Valentina Boeva

Valentina Boeva, Tatiana Popova, Kevin Bleakley, Pierre Chiche, Julie Cappo, Gudrun Schleiermacher, Isabelle Janoueix-Lerosey, Olivier Delattre, Emmanuel Barillot: Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data. Bioinformatics 28(3): 423-425 (2012)

Valentina Boeva, Alban Lermine, Camille Barette, Christel Guillouf, Emmanuel Barillot: Nebula - a web-server for advanced ChIP-seq data analysis. Bioinformatics 28(19): 2517-2519 (2012)

Valentina Boeva, Andrei Zinovyev, Kevin Bleakley, Jean-Philippe Vert, Isabelle Janoueix-Lerosey, Olivier Delattre, Emmanuel Barillot: Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization. Bioinformatics 27(2): 268-269 (2011)

Bruno Zeitouni, Valentina Boeva, Isabelle Janoueix-Lerosey, Sophie Loeillet, Patricia Legoix-né, Alain Nicolas, Olivier Delattre, Emmanuel Barillot: SVDetect: a tool to identify genomic structural variations from paired-end and mate-pair sequencing data. Bioinformatics 26(15): 1895-1896 (2010)

Ivan V. Kulakovskiy, Valentina Boeva, Alexander V. Favorov, Vsevolod Makeev: Deep and wide digging for binding motifs in ChIP-Seq data. Bioinformatics 26(20): 2622-2623 (2010)

Valentina Boeva, Julien Clément, Mireille Régnier, Mikhail A. Roytberg, Vsevolod Makeev: Exact p-value calculation for heterotypic clusters of regulatory motifs and its application in computational annotation of cis-regulatory modules. Algorithms for Molecular Biology 2 (2007)

Valentina Boeva, Mireille Régnier, Dmitri A. Papatsenko, Vsevolod Makeev: Short fuzzy tandem repeats in genomic sequences, identification, and possible role in regulation of gene expression. Bioinformatics 22(6): 676-684 (2006)

Valentina Boeva, Julien Clément, Mireille Régnier, Mathias Vandenbogaert: Assessing the Significance of Sets of Words. CPM 2005: 358-370