Philippe Bessières

Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Érick Alphonse, Maarten van de Guchte, Philippe Bessières, Claire Nedellec: BioNLP Shared Task - The Bacteria Track. BMC Bioinformatics 13(S-11): S3 (2012)

Alain-Pierre Manine, Érick Alphonse, Philippe Bessières: Extraction of Genic Interactions with the Recursive Logical Theory of an Ontology. CICLing 2010: 549-563

Pierre Nicolas, Aurélie Leduc, Stéphane Robin, Simon Rasmussen, Hanne Jarmer, Philippe Bessières: Transcriptional landscape estimation from tiling array data using a model of signal shift and drift. Bioinformatics 25(18): 2341-2347 (2009)

Alain-Pierre Manine, Érick Alphonse, Philippe Bessières: Learning ontological rules to extract multiple relations of genic interactions from text. I. J. Medical Informatics 78(12): 31-38 (2009)

Alain-Pierre Manine, Érick Alphonse, Philippe Bessières: Information Extraction as an Ontology Population Task and Its Application to Genic Interactions. ICTAI (2) 2008: 74-81

Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nedellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher: Event-based Information Extraction for the biomedical domain: the Caderige project. CoRR abs/cs/0609135 (2006)

Alain Lelu, Philippe Bessières, Alain Zasadzinski, Dominique Besagni: Extraction de processus fonctionnels en génétique des microbes à partir de résumés MEDLINE. EGC 2004: 441-452

Mark Hoebeke, Pierre Nicolas, Philippe Bessières: MuGeN: Simultaneous Exploration of Multiple Genomes and Computer Analysis Results. Bioinformatics 19(7): 859-864 (2003)

Mark Hoebeke, Hélène Chiapello, Philippe Noirot, Philippe Bessières: SPiD: a subtilis protein interaction database. Bioinformatics 17(12): 1209-1212 (2001)

Claire Nedellec, Mohamed Ould Abdel Vetah, Philippe Bessières: Sentence Filtering for Information Extraction in Genomics, a Classification Problem. PKDD 2001: 326-337

Guy Perrière, Philippe Bessières, Bernard Labedan: EMGLib: the Enhanced Microbial Genomes Library (update 2000). Nucleic Acids Research 28(1): 68-71 (2000)

Guy Perrière, Philippe Bessières, Bernard Labedan: The Enhanced Microbial Genomes Library. Nucleic Acids Research 27(1): 63-65 (1999)

Laurent Bize, Florence Muri, Franck Samson, François Rodolphe, S. Dusko Ehrlich, Bernard Prun, Philippe Bessières: Searching gene transfers on Bacillus subtilis using hidden Markov models. RECOMB 1999: 43-49

V. Biaudet, Franck Samson, Philippe Bessières: Micado - a network-oriented database for microbial genomes. Computer Applications in the Biosciences 13(4): 431-438 (1997)