Shawn Bowers

Paolo Missier, Bertram Ludäscher, Saumen C. Dey, Michael Wang, Timothy M. McPhillips, Shawn Bowers, Michael Agun, Ilkay Altintas: Golden Trail: Retrieving the Data History that Matters from a Comprehensive Provenance Repository. IJDC 7(1): 139-150 (2012)

Shawn Bowers: Scientific Workflow, Provenance, and Data Modeling Challenges and Approaches. J. Data Semantics 1(1): 19-30 (2012)

Huiping Cao, Shawn Bowers, Mark P. Schildhauer: Database Support for Enabling Data-Discovery Queries over Semantically-Annotated Observational Data. T. Large-Scale Data- and Knowledge-Centered Systems 6: 198-228 (2012)

Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher: Declarative Rules for Inferring Fine-Grained Data Provenance from Scientific Workflow Execution Traces. IPAW 2012: 82-96

Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher: Database Support for Exploring Scientific Workflow Provenance Graphs. SSDBM 2012: 343-360

Anastasia Ailamaki, Shawn Bowers (Eds.): Scientific and Statistical Database Management - 24th International Conference, SSDBM 2012, Chania, Crete, Greece, June 25-27, 2012. Proceedings. Lecture Notes in Computer Science 7338, Springer 2012, isbn 978-3-642-31234-2

Ilkay Altintas, Manish Kumar Anand, Trung N. Vuong, Shawn Bowers, Bertram Ludäscher, Peter M. A. Sloot: A Data Model for Analyzing User Collaborations in Workflow-Driven e-Science. I. J. Comput. Appl. 18(3): 160-179 (2011)

Huiping Cao, Shawn Bowers, Mark P. Schildhauer: Approaches for Semantically Annotating and Discovering Scientific Observational Data. DEXA (1) 2011: 526-541

Lei Dou, Daniel Zinn, Timothy M. McPhillips, Sven Köhler, Sean Riddle, Shawn Bowers, Bertram Ludäscher: Scientific workflow design 2.0: Demonstrating streaming data collections in Kepler. ICDE 2011: 1296-1299

Wesley Saunders, Shawn Bowers, Margaret O'Brien: Protege Extensions for Scientist-Oriented Modeling of Observation and Measurement Semantics. OWLED 2011

Michael Agun, Shawn Bowers: Approaches for Implementing Persistent Queues within Data-Intensive Scientific Workflows. SERVICES 2011: 200-207

Judith Bayard Cushing, James C. French, Shawn Bowers (Eds.): Scientific and Statistical Database Management - 23rd International Conference, SSDBM 2011, Portland, OR, USA, July 20-22, 2011. Proceedings. Lecture Notes in Computer Science 6809, Springer 2011, isbn 978-3-642-22350-1

Shawn Bowers, Joshua S. Madin, Mark P. Schildhauer: Owlifier: Creating OWL-DL ontologies from simple spreadsheet-based knowledge descriptions. Ecological Informatics 5(1): 19-25 (2010)

Daniel Zinn, Shawn Bowers, Sven Köhler, Bertram Ludäscher: Parallelizing XML data-streaming workflows via MapReduce. J. Comput. Syst. Sci. 76(6): 447-463 (2010)

Shawn Bowers, Huiping Cao, Mark Schildhauer, Matthew B. Jones, Ben Leinfelder, Margaret O'Brien: A semantic annotation framework for retrieving and analyzing observational datasets. ESAIR 2010: 31-32

Shawn Bowers, Jay Kudo, Huiping Cao, Mark P. Schildhauer: ObsDB: A System for Uniformly Storing and Querying Heterogeneous Observational Data. eScience 2010: 261-268

Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher: Techniques for efficiently querying scientific workflow provenance graphs. EDBT 2010: 287-298

David Thau, Shawn Bowers, Bertram Ludäscher: Towards best-effort merge of taxonomically organized data. ICDE Workshops 2010: 151-154

Daniel Zinn, Shawn Bowers, Bertram Ludäscher: XML-based computation for scientific workflows. ICDE 2010: 812-815

Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher: Provenance browser: Displaying and querying scientific workflow provenance graphs. ICDE 2010: 1201-1204

Manish Kumar Anand, Shawn Bowers, Ilkay Altintas, Bertram Ludäscher: Approaches for Exploring and Querying Scientific Workflow Provenance Graphs. IPAW 2010: 17-26

Ilkay Altintas, Manish Kumar Anand, Daniel Crawl, Shawn Bowers, Adam Belloum, Paolo Missier, Bertram Ludäscher, Carole A. Goble, Peter M. A. Sloot: Understanding Collaborative Studies through Interoperable Workflow Provenance. IPAW 2010: 42-58

Timothy M. McPhillips, Shawn Bowers, Daniel Zinn, Bertram Ludäscher: Scientific workflow design for mere mortals. Future Generation Comp. Syst. 25(5): 541-551 (2009)

David Thau, Shawn Bowers, Bertram Ludäscher: Merging Taxonomies under RCC-5 Algebraic Articulations. JCSE 3(2): 109-126 (2009)

David Thau, Shawn Bowers, Bertram Ludäscher: CleanTax: A Framework for Reasoning about Taxonomies. AAAI Spring Symposium: Benchmarking of Qualitative Spatial and Temporal Reasoning Systems 2009: 49-50

Bertram Ludäscher, Mathias Weske, Timothy M. McPhillips, Shawn Bowers: Scientific Workflows: Business as Usual? BPM 2009: 31-47

Chad Berkley, Shawn Bowers, Matthew B. Jones, Joshua S. Madin, Mark Schildhauer: Improving Data Discovery for Metadata Repositories through Semantic Search. CISIS 2009: 1152-1159

Manish Kumar Anand, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher: Efficient provenance storage over nested data collections. EDBT 2009: 958-969

Daniel Zinn, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher: X-CSR: Dataflow Optimization for Distributed XML Process Pipelines. ICDE 2009: 577-580

David Thau, Shawn Bowers, Bertram Ludäscher: Merging Sets of Taxonomically Organized Data Using Concept Mappings under Uncertainty. OTM Conferences (2) 2009: 1103-1120

Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher: A navigation model for exploring scientific workflow provenance graphs. SC-WORKS 2009

Daniel Zinn, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher: Scientific workflow design with data assembly lines. SC-WORKS 2009

Manish Kumar Anand, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher: Exploring Scientific Workflow Provenance Using Hybrid Queries over Nested Data and Lineage Graphs. SSDBM 2009: 237-254

Bertram Ludäscher, Shawn Bowers, Timothy M. McPhillips: Scientific Workflows. Encyclopedia of Database Systems 2009: 2507-2511

Luc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul T. Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao, Yong Zhao: Special Issue: The First Provenance Challenge. Concurrency and Computation: Practice and Experience 20(5): 409-418 (2008)

Bertram Ludäscher, Norbert Podhorszki, Ilkay Altintas, Shawn Bowers, Timothy M. McPhillips: From computation models to models of provenance: the RWS approach. Concurrency and Computation: Practice and Experience 20(5): 507-518 (2008)

Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher: Provenance in collection-oriented scientific workflows. Concurrency and Computation: Practice and Experience 20(5): 519-529 (2008)

Deana D. Pennington, Ioannis N. Athanasiadis, Shawn Bowers, Sergey Krivov, Joshua S. Madin, Mark Schildhauer, Ferdinando Villa: Indirectly driven knowledge modelling in ecology. IJMSO 3(3): 210-225 (2008)

David Thau, Shawn Bowers, Bertram Ludäscher: Merging taxonomies under RCC-5 algebraic articulations. ONISW 2008: 47-54

Shawn Bowers, Joshua S. Madin, Mark P. Schildhauer: A Conceptual Modeling Framework for Expressing Observational Data Semantics. ER 2008: 41-54

Shawn Bowers, Timothy M. McPhillips, Sean Riddle, Manish Kumar Anand, Bertram Ludäscher: Kepler/pPOD: Scientific Workflow and Provenance Support for Assembling the Tree of Life. IPAW 2008: 70-77

Anne H. H. Ngu, Shawn Bowers, Nicholas Haasch, Timothy M. McPhillips, Terence Critchlow: Flexible Scientific Workflow Modeling Using Frames, Templates, and Dynamic Embedding. SSDBM 2008: 566-572

Susan B. Davidson, Sarah Cohen Boulakia, Anat Eyal, Bertram Ludäscher, Timothy M. McPhillips, Shawn Bowers, Manish Kumar Anand, Juliana Freire: Provenance in Scientific Workflow Systems. IEEE Data Eng. Bull. 30(4): 44-50 (2007)

Joshua S. Madin, Shawn Bowers, Mark Schildhauer, Sergey Krivov, Deana Pennington, Ferdinando Villa: An ontology for describing and synthesizing ecological observation data. Ecological Informatics 2(3): 279-296 (2007)

Shawn Bowers, Timothy M. McPhillips, Martin Wu, Bertram Ludäscher: Project Histories: Managing Data Provenance Across Collection-Oriented Scientific Workflow Runs. DILS 2007: 122-138

Shawn Bowers, Lois M. L. Delcambre: Using the uni-level description (ULD) to support data-model interoperability. Data Knowl. Eng. 59(3): 511-533 (2006)

Timothy M. McPhillips, Shawn Bowers, Bertram Ludäscher: Collection-Oriented Scientific Workflows for Integrating and Analyzing Biological Data. DILS 2006: 248-263

Bertram Ludäscher, Shawn Bowers, Timothy M. McPhillips, Norbert Podhorszki: Scientific Workflows: More e-Science Mileage from Cyberinfrastructure. e-Science 2006: 145

Shawn Bowers, Bertram Ludäscher: A Calculus for Propagating Semantic Annotations Through Scientific Workflow Queries. EDBT Workshops 2006: 712-723

Shawn Bowers, Bertram Ludäscher, Anne H. H. Ngu, Terence Critchlow: Enabling ScientificWorkflow Reuse through Structured Composition of Dataflow and Control-Flow. ICDE Workshops 2006: 70

Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher, Shirley Cohen, Susan B. Davidson: A Model for User-Oriented Data Provenance in Pipelined Scientific Workflows. IPAW 2006: 133-147

Timothy M. McPhillips, Shawn Bowers: An approach for pipelining nested collections in scientific workflows. SIGMOD Record 34(3): 12-17 (2005)

William Michener, James Beach, Shawn Bowers, Laura L. Downey, Matthew B. Jones, Bertram Ludäscher, Deana Pennington, Arcot Rajasekar, Samantha Romanello, Mark Schildhauer, David Vieglais, Jianting Zhang: Data Integration and Workflow Solutions for Ecology. DILS 2005: 321-324

Shawn Bowers, Bertram Ludäscher: Actor-Oriented Design of Scientific Workflows. ER 2005: 369-384

Samantha Romanello, James Beach, Shawn Bowers, Matthew B. Jones, Bertram Ludäscher, William Michener, Deana Pennington, Arcot Rajasekar, Mark Schildhauer: Creating and Providing Data Management Services for the Biological and Ecological Sciences: Science Environment for Ecological Knowledge. SSDBM 2005: 28-31

Chad Berkley, Shawn Bowers, Matthew B. Jones, Bertram Ludäscher, Mark Schildhauer, Jing Tao: Incorporating Semantics in Scientific Workflow Authoring. SSDBM 2005: 75-78

Shawn Bowers, Bertram Ludäscher: Towards Automatic Generation of Semantic Types in Scientific Workflows. WISE Workshops 2005: 207-216

Sudarshan Murthy, Lois M. L. Delcambre, David Maier, Shawn Bowers: Putting Integrated Information in Context: Superimposing Conceptual Models with SPARCE. APCCM 2004: 71-80

Shawn Bowers, Bertram Ludäscher: An Ontology-Driven Framework for Data Transformation in Scientific Workflows. DILS 2004: 1-16

Shawn Bowers, Lois M. L. Delcambre: Incremental Navigation: Providing Simple and Generic Access to Heterogeneous Structures. ER 2004: 668-681

Sudarshan Murthy, David Maier, Lois M. L. Delcambre, Shawn Bowers: Superimposed Applications using SPARCE. ICDE 2004: 861

Shawn Bowers, David Thau, Rich Williams, Bertram Ludäscher: Data Procurement for Enabling Scientific Workflows: On Exploring Inter-ant Parasitism. SWDB 2004: 57-63

Shawn Bowers, Kai Lin, Bertram Ludäscher: On Integrating Scientific Resources through Semantic Registration. SSDBM 2004: 349-352

Shawn Bowers, Lois M. L. Delcambre: On Modeling Conformance for Flexible Transformation over Data Models. Knowledge Transformation for the Semantic Web 2003: 34-48

Marianne Koch, Lois M. L. Delcambre, Patricia Toccalino, Eric Landis, Fred Phillips, Timothy Tolle, Len Shapiro, Nicole Steckler, David Maier, Mathew Weaver, Shawn Bowers, Balbinder Banga, Jason Brewster, Afrem Gutema, Sudarshan Murthy, Bill Howe, Rupa Tummala, Julia Norman, Kirsten Zilman, David Drake, Craig Palmer, Ashley Burt: The Forest Portal: A Multidisciplinary Project. DG.O 2003

Shawn Bowers, Lois M. L. Delcambre: The Uni-level Description: A Uniform Framework for Representing Information in Multiple Data Models. ER 2003: 45-58

Shawn Bowers, Lois M. L. Delcambre, David Maier: Enriching Documents in an Information Portal using Superimposed Schematics. DG.O 2002

Shawn Bowers, Lois M. L. Delcambre, David Maier: Superimposed Schematics: Introducing E-R Structure for In-Situ Information Selections. ER 2002: 90-104

Lois M. L. Delcambre, David Maier, Shawn Bowers, Mathew Weaver, Longxing Deng, Paul N. Gorman, Joan S. Ash, Mary Lavelle, Jason A. Lyman: Bundles in Captivity: An Application of Superimposed Information. ICDE 2001: 111-120

Paul N. Gorman, Joan S. Ash, Mary Lavelle, Jason A. Lyman, Lois M. L. Delcambre, David Maier, Mathew Weaver, Shawn Bowers: Bundles in the Wild: Managing Information to Solve Problems and Maintain Situation Awareness. Library Trends 49(2) (2000)

Heather M. Hinton, Crispin Cowan, Lois M. L. Delcambre, Shawn Bowers: SAM: Security Adaptation Manager . ACSAC 1999: 361-370