David E. Bernholdt

Wael R. Elwasif, David E. Bernholdt, Sreekanth Pannala, Srikanth Allu, Samantha S. Foley: Parameter Sweep and Optimization of Loosely Coupled Simulations Using the DAKOTA Toolkit. CSE 2012: 102-110

Aniruddha G. Shet, Wael R. Elwasif, Samantha S. Foley, Byung H. Park, David E. Bernholdt, Randall Bramley: Strategies for Fault Tolerance in Multicomponent Applications. Procedia CS 4: 2287-2296 (2011)

Wael R. Elwasif, David E. Bernholdt, Samantha S. Foley, Aniruddha G. Shet, Randall Bramley: Multi-level concurrency in a framework for integrated loosely coupled plasma simulations. AICCSA 2011: 188-195

Byung H. Park, Thomas J. Naughton, Pratul K. Agarwal, David E. Bernholdt, Al Geist, Jennifer L. Tippens: Realization of User Level Fault Tolerant Policy Management through a Holistic Approach for Fault Correlation. POLICY 2011: 17-24

Wael R. Elwasif, David E. Bernholdt, Aniruddha G. Shet, Samantha S. Foley, Randall Bramley, Donald B. Batchelor, Lee A. Berry: The Design and Implementation of the SWIM Integrated Plasma Simulator. PDP 2010: 419-427

Frank Siebenlist, Rachana Ananthakrishnan, David E. Bernholdt, Luca Cinquini, Ian T. Foster, Don Middleton, Neill Miller, Dean N. Williams: Enhancing the earth system grid security infrastructure through single sign-on and autoprovisioning. SC-GCE 2009

Aniruddha G. Shet, P. Sadayappan, David E. Bernholdt, Jarek Nieplocha, Vinod Tipparaju: A framework for characterizing overlap of communication and computation in parallel applications. Cluster Computing 11(1): 75-90 (2008)

Meili Chen, Al Geist, David E. Bernholdt, Kasidit Chanchio, Daniel L. Million: The design and prototype of RUDA, a distributed grid accounting system. IJCIS 4(3): 296-307 (2008)

Wesley Kendall, Markus Glatter, Jian Huang, Forrest Hoffmann, David E. Bernholdt: Web enabled collaborative climate visualization in the Earth System Grid. CTS 2008: 212-220

Aniruddha G. Shet, Wael R. Elwasif, Robert J. Harrison, David E. Bernholdt: Programmability of the HPCS Languages: A case study with a quantum chemistry kernel. IPDPS 2008: 1-8

David E. Bernholdt: Special Issue: Component and Framework Technology in High-Performance and Scientific Computing. Concurrency and Computation: Practice and Experience 19(5): 571-572 (2007)

David E. Bernholdt, Shishir Bharathi, David Brown, Kasidit Chanchio, Meili Chen, Ann L. Chervenak, Luca Cinquini, Bob Drach, Ian T. Foster, Peter Fox, Jose Garcia, Carl Kesselman, Rob S. Markel, Don Middleton, Veronika Nefedova, Line Pouchard, Arie Shoshani, Alex Sim, Gary Strand, Dean N. Williams: The Earth System Grid: Supporting the Next Generation of Climate Modeling Research. CoRR abs/0712.2262 (2007)

David E. Bernholdt, Benjamin A. Allan, Robert C. Armstrong, Felipe Bertrand, Kenneth Chiu, Tamara Dahlgren, Kostadin Damevski, Wael R. Elwasif, Thomas Epperly, Madhusudhan Govindaraju, Daniel S. Katz, James Arthur Kohl, Manojkumar Krishnan, Gary Kumfert, Jay Walter Larson, Sophia Lefantzi, Michael J. Lewis, Allen D. Malony, Lois C. McInnes, Jarek Nieplocha, Boyana Norris, Steven G. Parker, Jaideep Ray, Sameer Shende, Theresa L. Windus, Shujia Zhou: A Component Architecture for High-Performance Scientific Computing. IJHPCA 20(2): 163-202 (2006)

James Arthur Kohl, Torsten Wilde, David E. Bernholdt: Cumulvs: Interacting with High-Performance Scientific Simulations, for Visualization, Steering and Fault Tolerance. IJHPCA 20(2): 255-285 (2006)

Felipe Bertrand, Randall Bramley, David E. Bernholdt, James Arthur Kohl, Alan Sussman, Jay Walter Larson, Kostadin Damevski: Data redistribution and remote method invocation for coupled components. J. Parallel Distrib. Comput. 66(7): 931-946 (2006)

Christian Engelmann, Stephen L. Scott, David E. Bernholdt, Narasimha Raju Gottumukkala, Chokchai Leangsuksun, Jyothish Varma, Chao Wang, Frank Mueller, Aniruddha G. Shet, P. Sadayappan: MOLAR: adaptive runtime support for high-end computing operating and runtime systems. Operating Systems Review 40(2): 63-72 (2006)

Aniruddha G. Shet, P. Sadayappan, David E. Bernholdt, Jarek Nieplocha, Vinod Tipparaju: A Performance Instrumentation Framework to Characterize Computation-Communication Overlap in Message-Passing Systems. CLUSTER 2006

Ann L. Chervenak, Jennifer M. Schopf, Laura Pearlman, Mei-Hui Su, Shishir Bharathi, Luca Cinquini, Mike D'Arcy, Neill Miller, David E. Bernholdt: Monitoring the Earth System Grid with MDS4. e-Science 2006: 69

Albert Hartono, Qingda Lu, Xiaoyang Gao, Sriram Krishnamoorthy, Marcel Nooijen, Gerald Baumgartner, David E. Bernholdt, Venkatesh Choppella, Russell M. Pitzer, J. Ramanujam, Atanas Rountev, P. Sadayappan: Identifying Cost-Effective Common Subexpressions to Reduce Operation Count in Tensor Contraction Evaluations. International Conference on Computational Science (1) 2006: 267-275

Line Pouchard, Andrew Woolf, David E. Bernholdt: Data Grid discovery and Semantic Web technologies for the earth sciences. Int. J. on Digital Libraries 5(2): 72-83 (2005)

Albert Hartono, Alexander Sibiryakov, Marcel Nooijen, Gerald Baumgartner, David E. Bernholdt, So Hirata, Chi-Chung Lam, Russell M. Pitzer, J. Ramanujam, P. Sadayappan: Automated Operation Minimization of Tensor Contraction Expressions in Electronic Structure Calculations. International Conference on Computational Science (1) 2005: 155-164

Wael R. Elwasif, Donald B. Batchelor, David E. Bernholdt, Lee A. Berry, Eduardo F. D'Azevedo, Wayne A. Houlberg, E. F. Jaeger, James Arthur Kohl, Shuhui Li: Coupled Fusion Simulation Using the Common Component Architecture. International Conference on Computational Science (1) 2005: 372-379

M. L. Chen, Al Geist, David E. Bernholdt, Kasidit Chanchio, Daniel L. Million: The Design and Prototype of RUDA, a Distributed Grid Accounting System. ICCSA (3) 2005: 29-38

Felipe Bertrand, Randall Bramley, Alan Sussman, David E. Bernholdt, James Arthur Kohl, Jay Walter Larson, Kostadin Damevski: Data Redistribution and Remote Method Invocation in Parallel Component Architectures. IPDPS 2005

Boyana Norris, Jaideep Ray, Robert C. Armstrong, Lois C. McInnes, David E. Bernholdt, Wael R. Elwasif, Allen D. Malony, Sameer Shende: Computational Quality of Service for Scientific Components. CBSE 2004: 264-271

David E. Bernholdt: High-Performance Parallel and Distributed Scientific Computing with the Common Component Architecture. International Conference on Computational Science 2004: 1

Line Pouchard, Luca Cinquini, Bob Drach, Don Middleton, David E. Bernholdt, Kasidit Chanchio, Ian T. Foster, Veronika Nefedova, David Brown, Peter Fox, Jose Garcia, Gary Strand, Dean N. Williams, Ann L. Chervenak, Carl Kesselman, Arie Shoshani, Alex Sim: An Ontology for Scientific Information in a Grid Environment: the Earth System Grid. CCGRID 2003: 626-632

Sandhya Krishnan, Sriram Krishnamoorthy, Gerald Baumgartner, Daniel Cociorva, Chi-Chung Lam, P. Sadayappan, J. Ramanujam, David E. Bernholdt, Venkatesh Choppella: Data Locality Optimization for Synthesis of Efficient Out-of-Core Algorithms. HiPC 2003: 406-417

Alina Bibireata, Sandhya Krishnan, Gerald Baumgartner, Daniel Cociorva, Chi-Chung Lam, P. Sadayappan, J. Ramanujam, David E. Bernholdt, Venkatesh Choppella: Memory-Constrained Data Locality Optimization for Tensor Contractions. LCPC 2003: 93-108

Benjamin A. Allan, Robert C. Armstrong, Alicia P. Wolfe, Jaideep Ray, David E. Bernholdt, James Arthur Kohl: The CCA core specification in a distributed memory SPMD framework. Concurrency and Computation: Practice and Experience 14(5): 323-345 (2002)

Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: An Experimental Evaluation of I/O Optimizations on Different Applications. IEEE Trans. Parallel Distrib. Syst. 13(7): 728-744 (2002)

Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: An Experimental Evaluation of I/O Optimizations on Different Applications. IEEE Trans. Parallel Distrib. Syst. 13(12): 1303-1319 (2002)

Gerald Baumgartner, David E. Bernholdt, Daniel Cociorva, Chi-Chung Lam, J. Ramanujam, Robert J. Harrison, Marcel Nooijen, P. Sadayappan: A Performance Optimization Framework for Compilation of Tensor Contraction Expressions into Parallel Programs. IPDPS 2002

Daniel Cociorva, Gerald Baumgartner, Chi-Chung Lam, P. Sadayappan, J. Ramanujam, Marcel Nooijen, David E. Bernholdt, Robert J. Harrison: Space-Time Trade-Off Optimization for a Class of Electronic Structure Calculations. PLDI 2002: 177-186

David E. Bernholdt, Wael R. Elwasif, James Arthur Kohl: Communication Infrastructure in High-Performance Component-Based Scientific Computing. PVM/MPI 2002: 260-270

Gerald Baumgartner, David E. Bernholdt, Daniel Cociorva, Robert J. Harrison, So Hirata, Chi-Chung Lam, Marcel Nooijen, Russell M. Pitzer, J. Ramanujam, P. Sadayappan: A high-level approach to synthesis of high-performance codes for quantum chemistry. SC 2002: 1-10

Daniel Cociorva, J. W. Wilkins, Gerald Baumgartner, P. Sadayappan, J. Ramanujam, Marcel Nooijen, David E. Bernholdt, Robert J. Harrison: Towards Automatic Synthesis of High-Performance Codes for Electronic Structure Calculations: Data Locality Optimization. HiPC 2001: 237-248

Wael R. Elwasif, David E. Bernholdt, James Arthur Kohl, G. A. Geist II: An Architecture for a Multi-threaded Harness Kernel. PVM/MPI 2001: 126-134

David E. Bernholdt: Scalability of correlated electronic structure calculations on parallel computers: A case study of the RI-MP2 method. Parallel Computing 26(7-8): 945-963 (2000)

Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: Performance Implications of Architectural and Software Techniques on I/O-Intensive Applications. ICPP 1998: 493-

Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: Optimization and Evaluation of Hartree-Fock Application's I/O with PASSION. SC 1997: 31

Robert J. Harrison, Martyn F. Guest, Ricky A. Kendall, David E. Bernholdt, Adrian T. Wong, Mark Stave, James L. Anchell, Anthony C. Hess, Rik J. Littlefield, George L. Fann, Jarek Nieplocha, Greg S. Thomas, David Elwood, Jeffrey L. Tilson, Ron L. Shepard, Albert F. Wagner, Ian T. Foster, Ewing L. Lusk, Rick Stevens: Toward high-performance computational chemistry: II. A scalable self-consistent field program. Journal of Computational Chemistry 17(1): 124-132 (1996)

Martyn F. Guest, Edoardo Aprà, David E. Bernholdt, Herbert A. Früchtl, Robert J. Harrison, Ricky A. Kendall, R. A. Kutteh, X. Long, John B. Nicholas, J. A. Nicholas, H. L. Tylor, Adrian T. Wong, G. J. Fann, Richard J. Littlefield, Jarek Nieplocha: High Performance Computational Chemistry: NWChem and Fully Distributed Parallel Applications. PARA 1995: 278-294