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Can Alkan
2010 – today
- 2013
[j11]Hongyi Xin, Donghyuk Lee, Farhad Hormozdiari, Samihan Yedkar, Onur Mutlu, Can Alkan: Accelerating read mapping with FastHASH. BMC Genomics 14(S-1): S13 (2013)- 2012
- [j10]Farhad Hormozdiari, Faraz Hach, Süleyman Cenk Sahinalp, Evan E. Eichler, Can Alkan: Sensitive and fast mapping of di-base encoded reads. Bioinformatics 28(1): 150 (2012)
- [j9]Faraz Hach, Ibrahim Numanagic, Can Alkan, Süleyman Cenk Sahinalp: SCALCE: boosting sequence compression algorithms using locally consistent encoding. Bioinformatics 28(23): 3051-3057 (2012)
- 2011
- [j8]Farhad Hormozdiari, Faraz Hach, Süleyman Cenk Sahinalp, Evan E. Eichler, Can Alkan: Sensitive and fast mapping of di-base encoded reads. Bioinformatics 27(14): 1915-1921 (2011)
- [c5]Can Alkan, Emidio Capriotti, Eleazar Eskin, Fereydoun Hormozdiari, Maricel G. Kann: Session Introduction. Pacific Symposium on Biocomputing 2011: 229-230
- 2010
- [j7]Iman Hajirasouliha, Fereydoun Hormozdiari, Can Alkan, Jeffrey M. Kidd, Inanç Birol, Evan E. Eichler, Süleyman Cenk Sahinalp: Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. Bioinformatics 26(10): 1277-1283 (2010)
- [j6]Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach, Deniz Yörükoglu, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp: Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery. Bioinformatics [ISMB] 26(12): 350-357 (2010)
- [c4]Can Alkan, Michael Brudno, Evan E. Eichler, Maricel G. Kann, Süleyman Cenk Sahinalp: Session Introduction. Pacific Symposium on Biocomputing 2010: 302-304
2000 – 2009
- 2009
- [c3]Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp: Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes. RECOMB 2009: 218-219
- 2007
- [j5]Cagri Aksay, Raheleh Salari, Emre Karakoç, Can Alkan, Süleyman Cenk Sahinalp: taveRNA: a web suite for RNA algorithms and applications. Nucleic Acids Research 35(Web-Server-Issue): 325-329 (2007)
- [j4]Can Alkan, Mario Ventura, Nicoletta Archidiacono, Mariano Rocchi, Süleyman Cenk Sahinalp, Evan E. Eichler: Organization and Evolution of Primate Centromeric DNA from Whole-Genome Shotgun Sequence Data. PLoS Computational Biology 3(9) (2007)
- 2006
- [j3]Can Alkan, Emre Karakoç, Joseph H. Nadeau, Süleyman Cenk Sahinalp, Kaizhong Zhang: RNA-RNA Interaction Prediction and Antisense RNA Target Search. Journal of Computational Biology 13(2): 267-282 (2006)
- [c2]Can Alkan, Emre Karakoç, Süleyman Cenk Sahinalp, Peter J. Unrau, H. Alexander Ebhardt, Kaizhong Zhang, Jeremy Buhler: RNA Secondary Structure Prediction Via Energy Density Minimization. RECOMB 2006: 130-142
- 2005
- [j2]Can Alkan, Eray Tüzün, Jerome Buard, Franck Lethiec, Evan E. Eichler, Jeffrey A. Bailey, Süleyman Cenk Sahinalp: Manipulating multiple sequence alignments via MaM and WebMaM. Nucleic Acids Research 33(Web-Server-Issue): 295-298 (2005)
- [c1]Can Alkan, Emre Karakoç, Joseph H. Nadeau, Süleyman Cenk Sahinalp, Kaizhong Zhang: RNA-RNA Interaction Prediction and Antisense RNA Target Search. RECOMB 2005: 152-171
- 2004
- [j1]Can Alkan, Evan E. Eichler, Jeffrey A. Bailey, Süleyman Cenk Sahinalp, Eray Tüzün: The Role of Unequal Crossover in Alpha-Satellite DNA Evolution: A Computational Analysis. Journal of Computational Biology 11(5): 933-944 (2004)
Coauthor Index
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last updated on 2013-06-13 23:08 CEST by the dblp team