Nucleic Acids Research, Volume 20

Volume 20, Number 1, January 1992

• Steffen Faisst, Silke Meyer:
  Compilation of vertebrate-encoded transcription factors. 3-26
  
• Ben Berkhout:
  Structural features in TAR RNA of human and simian immunodeficiency viruses: a phylogenetic analysis. 27-31
  
• Harald Hirling, Alice Emery-Goodman, Nancy Thompson, Barbara Neupert, Christian Seiser, Lukas C. Kühn:
  Expression of active iron regulatory factor from a full-length human cDNA by in vitro transcription/translation. 33-39
  
• Eberhard Scherzinger, Rudi Lurz, Sabine Otto, Beate Dobrinski:
  In vitro cleavage of double- and single-stranded DNA by plasmid RSF1010- encoded mobilization proteins. 41-48
  
• Alastair I. H. Murchie, David M. J. Lilley:
  Retinoblastoma susceptibility genes contain 5' sequences with a high propensity to form guanine-tetrad structures. 49-53
  
• Frank Seela, Angelika Roling:
  7-Deazapurine containing DNA: efficiency of c7GdTP, c7AdTP and c7IdTP incorporation during PCR-amplification and protection from endodeoxyribonuclease hydrolysis. 55-61
  
• Peter Pollwein, Colin L. Masters, Konrad Beyreuther:
  The expression of the amyloid precursor protein (APP) is regulated by two GC-elements in the promoter. 63-68
  
• Navin C. Khanna, Sujata Lakhani, Krishna K. Tewari:
  Identification of the template binding polypeptide in the pea chloroplast transcriptional complex. 69-74
  
• Elisabeth Waigmann, Andrea Barta:
  Processing of chimeric introns in dicot plants: evidence for a close cooperation between 5' and 3' splice sites. 75-81
  
• Hong Yu, Lauren Ernst, Marc Wagner, Alan Waggoner:
  Sensitive detection of RNAs in single cells by flow cytometry [published erratum appears in Nucleic Acids Res 1992 Oct 25;20(20): 5518]. 83-88
  
• Marie E. Petracek, Judith Berman:
  Chlamydomonas reinhardtii telomere repeats form unstable structures involving guanine-guanine base pairs. 89-95
  
• G. Patel, K. Nasmyth, N. Jones:
  A new method for the isolation of recombinant baculovirus. 97-104
  
• Abderrahim Malki, Renée Kern, Masamichi Kohiyama, Patrick Hughes:
  Inhibition of DNA synthesis at the hemimethylated pBR322 origin of replication by a cell membrane fraction. 105-109
  
• Rukmini Kolluri, Ted Albert Torrey, Alan J. Kinniburgh:
  A CT promoter element binding protein: definition of a double-strand and a novel single-strand DNA binding motif. 111-116
  
• Douglas W. Ball, Debra Compton, Barry D. Nelkin, Stephen B. Baylin, Andrée de Bustros:
  Human calcitonin gene regulation by helix-loop-helix recognition sequences. 117-123
  
• Jeroen den Hertog, Rolf P. de Groot, Siegfried W. de Laat, Wiebe Kruijer:
  EGF-induced jun B-expression in transfected P19 embryonal carcinoma cells expressing EGF-receptors is dependent on Jun D. 125-130
  
• Elisabetta Pizzi, Marcella Attimonelli, Sabino Liuni, Clara Frontali, Cecilia Saccone:
  A simple method for global sequence comparison. 131-136
  
• Ulf Grawunder, Astrid Schon, Mathias Sprinzl:
  Sequence and base modifications of two phenylalanine-tRNAs from Thermus thermophilus HB8. 137
  
• Jaya Sivaswami Tyagi, Asha Kiran Kinger:
  Identification of the 10Sa RNA structural gene of Mycobacterium tuberculosis. 138
  
• Y. Chang, M.-I. Chen, R. Wu, P. Chang, C. Shu, S. Liu:
  Sequence analysis of the BZLF 1 gene of Epstein-Barr virus derived from a new variant isolated in Taiwan. 139
  
• Te-Chung Lee, Robert J. Schwartz:
  Differential detection of multiple DNA-binding complexes using dissimilar polyanion competitors. 140
  
• D. L. Browne, M. Litt:
  Characterization of (CA)n microsatellites with degenerate sequencing primers. 141
  
• M. Guérin, P. Pélissier:
  A rapid method for measuring the steady state levels of mitochondrial RNA in whole mitochondria. 142
  
• Kojo Mensa-Wilmot, Paul T. Englund:
  Non-fusion proteins expressed in E. coli: detection by alpha- complementation (blue/white selection). 143
  
• Cortland J. Lohff, Kemp B. Cease:
  PCR using a thermostable polymerase with 3' to 5' exonuclease activity generates blunt products suitable for direct cloning. 144
  
• Eric P. H. Yap, James O'D. McGee:
  Nonisotopic SSCP and competitive PCR for DNA quantification: p53 in breast cancer cells. 145
  

Volume 20, Number 13, July 1992

• Tatyana V. Ilyina, Eugene V. Koonin:
  Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria. 3279-3285
  
• Dieter Lang, Helmut Fickenscher, Thomas Stamminger:
  Analysis of proteins binding to the proximal promoter region of the human cytomegalovirus IE-1/2 enhancer/promoter reveals both consensus and aberrant recognition sequences for transcription factors Sp1 and CREB. 3287-3295
  
• Judy Wynne, Richard Treisman:
  SRF and MCM1 have related but distinct DNA binding specificities. 3297-3303
  
• Takashi Yura, Hirotada Mori, Hiroki Nagai, Toshio Nagata, Akira Ishihama, Nobuyuki Fujita, Katsumi Isono, Kiyoshi Mizobuchi, Atsuo Nakata:
  Systematic sequencing of the Escherichia coli genome: analysis of the 0- 2.4 min region. 3305-3308
  
• Marianne Benard, Gérard Pierron:
  Mapping of a Physarum chromosomal origin of replication tightly linked to a developmentally-regulated profilin gene. 3309-3315
  
• Ralf Janknecht, Alfred Nordheim:
  Elk-1 protein domains required for direct and SRF-assisted DNA-binding. 3317-3324
  
• Hidehito Urata, Emiko Ogura, Keiko Shinohara, Yoshiaki Ueda, Masao Akagi:
  Synthesis and properties of mirror-image DNA. 3325-3332
  
• Ivo Galli, Sanae M. M. Iguchi-Ariga, Hiroyoshi Ariga:
  The AT-rich tract of the SV40 ori core: negative synergism and specific recognition by single stranded and duplex DNA binding proteins. 3333-3339
  
• Helen U. Enright, Wesley J. Miller, Robert P. Hebbel:
  Nucleosomal histone protein protects DNA from iron-mediated damage. 3341-3346
  
• James J. Champoux:
  Topoisomerase I is preferentially associated with normal SV40 replicative intermediates, but is associated with both replicating and nonreplicating SV40 DNAs which are deficient in histones. 3347-3352
  
• Dan S. Ray, Jane C. Hines, Mary Anderson:
  Kinetoplast-associated DNA topoisomerase in Crithidia fasciculata: crosslinking of mitochondrial topoisomerase II to both minicircles and maxicircles in cells treated with the topoisomerase inhibitor VP16. 3353-3356
  
• Hirokazu Kotani, Akira Kawamura, Asako Takahashi, Masako Nakatsuji, Nobutsugu Hiraoka, Kazuo Nakajima, Mituru Takanami:
  Site-specific dissection of E. coli chromosome by lambda terminase. 3357-3360
  
• Alain Guimond, Tom Moss:
  Variants of the Xenopus laevis ribosomal transcription factor xUBF are developmentally regulated by differential splicing. 3361-3366
  
• Paolo Colombo, Mike Fried:
  Functional elements of the ribosomal protein L7a (rpL7a) gene promoter region and their conservation between mammals and birds. 3367-3373
  
• Robbert G. van der Most, Leo Heijnen, Willy J. M. Spaan, Raoul J. de Groot:
  Homologous RNA recombination allows efficient introduction of site- specific mutations into the genome of coronavirus MHV-A59 via synthetic co-replicating RNAs. 3375-3381
  
• Holly L. Prentice, Robert E. Kingston:
  Mammalian promoter element function in the fission yeast Schizosaccharomyces pombe. 3383-3390
  
• Kevin Gaston, Andrew Bell, Stephen Busby, Mike Fried:
  A comparison of the DNA bending activities of the DNA binding proteins CRP and TFIID. 3391-3396
  
• Yves Quentin:
  Origin of the Alu family: a family of Alu-like monomers gave birth to the left and the right arms of the Alu elements. 3397-3401
  
• Sergei M. Gryaznov, Robert L. Letsinger:
  Synthesis and properties of oligonucleotides containing aminodeoxythymidine units. 3403-3409
  
• Calum MacKellar, Duncan Graham, David W. Will, Stephen Burgess, Tom Brown:
  Synthesis and physical properties of anti-HIV antisense oligonucleotides bearing terminal lipophilic groups. 3411-3417
  
• Heidi Major Sleister, Kathleen A. Mills, Sue E. Blackwell, Ann M. Killary, Jeffrey C. Murray, Robert E. Malone:
  Construction of a human chromosome 4 YAC pool and analysis of artificial chromosome stability. 3419-3425
  
• Tamara E. Cheyette, Tony Ip, Steven Faber, Yasuhisa Matsui, Roger Chalkley:
  Characterization of the factors binding to a PEPCK gene upstream hypersensitive site with LCR activity. 3427-3433
  
• Dvora Ronen, Yael Teitz, Naomi Goldfinger, Varda Rotter:
  Expression of wild-type and mutant p53 proteins by recombinant vaccinia viruses. 3435-3441
  
• Véronique Segault, Annie Mougin, Anne Grégoire, Josette Banroques, Christiane Branlant:
  An experimental study of Saccharomyces cerevisiae U3 snRNA conformation in solution. 3443-3451
  
• Gordon B. Hutchinson, Michael R. Hayden:
  The prediction of exons through an analysis of spliceable open reading frames. 3453-3462
  
• Grazyna E. Sroga, Fumiko Nemoto, Yoshiyuki Kuchino, Glenn R. Björk:
  Insertion (sufB) in the anticodon loop or base substitution (sufC) in the anticodon stem of tRNA(Pro)2 from Salmonella typhimurium induces suppression of frameshift mutations. 3463-3469
  
• Michael C. O'Neill:
  Escherichia coli promoters: neural networks develop distinct descriptions in learning to search for promoters of different spacing classes. 3471-3477
  
• Bernard Martin, Odile Humbert, Miguel Cámara, Eric Guenzi, John Walker, Timothy Mitchell, Peter Andrew, Marc Prudhomme, Geneviève Alloing, Regine Hakenbeck, Donald A. Morrison, Graham J. Boulnois, Jean-Pierre Claverys:
  A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumoniae. 3479-3483
  
• Douglas P. Kalinowski, Sharon Illenye, Ben Van Houten:
  Analysis of DNA damage and repair in murine leukemia L1210 cells using a quantitative polymerase chain reaction assay. 3485-3494
  
• T. W. Wang, A. S. Lewin, G. M. Small:
  A negative regulating element controlling transcription of the gene encoding acyl-CoA oxidase in Saccharomyces cerevisiae. 3495-3500
  
• Robert A. Stull, Leslie A. Taylor, Francis C. Szoka Jr.:
  Predicting antisense oligonucleotide inhibitory efficacy: a computational approach using histograms and thermodynamic indices. 3501-3508
  
• Nathalie Dinouël, Frédéric Sor, Hiroshi Fukuhara:
  Nucleotide sequence of transfer RNA genes from the linear mitochondrial DNA of the yeast Williopsis mrakii and Pichia pijperi. 3509
  
• Satoru Okumura, Hiroaki Shimada:
  Nucleotide sequence of genes for a 5.8S and 25S rRNA from rape seed (Brassica napus). 3510
  
• C. Luschnig, D. Schweizer:
  Nucleotide sequence of trnI(CAU) and rpl23 from Arabidopsis thaliana chloroplast genome [published erratum appears in Nucleic Acids Res 1992 Jul 25;20(14): 3814]. 3511
  
• Thein T. Aye, Toshikazu Uchida, Xue-Zhung Ma, Fusae Iida, Toshio Shikata, Hui Zhuang, Khin Maung Win:
  Complete nucleotide sequence of a hepatitis E virus isolated from the Xinjiang epidemic (1986-1988) of China. 3512
  
• Jozef Grones, Jan Turna:
  ApaCI, an isoschizomer of BamHI isolated from Acetobacter pasteurianus. 3513
  
• Jitsuhiro Matsugi, Katsutoshi Murao, Hisayuki Ishikura:
  Nucleotide sequence of tryptophan tRNA from Bacillus subtilis. 3514
  
• Makoto Hidaka, Yukiko Yoshida, Haruhiko Masaki, Shigetou Namba, Shuichi Yamashita, Tsuneo Tsuchizaki, Takeshi Uozumi:
  Cloning and sequencing of the 3' half of a potato virus Y (O strain) genome encoding the 5k protein, protease, polymerase and coat protein. 3515
  
• Wagner V. Yotov, René St-Arnaud:
  Nucleotide sequence of a mouse cDNA encoding the nonhistone chromosomal high mobility group protein-1 (HMG1). 3516
  
• Masahiro Kamekura, Yukio Seno:
  Nucleotide sequences of 16S rRNA encoding genes from halophilic archaea Halococcus morrhuae NRC16008 and Haloferax mediterranei ATCC33500. 3517
  
• Henrik Ørum, Henrik Nielsen, Jan Engberg:
  Sequence of a new snRNA from the ciliate Tetrahymena thermophila. 3518
  
• Ming-yu Wang, Michael Cutler, Iman Karimpour, Kenneth C. Kleene:
  Nucleotide sequence of a mouse testis poly(A) binding protein cDNA. 3519
  
• Jang H. Han, Michael Houghton:
  Group specific sequences and conserved secondary structures at the 3' end of HCV genome and its implication for viral replication. 3520
  
• M. Victoria Mendiola, Fernando de la Cruz:
  IS91 transposase is related to the rolling-circle-type replication proteins of the pUB110 family of plasmids. 3521
  
• J. L. Vaerman, P. Moureau, Y. Larondelle, P. Martiat, M. Philippe:
  Prediction of oligodeoxyribonucleotides eluting salt conditions on anion exchange column. 3522
  
• Andrew J. Bannister, Tony Kouzarides:
  Basic peptides enhance protein/DNA interaction in vitro. 3523
  
• Takashi Ito, Cassandra L. Smith, Charles R. Cantor:
  Triplex affinity capture of a single copy clone from a yeast genomic library. 3524
  
• Christopher J. Larson, Gregory L. Verdine:
  A high-capacity column for affinity purification of sequence-specific DNA-binding proteins. 3525
  
• Puloma Kamdar, Gretchen Von Allmen, Victoria Finnerty:
  Transient expression of DNA in Drosophila via electroporation. 3526
  
• Hinrich Abken, Barbara Reifenrath:
  A procedure to standardize CAT reporter gene assay. 3527
  
• Ignacio R. Rodriguez, Gerald J. Chader:
  A novel method for the isolation of tissue-specific genes. 3528
  
• Barry Milavetz:
  Preparation of nested deletions in single-strand DNA using oligonucleotides containing partially random base sequences. 3529-3530
  

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