Volume 2, Number 1, Spring 1995
Volume 2, Number 2, Summer 1995
Special Issue:
Combinatorial Methods for DNA Mapping and Sequencing.
- Farid Alizadeh, Richard M. Karp, Deborah K. Weisser, Geoffrey Zweig:
Physical Mapping of Chromosomes Using Unique Probes.
159-184
- Will D. Gillett, Jim Daues, Liz Hanks, Robert G. Capra:
Fragment Collapsing and Splitting While Assembling High-Resolution Restriction Maps.
185-205
- Martin E. Dyer, Alan M. Frieze, Stephen Suen:
Ordering Clone Libraries in Computational Biology.
207-218
- David S. Greenberg, Sorin Istrail:
Physical Mapping by STS Hybridization: Algorithmic Strategies and the Challenge of Software Evaluation.
219-273
- Eugene W. Myers:
Toward Simplifying and Accurately Formulating Fragment Assembly.
275-290
- Ramana M. Idury, Michael S. Waterman:
A New Algorithm for DNA Sequence Assembly.
291-306
- Chris Armen, Clifford Stein:
Short Superstrings and the Structure of Overlapping Strings.
307-332
- Steven Skiena, Gopalakrishnan Sundaram:
Reconstructing Strings from Substrings.
333-353
- Aleksandar Milosavljevic:
DNA Sequence Recognition by Hybridization to Short Oligomers.
355-370
- Anatoly R. Rubinov, Mikhail S. Gelfand:
Reconstruction of a String from Substring Precedence Data.
371-381
- Oleg Razgulyaev, Anatoly R. Rubinov, Mikhail S. Gelfand, Alexander Chetverin:
Sequencing Potential of Nested Strand Hybridization.
383-395
Volume 2, Number 3, Fall 1995
- Richa Agarwala, David Fernández-Baca, Giora Slutzki:
Fast Algorithms for Inferring Evolutionary Trees.
397-407
- Jian Sun, Wen-Yuan Song, Li-Huang Zhu, Runsheng Chen:
Analysis of tRNA Gene Sequences by Neural Network.
409-416
- Sophie Schbath, Bernard Prum, Elisabeth de Turckheim:
Exceptional Motifs in Different Markov Chain Models for a Statistical Analysis of DNA Sequences.
417-437
- Michael A. Charleston:
Toward a Characterization of Landscapes of Combinatorial Optimization Problems, with Special Attention to the Phylogeny Problem.
439-450
- K. C. Worley, K. Y. King, S. Chua, E. R. B. McCabe, R. F. Smith:
Identification of New Members of a Carbohydrate Kinase-Encoding Gene Family.
451-458
- Sandeep K. Gupta, John D. Kececioglu, Alejandro A. Schäffer:
Improving the Practical Space and Time Efficiency of the Shortest-Paths Approach to Sum-of-Pairs Multiple Sequence Alignment.
459-472
- Steven Salzberg:
Locating Protein Coding Regions in Human DNA Using a Decision Tree Algorithm.
473-485
- Pierre Baldi:
Substitution Matrices and Hidden Markov Models.
487-491
Volume 2, Number 4, Winter 1995
- Boris Mirkin, Ilya B. Muchnik, Temple F. Smith:
A Biologically Consistent Model for Comparing Molecular Phylogenies.
493-507
- Harold T. Wareham:
A Simplified Proof of the NP- and MAX SNP-Hardness of Multiple Sequence Tree Alignment.
509-514
- Craig J. Benham, Sampath Kannan, Michael Paterson, Tandy Warnow:
Hen's Teeth and Whale's Feet: Generalized Characters and Their Compatibility.
515-525
- Boris A. Reva, Dmitrii S. Rykunov, Arthur J. Olson, Alexei V. Finkelstein:
Constructing Lattice Models of Protein Chains with Side Groups.
527-535
- Victor M. Markowitz:
Heterogeneous Molecular Biology Databases.
537-538
- Stanley Letovsky:
Beyond the Information Maze.
539-546
- Victor M. Markowitz, Otto Ritter:
Characterizing Heterogeneous Molecular Biology Database Systems.
547-556
- Susan B. Davidson, G. Christian Overton, Peter Buneman:
Challenges in Integrating Biological Data Sources.
557-572
- Peter D. Karp:
A Strategy for Database Interoperation.
573-586
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