. 229-236
Martin C. Were, Nneka Emenyonu, Marion Achieng, Changyu Shen, John Ssali, John P. M. Masaba, William M. Tierney: Evaluating a scalable model for implementing electronic health records in resource-limited settings. 237-244
Jung-Hsien Chiang, Jou-Wei Lin, Chen-Wei Yang: Automated evaluation of electronic discharge notes to assess quality of care for cardiovascular diseases using Medical Language Extraction and Encoding System (MedLEE). 245-252
Rebecca S. Crowley, Melissa Castine, Kevin Mitchell, Girish Chavan, Tara McSherry, Michael Feldman: caTIES: a grid based system for coding and retrieval of surgical pathology reports and tissue specimens in support of translational research. 253-264
Kim M. Unertl, Laurie L. Novak, Kevin B. Johnson, Nancy M. Lorenzi: Traversing the many paths of workflow research: developing a conceptual framework of workflow terminology through a systematic literature review. 265-273
Steven J. Steindel: International classification of diseases, 10th edition, clinical modification and procedure coding system: descriptive overview of the next generation HIPAA code sets. 274-282
F. Jeff Friedlin, Clement J. McDonald: An evaluation of medical knowledge contained in Wikipedia and its use in the LOINC database. 283-287
Joshua R. Vest, Larry D. Gamm: Health information exchange: persistent challenges and new strategies. 288-294
Brian E. Dixon, Atif Zafar, J. Marc Overhage: A Framework for evaluating the costs, effort, and value of nationwide health information exchange. 295-301
Joshua R. Vest, Jon Jasperson: What should we measure? Conceptualizing usage in health information exchange. 302-307
Gregory W. Roberts, Christopher J. Farmer, Philip C. Cheney, Stephen M. Govis, Thomas W. Belcher, Scott A. Walsh, Robert J. Adams: Clinical decision support implemented with academic detailing improves prescribing of key renally cleared drugs in the hospital setting. 308-312
Karen Dunn Lopez, Gregory J. Gerling, Michael P. Cary, Mary F. Kanak: Cognitive work analysis to evaluate the problem of patient falls in an inpatient setting. 313-321
Grigorios Loukides, Joshua C. Denny, Bradley Malin: The disclosure of diagnosis codes can breach research participants' privacy. 322-327
Kai Zheng, Rema Padman, David Krackhardt, Michael P. Johnson, Herbert S. Diamond: Social networks and physician adoption of electronic health records: insights from an empirical study. 328-336
Genevieve B. Melton, Nandhini Raman, Elizabeth S. Chen, Indra Neil Sarkar, Serguei V. S. Pakhomov, Robert D. Madoff: Evaluation of family history information within clinical documents and adequacy of HL7 clinical statement and clinical genomics family history models for its representation: a case report. 337-340
Bridget A. Stewart, Susan Fernandes, Elizabeth Rodriguez-Huertas, Michael Landzberg: A preliminary look at duplicate testing associated with lack of electronic health record interoperability for transferred patients. 341-344
Hanjun Shin, Ki Hoon Kim, Chihwan Song, Injoon Lee, Kyubum Lee, Jaewoo Kang, Yoon Kyoo Kang: Electrodiagnosis support system for localizing neural injury in an upper limb. 345-347
Nathanael Lapidus, Fabrice Carrat: WTW - an algorithm for identifying "who transmits to whom" in outbreaks of interhuman transmitted infectious agents. 348-353
Daniel R. Masys: American College of Medical Informatics Fellows, 2009. 354-357
Volume 17, Number 4, July 2010
Daniel J. Friedman, R. Gibson Parrish II: The population health record: concepts, definition, design, and implementation. 359-366
Don Eugene Detmer: Activating a full architectural model: improving health through robust population health records. 367-369
Donald W. Simborg: Consumer empowerment versus consumer populism in healthcare IT. 370-372
Andreas Leithner, Werner Maurer-Ertl, Mathias Glehr, Joerg Friesenbichler, Katharina Leithner, Reinhard Windhager: Wikipedia and osteosarcoma: a trustworthy patients' information? 373-374
Leonard W. D'Avolio, Thien M. Nguyen, Wildon R. Farwell, Yongming Chen, Felicia Fitzmeyer, Owen M. Harris, Louis D. Fiore: Evaluation of a generalizable approach to clinical information retrieval using the automated retrieval console (ARC). 375-382
Joshua C. Denny, Josh F. Peterson, Neesha N. Choma, Hua Xu, Randolph A. Miller, Lisa Bastarache, Neeraja B. Peterson: Extracting timing and status descriptors for colonoscopy testing from electronic medical records. 383-388
Helaine E. Resnick, Majd Alwan: Use of health information technology in home health and hospice agencies: United States, 2007. 389-395
Esther S. Park, Marie R. Peccoud, Kay A. Wicks, Jeffrey B. Halldorson, Robert L. Carithers Jr., Jorge D. Reyes, James D. Perkins: Use of an automated clinical management system improves outpatient immunosuppressive care following liver transplantation. 396-402
Cornelia M. Ruland, Harald H. Holte, Jo Røislien, Cathy Heaven, Glenys A. Hamilton, Jørn Kristiansen, Heidi Sandbæk, Stein O. Kvaløy, Line Hasund, Misoo C. Ellison: Effects of a computer-supported interactive tailored patient assessment tool on patient care, symptom distress, and patients' need for symptom management support: a randomized clinical trial. 403-410
Brian L. Strom, Rita Schinnar, Warren B. Bilker, Sean Hennessy, Charles E. Leonard, Eric A. Pifer: Randomized clinical trial of a customized electronic alert requiring an affirmative response compared to a control group receiving a commercial passive CPOE alert: NSAID-warfarin co-prescribing as a test case. 411-415
David T. Bauer, Stephanie A. Guerlain, Patrick J. Brown: The design and evaluation of a graphical display for laboratory data. 416-424
Ritu Agarwal, Corey M. Angst, Catherine M. DesRoches, Michael A. Fischer: Technological viewpoints (frames) about electronic prescribing in physician practices. 425-431
Jyotishman Pathak, Christopher G. Chute: Analyzing categorical information in two publicly available drug terminologies: RxNorm and NDF-RT. 432-439
Anthony N. Nguyen, Michael Lawley, David P. Hansen, Rayleen V. Bowman, Belinda E. Clarke, Edwina E. Duhig, Shoni Colquist: Symbolic rule-based classification of lung cancer stages from free-text pathology reports. 440-445
Stan Matwin, Alexandre Kouznetsov, Diana Inkpen, Oana Frunza, Peter O'Blenis: A new algorithm for reducing the workload of experts in performing systematic reviews. 446-453
Kai Zheng, Hilary M. Haftel, Ronald B. Hirschl, Michael O'Reilly, David A. Hanauer: Quantifying the impact of health IT implementations on clinical workflow: a new methodological perspective. 454-461
Xia Jiang, Gregory F. Cooper: A Bayesian spatio-temporal method for disease outbreak detection. 462-471
Matvey B. Palchuk, Elizabeth A. Fang, Janet M. Cygielnik, Matthew Labreche, Maria Shubina, Harley Z. Ramelson, Claus Hamann, Carol A. Broverman, Jonathan S. Einbinder, Alexander Turchin: An unintended consequence of electronic prescriptions: prevalence and impact of internal discrepancies. 472-476
Walter H. Curioso, Sherrilynne S. Fuller, Patricia J. Garcia, King K. Holmes, Ann Marie Kimball: Ten years of international collaboration in biomedical informatics and beyond: the AMAUTA program in Peru. 477-480
Donald Ellison, Betsy L. Humphreys, Joyce A. Mitchell: Presentation of the 2009 Morris F Collen Award to Betsy L Humphreys, with remarks from the recipient. 481-485
Volume 17, Number 5, September 2010
Jason A. Lyman, Wendy F. Cohn, Meryl Bloomrosen, Don E. Detmer: Clinical decision support: progress and opportunities. 487-492
Shobha Phansalkar, Judy Edworthy, Elizabeth Hellier, Diane L. Seger, Angela Schedlbauer, Anthony J. Avery, David W. Bates: A review of human factors principles for the design and implementation of medication safety alerts in clinical information systems. 493-501
Jonathan S. Wald, Alexandra Businger, Tejal K. Gandhi, Richard W. Grant, Eric G. Poon, Jeffrey L. Schnipper, Lynn A. Volk, Blackford Middleton: Implementing practice-linked pre-visit electronic journals in primary care: patient and physician use and satisfaction. 502-506
Guergana K. Savova, James J. Masanz, Philip V. Ogren, Jiaping Zheng, Sunghwan Sohn, Karin Kipper Schuler, Christopher G. Chute: Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. 507-513
Özlem Uzuner, Imre Solti, Eithon Cadag: Extracting medication information from clinical text. 514-518
Özlem Uzuner, Imre Solti, Fei Xia, Eithon Cadag: Community annotation experiment for ground truth generation for the i2b2 medication challenge. 519-523
Jon Patrick, Min Li: High accuracy information extraction of medication information from clinical notes: 2009 i2b2 medication extraction challenge. 524-527
Son Doan, Lisa Bastarache, Sergio Klimkowski, Joshua C. Denny, Hua Xu: Integrating existing natural language processing tools for medication extraction from discharge summaries. 528-531
Irena Spasic, Farzaneh Sarafraz, John A. Keane, Goran Nenadic: Medication information extraction with linguistic pattern matching and semantic rules. 532-535
James G. Mork, Olivier Bodenreider, Dina Demner-Fushman, Rezarta Islamaj Dogan, François-Michel Lang, Zhiyong Lu, Aurélie Névéol, Lee B. Peters, Sonya E. Shooshan, Alan R. Aronson: Extracting Rx information from clinical narrative. 536-539
Domonkos Tikk, Illés Solt: Improving textual medication extraction using combined conditional random fields and rule-based systems. 540-544
Hui Yang: Automatic extraction of medication information from medical discharge summaries. 545-548
Thierry Hamon, Natalia Grabar: Linguistic approach for identification of medication names and related information in clinical narratives. 549-554
Louise Deléger, Cyril Grouin, Pierre Zweigenbaum: Extracting medical information from narrative patient records: the case of medication-related information. 555-558
Stéphane M. Meystre, Julien Thibault, Shuying Shen, John F. Hurdle, Brett R. South: Textractor: a hybrid system for medications and reason for their prescription extraction from clinical text documents. 559-562
Zuofeng Li, Feifan Liu, Lamont D. Antieau, Yonggang Cao, Hong Yu: Lancet: a high precision medication event extraction system for clinical text. 563-567
Iftikhar J. Kullo, Jin Fan, Jyotishman Pathak, Guergana K. Savova, Zeenat Ali, Christopher G. Chute: Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease. 568-574
Farah Magrabi, Simon Y. W. Li, Richard O. Day, Enrico W. Coiera: Errors and electronic prescribing: a controlled laboratory study to examine task complexity and interruption effects. 575-583
Douglas S. Wakefield, Marcia M. Ward, Jean L. Loes, John O'Brien: A network collaboration implementing technology to improve medication dispensing and administration in critical access hospitals. 584-587
Herbert S. Chase, Jai Radhakrishnan, Shayan Shirazian, Maya K. Rao, David K. Vawdrey: Under-documentation of chronic kidney disease in the electronic health record in outpatients. 588-594
Wendy Webber Chapman, John N. Dowling, Atar Baer, David L. Buckeridge, Dennis Cochrane, Michael A. Conway, Peter Elkin, Jeremy U. Espino, Julia E. Gunn, Craig M. Hales, Lori Hutwagner, Mikaela Keller, Catherine Larson, Rebecca Noe, Anya Okhmatovskaia, Karen Olson, Marc Paladini, Matthew Scholer, Carol Sniegoski, David Thompson, Bill Lober: Developing syndrome definitions based on consensus and current use. 595-601
Prakash M. Nadkarni, Jonathan A. Darer: Migrating existing clinical content from ICD-9 to SNOMED. 602-607
David L. Green, Jan A. Boonstra, Marlene A. Bober: Use of a codified medication process for documentation of home medications. 608-612
Jeffrey R. Wilcke, Julie M. Green, Kent A. Spackman, Michael K. Martin, James T. Case, Suzanne L. Santamaria, Kurt Zimmerman: Letter: Concerning SNOMED-CT content for public health case reports. 613
Deepthi Rajeev, Catherine J. Staes, R. Scott Evans, Susan Mottice, Robert Rolfs, Matthew H. Samore, Jon Whitney, Richard Kurzban, Stanley M. Huff: Letter: In response to letter to the editor: 'Concerning SNOMED-CT content for public health case reports'. 613-614
Subramani Mani: Letter: Note on Friedman's 'fundamental theorem of biomedical informatics'. 614
Volume 17, Number 6, November 2010
Philip R. O. Payne, Peter J. Embi, Joyce C. Niland: Foundational biomedical informatics research in the clinical and translational science era: a call to action. 615-616
Ben-Tzion Karsh, Matthew B. Weinger, Patricia A. Abbott, Robert L. Wears: Health information technology: fallacies and sober realities. 617-623
Randolph A. Miller: All's well that ends well for JAMIA editors. 624-625
Gad Levy, Nehemia Blumberg, Yitshak Kreiss, Nachman Ash, Ofer Merin: Application of information technology within a field hospital deployment following the January 2010 Haiti earthquake disaster. 626-630
Shira H. Fischer, Jennifer Tjia, Terry S. Field: Impact of health information technology interventions to improve medication laboratory monitoring for ambulatory patients: a systematic review. 631-636
Francis Y. Lau, Craig E. Kuziemsky, Morgan Price, Jesse Gardner: A review on systematic reviews of health information system studies. 637-645
Mary H. Stanfill, Margaret Williams, Susan H. Fenton, Robert A. Jenders, William R. Hersh: A systematic literature review of automated clinical coding and classification systems. 646-651
Stephanie J. Reisinger, Patrick B. Ryan, Donald J. O'Hara, Gregory E. Powell, Jeffery L. Painter, Edward N. Pattishall, Jonathan A. Morris: Development and evaluation of a common data model enabling active drug safety surveillance using disparate healthcare databases. 652-662
Farah Magrabi, Mei-Sing Ong, William Runciman, Enrico W. Coiera: An analysis of computer-related patient safety incidents to inform the development of a classification. 663-670
Prakash M. Nadkarni: Drug safety surveillance using de-identified EMR and claims data: issues and challenges. 671-674
Kin Wah Fung, Clement McDonald, Suresh Srinivasan: The UMLS-CORE project: a study of the problem list terminologies used in large healthcare institutions. 675-680
Shane P. Stenner, Qingxia Chen, Kevin B. Johnson: Impact of generic substitution decision support on electronic prescribing behavior. 681-688
Stephen B. Johnson, Glen Whitney, Matthew J. McAuliffe, Hailong Wang, Evan S. McCreedy, Leon Rozenblit, Clark C. Evans: Using global unique identifiers to link autism collections. 689-695
Shashank Agarwal, Hong Yu: Biomedical negation scope detection with conditional random fields. 696-701
Mayank K. Mittal, Sonal Dhuper, Chokkalingam Siva, John L. Fresen, Marius Petruc, Celso R. Velázquez: Assessment of email communication skills of rheumatology fellows: a pilot study. 702-706
Kuang-Yi Wen, David H. Gustafson, Robert P. Hawkins, Patricia Flatley Brennan, Susan Dinauer, Pauley R. Johnson, Tracy Siegler: Developing and validating a model to predict the success of an IHCS implementation: the Readiness for Implementation Model. 707-713
Jyotishman Pathak, Lee B. Peters, Christopher G. Chute, Olivier Bodenreider: Comparing and evaluating terminology services application programming interfaces: RxNav, UMLSKS and LexBIG. 714-719
Yvonne Koh, Chun Wei Yap, Shu Chuen Li: Development of a combined system for identification and classification of adverse drug reactions: Alerts Based on ADR Causality and Severity (ABACUS). 720-722



