Joel S. Bader

Yongjin Park, Joel S. Bader: How networks change with time. Bioinformatics 28(12): 40-48 (2012)

Faris Alqadah, Joel S. Bader, Rajul Anand, Chandan K. Reddy: Query-based Biclustering using Formal Concept Analysis. SDM 2012: 648-659

Yongjin Park, Joel S. Bader: Resolving the structure of interactomes with hierarchical agglomerative clustering. BMC Bioinformatics 12(S-1): S44 (2011)

Corban G. Rivera, Rachit Vakil, Joel S. Bader: NeMo: Network Module identification in Cytoscape. BMC Bioinformatics 11(S-1): 61 (2010)

Hailiang Huang, Joel S. Bader: Precision and recall estimates for two-hybrid screens. Bioinformatics 25(3): 372-378 (2009)

Balaji Veeramani, Joel S. Bader: Metabolic Flux Correlations, Genetic Interactions, and Disease. Journal of Computational Biology 16(2): 291-302 (2009)

Sarah M. Richardson, Brian S. Olson, Jessica S. Dymond, Randal Burns, Srinivasan Chandrasegaran, Jef D. Boeke, Amarda Shehu, Joel S. Bader: Automated Design of Assemblable, Modular, Synthetic Chromosomes. PPAM (2) 2009: 280-289

Hailiang Huang, Bruno Jedynak, Joel S. Bader: Where Have All the Interactions Gone? Estimating the Coverage of Two-Hybrid Protein Interaction Maps. PLoS Computational Biology 3(11) (2007)

L. Angela Liu, Joel S. Bader: Ab initio Prediction of Transcription Factor Binding Sites. Pacific Symposium on Biocomputing 2007: 484-495

Hailiang Huang, Lan V. Zhang, Frederick P. Roth, Joel S. Bader: Probabilistic Paths for Protein Complex Inference. Systems Biology and Computational Proteomics 2006: 14-28

Ping Ye, Brian D. Peyser, Forrest A. Spencer, Joel S. Bader: Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast. BMC Bioinformatics 6: 270 (2005)

Yan Qi, Ping Ye, Joel S. Bader: Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthetic lethality. BMC Bioinformatics 6: 288 (2005)

Ivan Iossifov, Michael Krauthammer, Carol Friedman, Vasileios Hatzivassiloglou, Joel S. Bader, Kevin P. White, Andrey Rzhetsky: Probabilistic inference of molecular networks from noisy data sources. Bioinformatics 20(8): 1205-1213 (2004)

Joel S. Bader: Greedily building protein networks with confidence. Bioinformatics 19(15): 1869-1874 (2003)