Transactions on Computational Systems Biology, Volume 11, 2009

Computational Models for Cell Processes

• Muffy Calder, Jane Hillston:
  Process Algebra Modelling Styles for Biomolecular Processes. 1-25
  
• Bogdan Aman, Gabriel Ciobanu:
  Simple, Enhanced and Mutual Mobile Membranes. 26-44
  
• Federica Ciocchetta:
  Bio-PEPA with Events. 45-68
  
• Dragan Bosnacki, Tessa E. Pronk, Erik P. de Vink:
  In Silico Modelling and Analysis of Ribosome Kinetics and aa-tRNA Competition. 69-89
  
• Maria Luisa Guerriero:
  Qualitative and Quantitative Analysis of a Bio-PEPA Model of the Gp130/JAK/STAT Signalling Pathway. 90-115
  
• Vincent Danos, Jérôme Feret, Walter Fontana, Russell Harmer, Jean Krivine:
  Rule-Based Modelling and Model Perturbation. 116-137
  
• Monika Heiner, Sebastian Lehrack, David Gilbert, Wolfgang Marwan:
  Extended Stochastic Petri Nets for Model-Based Design of Wetlab Experiments. 138-163
  
• Maria Pamela C. David, Johnrob Y. Bantang, Eduardo R. Mendoza:
  A Projective Brane Calculus with Activate, Bud and Mate as Primitive Actions. 164-186
  
• Jürgen Dassow, Victor Mitrana:
  Accepting Networks of Non-inserting Evolutionary Processors. 187-199
  
• John Jack, Andrei Paun:
  Discrete Modeling of Biochemical Signaling with Memory Enhancement. 200-215
  
• Luca Bortolussi, Alberto Policriti:
  Dynamical Systems and Stochastic Programming: To Ordinary Differential Equations and Back. 216-267
  
• Graziano Chesi:
  Computing Equilibrium Points of Genetic Regulatory Networks. 268-282
  
• Rodrick Wallace, Deborah Wallace:
  Code, Context, and Epigenetic Catalysis in Gene Expression. 283-334