IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 5

Volume 5, Number 1, January 2008

• Clare Bates Congdon, Joseph C. Aman, Gerardo M. Nava, H. Rex Gaskins, Carolyn J. Mattingly:
  An Evaluation of Information Content as a Metric for the Inference of Putative Conserved Noncoding Regions in DNA Sequences Using a Genetic Algorithms Approach. 1-14
  Electronic Edition (ACM DL) BibTeX
• Riccardo Boscolo, James C. Liao, Vwani P. Roychowdhury:
  An Information Theoretic Exploratory Method for Learning Patterns of Conditional Gene Coexpression from Microarray Data. 15-24
  Electronic Edition (ACM DL) BibTeX
• Kay C. Wiese, Alain Deschênes, Andrew Hendriks:
  RnaPredict-An Evolutionary Algorithm for RNA Secondary Structure Prediction. 25-41
  Electronic Edition (ACM DL) BibTeX
• Diego Rother, Guillermo Sapiro, Vijay Pande:
  Statistical Characterization of Protein Ensembles. 42-55
  Electronic Edition (ACM DL) BibTeX
• Yun Cui, Lusheng Wang, Daming Zhu, Xiaowen Liu:
  A (1.5 + epsilon)-Approximation Algorithm for Unsigned Translocation Distance. 56-66
  Electronic Edition (ACM DL) BibTeX
• Tuan Zea Tan, Geok See Ng, Chai Quek:
  A Novel Biologically and Psychologically Inspired Fuzzy Decision Support System: Hierarchical Complementary Learning. 67-79
  Electronic Edition (ACM DL) BibTeX
• Federica Ciocchetta, Corrado Priami, Paola Quaglia:
  An Automatic Translation of SBML into Beta-Binders. 80-90
  Electronic Edition (ACM DL) BibTeX
• Sebastian Böcker, Veli Mäkinen:
  Combinatorial Approaches for Mass Spectra Recalibration. 91-100
  Electronic Edition (ACM DL) BibTeX
• Tamar Barzuza, Jacques S. Beckmann, Ron Shamir, Itsik Pe'er:
  Computational Problems in Perfect Phylogeny Haplotyping: Typing without Calling the Allele. 101-109
  Electronic Edition (ACM DL) BibTeX
• Francis Y. L. Chin, Henry C. M. Leung:
  DNA Motif Representation with Nucleotide Dependency. 110-119
  Electronic Edition (ACM DL) BibTeX
• Zong-Xian Yin, Jung-Hsien Chiang:
  Novel Algorithm for Coexpression Detection in Time-Varying Microarray Data Sets. 120-135
  Electronic Edition (ACM DL) BibTeX
• Adrien Goëffon, Jean-Michel Richer, Jin-Kao Hao:
  Progressive Tree Neighborhood Applied to the Maximum Parsimony Problem. 136-145
  Electronic Edition (ACM DL) BibTeX

Volume 5, Number 2, April 2008

• Benjamin N. Jackson, Patrick S. Schnable, Srinivas Aluru:
  Consensus Genetic Maps as Median Orders from Inconsistent Sources. 161-171
  Electronic Edition (ACM DL) BibTeX
• Anupam Gupta, Ziv Bar-Joseph:
  Extracting Dynamics from Static Cancer Expression Data. 172-182
  Electronic Edition (ACM DL) BibTeX
• John Thomas, Naren Ramakrishnan, Chris Bailey-Kellogg:
  Graphical Models of Residue Coupling in Protein Families. 183-197
  Electronic Edition (ACM DL) BibTeX
• Jesus P. Mena-Chalco, Helaine Carrer, Yossi Zana, Roberto M. Cesar Jr.:
  Identification of Protein Coding Regions Using the Modified Gabor-Wavelet Transform. 198-207
  Electronic Edition (ACM DL) BibTeX
• Hidde de Jong, Michel Page:
  Search for Steady States of Piecewise-Linear Differential Equation Models of Genetic Regulatory Networks. 208-222
  Electronic Edition (ACM DL) BibTeX
• Avital Sadot, Jasmin Fisher, Dan Barak, Yishai Admanit, Michael J. Stern, E. Jane Albert Hubbard, David Harel:
  Toward Verified Biological Models. 223-234
  Electronic Edition (ACM DL) BibTeX
• Andreas Spillner, Binh T. Nguyen, Vincent Moulton:
  Computing Phylogenetic Diversity for Split Systems. 235-244
  Electronic Edition (ACM DL) BibTeX
• Giuseppe Lancia, R. Ravi, Romeo Rizzi:
  Haplotyping for Disease Association: A Combinatorial Approach. 245-251
  Electronic Edition (ACM DL) BibTeX
• Alexander Gusev, Ion I. Mandoiu, Bogdan Pasaniuc:
  Highly Scalable Genotype Phasing by Entropy Minimization. 252-261
  Electronic Edition (ACM DL) BibTeX
• Wentao Zhao, Erchin Serpedin, Edward R. Dougherty:
  Inferring Connectivity of Genetic Regulatory Networks Using Information-Theoretic Criteria. 262-274
  Electronic Edition (ACM DL) BibTeX
• Magnus Bordewich, Charles Semple:
  Nature Reserve Selection Problem: A Tight Approximation Algorithm. 275-280
  Electronic Edition (ACM DL) BibTeX
• Yong-Hsian Hsieh, Chih-Chiang Yu, Biing-Feng Wang:
  Optimal Algorithms for the Interval Location Problem with Range Constraints on Length and Average. 281-290
  Electronic Edition (ACM DL) BibTeX
• Susanna L. Lamers, Marco Salemi, Michael S. McGrath, Gary B. Fogel:
  Prediction of R5, X4, and R5X4 HIV-1 Coreceptor Usage with Evolved Neural Networks. 291-300
  Electronic Edition (ACM DL) BibTeX
• Leo van Iersel, Judith Keijsper, Steven Kelk, Leen Stougie:
  Shorelines of Islands of Tractability: Algorithms for Parsimony and Minimum Perfect Phylogeny Haplotyping Problems. 301-312
  Electronic Edition (ACM DL) BibTeX
• Dumitru Brinza, Alexander Zelikovsky:
  2SNP: Scalable Phasing Method for Trios and Unrelated Individuals. 313-318
  Electronic Edition (ACM DL) BibTeX