Journal of Computer Science and Technology, Volume 25

Volume 25, Number 1, January 2009

• Ying Xu, Ming Li, Tao Jiang:
  Preface. 1-2
  
• David C. Schwartz, Michael S. Waterman:
  New Generations: Sequencing Machines and Their Computational Challenges. 3-9
  
• David Sankoff, Chunfang Zheng, Adriana Muñoz, Zhenyu Yang, Zaky Adam, Robert Warren, Vicky Choi, Qian Zhu:
  Issues in the Reconstruction of Gene Order Evolution. 10-25
  
• Michael Q. Zhang, Andrew D. Smith:
  Challenges in Understanding Genome-Wide DNA Methylation. 26-34
  
• Shoudan Liang:
  Genome-Wide Analysis of Epigenetic Modifications. 35-41
  
• Tao Jiang:
  Some Algorithmic Challenges in Genome-Wide Ortholog Assignment. 42-52
  
• Ying Xu:
  Computational Challenges in Deciphering Genomic Structures of Bacteria. 53-70
  
• John C. Wooley, Yuzhen Ye:
  Metagenomics: Facts and Artifacts, and Computational Challenges. 71-81
  
• Gloria Rendon, Mao-Feng Ger, Ruth Kantorovitz, Shreedhar Natarajan, Jeffrey L. Tilson, Eric Jakobsson:
  Understanding the "Horizontal Dimension" of Molecular Evolution to Annotate, Classify, and Discover Proteins with Functional Domains. 82-94
  
• Ming Li:
  Can We Determine a Protein Structure Quickly? 95-106
  
• Bin Ma:
  Challenges in Computational Analysis of Mass Spectrometry Data for Proteomics. 107-123
  
• Limsoon Wong, Guimei Liu:
  Protein Interactome Analysis for Countering Pathogen Drug Resistance. 124-130
  
• Rui Yamaguchi, Seiya Imoto, Satoru Miyano:
  Network-Based Predictions and Simulations by Biological State Space Models: Search for Drug Mode of Action. 131-153
  
• Jie Liang, Hong Qian:
  Computational Cellular Dynamics Based on the Chemical Master Equation: A Challenge for Understanding Complexity. 154-168
  
• Hong-Jie Dai, Yen-Ching Chang, Richard Tzong-Han Tsai, Wen-Lian Hsu:
  New Challenges for Biological Text-Mining in the Next Decade. 169-179
  

Volume 25, Number 2, March 2010

• Xiang Gao, Yunji Chen, Huandong Wang, Dan Tang, Weiwu Hu:
  System Architecture of Godson-3 Multi-Core Processors. 181-191
  
• Bao-Xia Fan, Liang Yang, Jiang-Mei Wang, Ru Wang, Bin Xiao, Ying Xu, Dong Liu, Ji-Ye Zhao:
  Physical Implementation of the 1GHz Godson-3 Quad-Core Microprocessor. 192-199
  
• Xu Cheng, Xiaoyin Wang, Junlin Lu, Jiangfang Yi, Dong Tong, Xuetao Guan, Feng Liu, Xianhua Liu, Chun Yang, Yi Feng:
  Research Progress of UniCore CPUs and PKUnity SoCs. 200-213
  
• Shuming Chen, Jianghua Wan, Jianzhuang Lu, Zhong Liu, Hai-Yan Sun, Yong-Jie Sun, Heng-Zhu Liu, Xiang-Yuan Liu, Zhentao Li, Yi Xu, Xiaowen Chen:
  YHFT-QDSP: High-Performance Heterogeneous Multi-Core DSP. 214-224
  
• Ji-Ye Zhao, Dong Liu, Dan-Dan Huan, Meng-Hao Su, Bin Xiao, Ying Xu, Feng Shi, Chen Chen, Song Wang:
  Physical Design Methodology for Godson-2G Microprocessor. 225-231
  
• Xue-Jun Yang, Jun-Jie Wu, Kun Zeng, Yuhua Tang:
  Managing Data-Objects in Dynamically Reconfigurable Caches. 232-245
  
• Song-Liu Guo, Hai-Xia Wang, Yi-Bo Xue, Chong-Min Li, Dong-Sheng Wang:
  Hierarchical Cache Directory for CMP. 246-256
  
• Jing-Lei Wang, Yi-Bo Xue, Hai-Xia Wang, Chong-Min Li, Dong-Sheng Wang:
  CCNoC: Cache-Coherent Network on Chip for Chip Multiprocessors. 257-266
  
• Xiang-Dong Hu, Yong Guo, Ying Zhu, Xin Guo, Peng Wang:
  Design and Application of Instruction Set Simulator on Multi-Core Verification. 267-273
  
• Yunhao Liu, Zheng Yang, Xiaoping Wang, Lirong Jian:
  Location, Localization, and Localizability. 274-297
  
• Moonseong Kim, Matt W. Mutka, Jeonghoon Park, Hyunseung Choo:
  ROAD+: Route Optimization with Additional Destination-Information and Its Mobility Management in Mobile Networks. 298-312
  
• InSung Kang, SungJin Choi, Soon Young Jung, SangKeun Lee:
  Tree-Based Index Overlay in Hybrid Peer-to-Peer Systems. 313-329
  
• KwangJin Park, Hyunseung Choo:
  Location-Based Data Dissemination for Spatial Queries in Wireless Broadcast Environments. 330-346
  
• Guo-liang Li, Jian-Hua Feng:
  An Effective Semantic Cache for Exploiting XPath Query/View Answerability. 347-361
  
• Yongdong Wu, Robert H. Deng:
  A Multi-Key Pirate Decoder Against Traitor Tracing Schemes. 362-374
  
• Zhen Cao, Zhi Guan, Zhong Chen, Jian-bin Hu, Liyong Tang:
  Towards Risk Evaluation of Denial-of-Service Vulnerabilities in Security Protocols. 375-387
  

Volume 25, Number 3, May 2010

• Xiao-Feng Meng, Hai-Xun Wang:
  Preface. 387-388
  
• Bin Wang, Xiaochun Yang, Guoren Wang, Ge Yu:
  Outlier Detection over Sliding Windows for Probabilistic Data Streams. 389-400
  
• Wendy Hui Wang:
  Privacy-Preserving Data Sharing in Cloud Computing. 401-414
  
• Yu-Ling Hsueh, Roger Zimmermann, Wei-Shinn Ku:
  Efficient Location Updates for Continuous Queries over Moving Objects. 415-430
  
• Jin Huang, Feng Zhao, Jian Chen, Jian Pei, Jian Yin:
  Towards Progressive and Load Balancing Distributed Computation: A Case Study on Skyline Analysis. 431-443
  
• Lijun Chang, Jeffrey Xu Yu, Lu Qin:
  Context-Sensitive Document Ranking. 444-457
  
• Charu C. Aggarwal, Chen Chen, Jiawei Han:
  The Inverse Classification Problem. 458-468
  
• Ai-Hua Wu, Zijing Tan, Wei Wang:
  Annotation Based Query Answer over Inconsistent Database. 469-481
  
• Zujie Ren, Ke Chen, Lidan Shou, Gang Chen, Yijun Bei, Xiaoyan Li:
  HAPS: Supporting Effective and Efficient Full-Text P2P Search with Peer Dynamics. 482-498
  
• Xin Wang, Linpeng Huang, Yi Zhang, Xiaohui Xu, Jun-Qing Chen:
  A Solution of Data Inconsistencies in Data Integration - Designed for Pervasive Computing Environment. 499-508
  
• Sai Tung On, Haibo Hu, Yu Li, Jianliang Xu:
  Flash-Optimized B+-Tree. 509-522
  
• Ying-Yuan Xiao, Yue-Guo Chen:
  Efficient Distributed Skyline Queries for Mobile Applications. 523-536
  
• Yong-Quan Dong, Qing-Zhong Li, Yan-Hui Ding, Zhao-Hui Peng:
  A Query Interface Matching Approach Based on Extended Evidence Theory for Deep Web. 537-547
  
• Hong Zhu, Ge Fu, Yucai Feng, Kevin Lü:
  Dynamic Damage Recovery for Web Databases. 548-561
  
• Chao-Hui Shen, Guo-Xin Zhang, Yu-Kun Lai, Shi-Min Hu, Ralph R. Martin:
  Harmonic Field Based Volume Model Construction from Triangle Soup. 562-571
  
• Lin Cong, Ruofeng Tong, Jinxiang Dong:
  Making Slide Shows with Zoomquilts. 572-582
  
• Huai-Yu Wu, Chunhong Pan, Hongbin Zha, Songde Ma:
  Model Transduction for Triangle Meshes. 583-594
  
• Jin Wei, Yu Lou:
  Feature Preserving Mesh Simplification Using Feature Sensitive Metric. 595-605
  
• Ling-Qiang Ran, Xiang-Xu Meng:
  Geometry Texture Synthesis Based on Laplacian Texture Image. 606-613
  
• Oded Zaideman, Anath Fischer:
  Geometric Bone Modeling: From Macro to Micro Structures. 614-622
  
• J. Dinesh Peter, V. K. Govindan, Abraham T. Mathew:
  Nonlocal-Means Image Denoising Technique Using Robust M-Estimator. 623-631
  
• Thanh Binh Nguyen, Ashish Khare:
  Multilevel Threshold Based Image Denoising in Curvelet Domain. 632-640
  
• Yong-Zhao Zhan, Ke-Yang Cheng, Ya-Bi Chen, Chuan-Jun Wen:
  A New Classifier for Facial Expression Recognition: Fuzzy Buried Markov Model. 641-650
  

Volume 25, Number 4, July 2010

• Zhi-Hua Zhou, Hang Li:
  Preface. 651-652
  
• Dilan Görür, Carl Edward Rasmussen:
  Dirichlet Process Gaussian Mixture Models: Choice of the Base Distribution. 653-664
  
• Nikita A. Sakhanenko, George F. Luger:
  Model Failure and Context Switching Using Logic-Based Stochastic Models. 665-680
  
• Mohamed Farouk Abdel Hady, Friedhelm Schwenker:
  Combining Committee-Based Semi-Supervised Learning and Active Learning. 681-698
  
• Bin Gu, Jiandong Wang, Tao Li:
  Ordinal-Class Core Vector Machine. 699-708
  
• Lei Jia, Shizhong Liao, Li-Zhong Ding:
  Learning with Uncertain Kernel Matrix Set. 709-727
  
• Ruihua Song, Zhicheng Dou, Hsiao-Wuen Hon, Yong Yu:
  Learning Query Ambiguity Models by Using Search Logs. 728-738
  
• Chong Long, Minlie Huang, Xiaoyan Zhu, Ming Li:
  A New Approach for Multi-Document Update Summarization. 739-749
  
• Fei Wu, Yahong Han, Yueting Zhuang:
  Multiple Hypergraph Clustering of Web Images by MiningWord2Image Correlations. 750-760
  
• Yan-Hui Ding, Qing-Zhong Li, Yong-Quan Dong, Zhao-Hui Peng:
  2D Correlative-Chain Conditional Random Fields for Semantic Annotation of Web Objects. 761-770
  
• R. Raghavendra, Ashok Rao, G. Hemantha Kumar:
  Multimodal Biometric Score Fusion Using Gaussian Mixture Model and Monte Carlo Method. 771-782
  
• Qiang Wu, Liqing Zhang, Guangchuan Shi:
  Robust Feature Extraction for Speaker Recognition Based on Constrained Nonnegative Tensor Factorization. 783-792
  
• Junzuo Lai, Wen Tao Zhu, Robert H. Deng, Shengli Liu, Weidong Kou:
  New Constructions for Identity-Based Unidirectional Proxy Re-Encryption. 793-806
  
• Qiong Huang, Duncan S. Wong:
  Generic Certificateless Encryption Secure Against Malicious-but-Passive KGC Attacks in the Standard Model. 807-826
  
• Yu Guo, Xinyu Jiang, Yiyun Chen:
  Certification of Thread Context Switching. 827-840
  
• Yong Li, Yu Zhang, Yiyun Chen, Ming Fu:
  Formal Reasoning About Lazy-STM Programs. 841-852
  
• Xiao-Wen Lou, Da-Ming Zhu:
  Sorting Unsigned Permutations by Weighted Reversals, Transpositions, and Transreversals. 853-863
  
• Zhifeng Yu, Weisong Shi:
  Queue Waiting Time Aware Dynamic Workflow Scheduling in Multicluster Environments. 864-873
  
• Yong Dou, Jie Zhou, Guiming Wu, Jingfei Jiang, Yuanwu Lei, Shi-Ce Ni:
  A Unified Co-Processor Architecture for Matrix Decomposition. 874-885
  
• Huimin Cui, Lei Wang, Dong-Rui Fan, Xiaobing Feng:
  Landing Stencil Code on Godson-T. 886-894
  

Volume 25, Number 5, September 2010

• Hsien-Hsi Hsieh, Chin-Chen Chang, Wen-Kai Tai, Han-Wei Shen:
  Novel Geometrical Voxelization Approach with Application to Streamlines. 895-904
  
• Takuma Kawamura, Naohisa Sakamoto, Koji Koyamada:
  Level-of-Detail Rendering of Large-Scale Irregular Volume Datasets Using Particles. 905-915
  
• Yi-Hong Wu, Tian Lan, Zhanyi Hu:
  Degeneracy from Twisted Cubic Under Two Views. 916-924
  
• Romain Pacanowski, Xavier Granier, Christophe Schlick, Pierre Poulin:
  Volumetric Vector-Based Representation for Indirect Illumination Caching. 925-932
  
• Jun-Ki Min, Mi-Young Lee:
  DICE: An Effective Query Result Cache for Distributed Storage Systems. 933-944
  
• Yan Li, Feng-Hong Chen, Xi Sun, Minghui Zhou, Wenpin Jiao, Donggang Cao, Hong Mei:
  Self-Adaptive Resource Management for Large-Scale Shared Clusters. 945-957
  
• Xiang-Yang Gong, Wen-Dong Wang, Shi-Duan Cheng:
  ERFC: An Enhanced Recursive Flow Classification Algorithm. 958-969
  
• Da Teng, Shoubao Yang, Weiqing He, Yun Hu:
  QoS-TEOS: QoS Guaranteed Throughput-Efficiency Optimal Distributed Scheduling in WiMAX Mesh Networks. 970-981
  
• Yi-Fei Chen, Xiaolin Qin, Liang Liu:
  Uncertain Distance-Based Range Queries over Uncertain Moving Objects. 982-998
  
• Salaheddin Odeh:
  Building Reusable Remote Labs with Adaptable Client User-Interfaces. 999-1015
  
• Jitender Kumar Chhabra, Varun Gupta:
  A Survey of Dynamic Software Metrics. 1016-1029
  
• Javier Tejada-Cárcamo, Hiram Calvo, Alexander F. Gelbukh, Kazuo Hara:
  Unsupervised WSD by Finding the Predominant Sense Using Context as a Dynamic Thesaurus. 1030-1039
  
• Kilho Shin, Tetsuji Kuboyama:
  A Generalization of Haussler's Convolution Kernel - Mapping Kernel and Its Application to Tree Kernels. 1040-1054
  
• Chaveevan Pechsiri, Rapepun Piriyakul:
  Explanation Knowledge Graph Construction Through Causality Extraction from Texts. 1055-1070
  
• Leonardo Liao, Yongqiang Wu, Chong-Zhao Han:
  Hierarchical Polytope ARTMAP for Supervised Learning. 1071-1082
  
• Hui Dai, Qiang Zhou, Jinian Bian:
  Multilevel Optimization for Large-Scale Hierarchical FPGA Placement. 1083-1091
  
• Xu-Guang Guan, Xing-Yuan Tong, Yin-Tang Yang:
  Quasi Delay-Insensitive High Speed Two-Phase Protocol Asynchronous Wrapper for Network on Chips. 1092-1100
  

Volume 25, Number 6, November 2010

• De-Yi Li, Zhiyong Liu, Ke-Qing He:
  Preface. 1101-1102
  
• Keqing He, Jian Wang, Peng Liang:
  Semantic Interoperability Aggregation in Service Requirements Refinement. 1103-1117
  
• Joonhoon Lee, Jeongmin Park, Giljong Yoo, Eunseok Lee:
  Goal-Based Automated Code Generation in Self-Adaptive System. 1118-1129
  
• Shouxin Wang, Li Zhang, Shuai Wang, Xiang Qiu:
  A Cloud-Based Trust Model for Evaluating Quality of Web Services. 1130-1142
  
• Mingwei Zhang, Bin Zhang, Ying Liu, Jun Na, Zhiliang Zhu:
  Web Service Composition Based on QoS Rules. 1143-1156
  
• Yan-Bo Han, Jun-Yi Sun, Gui-Ling Wang, Hou-Fu Li:
  A Cloud-Based BPM Architecture with User-End Distribution of Non-Compute-Intensive Activities and Sensitive Data. 1157-1167
  
• Xutao Du, Chun-Xiao Xing, Li-Zhu Zhou:
  Modeling and Verifying Concurrent Programs with Finite Chu Spaces. 1168-1183
  
• Yutao Ma, Keqing He, Bing Li, Jing Liu, Xiao-Yan Zhou:
  A Hybrid Set of Complexity Metrics for Large-Scale Object-Oriented Software Systems. 1184-1201
  
• Weifeng Pan, Bing Li, Yutao Ma, Yeyi Qin, Xiao-Yan Zhou:
  Measuring Structural Quality of Object-Oriented Softwares via Bug Propagation Analysis on Weighted Software Networks. 1202-1213
  
• Ming-Wen Chen, Jian Zhang, Songlin Hu, Zhiyong Liu:
  Covering-Based Routing Algorithms for Cyclic Content-Based P/S Overlays. 1214-1224
  
• Wei Du, Guohua Cui, Wei Liu:
  An Uncertainty Enhanced Trust Evolution Strategy for e-Science. 1225-1236
  
• Sherif Sakr, Ghazi Al-Naymat:
  Efficient Relational Techniques for Processing Graph Queries. 1237-1255
  
• Matti Pöllä, Timo Honkela:
  Negative Selection of Written Language Using Character Multiset Statistics. 1256-1266
  
• Antonio Fernández Anta, Ernesto Jiménez, Michel Raynal:
  Eventual Leader Election with Weak Assumptions on Initial Knowledge, Communication Reliability, and Synchrony. 1267-1281
  
• Hua Huang, Xiang-Wang Ma:
  Frontal and Semi-Frontal Facial Caricature Synthesis Using Non-Negative Matrix Factorization. 1282-1292
  
• Huaixi Wang, Yan Zhu, Rong-Quan Feng, Stephen S. Yau:
  Attribute-Based Signature with Policy-and-Endorsement Mechanism. 1293-1304
  
• Osman Hasan, Sofiène Tahar:
  Formally Analyzing Expected Time Complexity of Algorithms Using Theorem Proving. 1305-1320
  
• Yu-Ping Shen, Xi-Shun Zhao:
  NP-Logic Systems and Model-Equivalence Reductions. 1321-1326
  

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