Robert Brijder

Robert Brijder, Hendrik Jan Hoogeboom: Nullity and Loop Complementation for Delta-Matroids. SIAM J. Discrete Math. 27(1): 492-506 (2013)

Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche: The DNA query language DNAQL. ICDT 2013: 1-9

Robert Brijder, Hendrik Jan Hoogeboom: Binary Symmetric Matrix Inversion Through Local Complementation. Fundam. Inform. 116(1-4): 15-23 (2012)

Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche: A comparison of graph-theoretic DNA hybridization models. Theor. Comput. Sci. 429: 46-53 (2012)

Robert Brijder, Tero Harju, Hendrik Jan Hoogeboom: Pivots, determinants, and perfect matchings of graphs. Theor. Comput. Sci. 454: 64-71 (2012)

Robert Brijder, Andrzej Ehrenfeucht, Grzegorz Rozenberg: Representing Reaction Systems by Trees. Computation, Physics and Beyond 2012: 330-342

Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche: A Type System for DNAQL. DNA 2012: 12-24

Robert Brijder, Hendrik Jan Hoogeboom: The group structure of pivot and loop complementation on graphs and set systems. Eur. J. Comb. 32(8): 1353-1367 (2011)

Robert Brijder, Andrzej Ehrenfeucht, Michael G. Main, Grzegorz Rozenberg: A Tour of reaction Systems. Int. J. Found. Comput. Sci. 22(7): 1499-1517 (2011)

Francesco Bernardini, Robert Brijder, Matteo Cavaliere, Giuditta Franco, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: On aggregation in multiset-based self-assembly of graphs. Natural Computing 10(1): 17-38 (2011)

Robert Brijder, Andrzej Ehrenfeucht, Grzegorz Rozenberg: Reaction Systems with Duration. Computation, Cooperation, and Life 2011: 191-202

Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche: Graph-Theoretic Formalization of Hybridization in DNA Sticker Complexes. DNA 2011: 49-63

Robert Brijder, Hendrik Blockeel: Characterizing Compressibility of Disjoint Subgraphs with NLC Grammars. LATA 2011: 167-178

Robert Brijder, Hendrik Jan Hoogeboom: Maximal pivots on graphs with an application to gene assembly. Discrete Applied Mathematics 158(18): 1977-1985 (2010)

Robert Brijder, Andrzej Ehrenfeucht, Grzegorz Rozenberg: A Note on Causalities in Reaction Systems. ECEASST 30 (2010)

Robert Brijder, Miika Langille, Ion Petre: Extended strings and graphs for simple gene assembly. Theor. Comput. Sci. 411(4-5): 730-738 (2010)

Robert Brijder, Hendrik Jan Hoogeboom: Combining overlap and containment for gene assembly in ciliates. Theor. Comput. Sci. 411(6): 897-905 (2010)

Robert Brijder, Hendrik Jan Hoogeboom: Pivot and Loop Complementation on Graphs and Set Systems. TAMC 2010: 151-162

Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: Reduction Graphs from Overlap Graphs for Gene Assembly in Ciliates. Int. J. Found. Comput. Sci. 20(2): 271-291 (2009)

Robert Brijder, Hendrik Jan Hoogeboom: Perfectly quilted rectangular snake tilings. Theor. Comput. Sci. 410(16): 1486-1494 (2009)

Robert Brijder, Hendrik Jan Hoogeboom: Maximal Pivots on Graphs with an Application to Gene Assembly. CoRR abs/0909.3789 (2009)

Robert Brijder, Hendrik Jan Hoogeboom: The Group Structure of Pivot and Loop Complementation on Graphs and Set Systems. CoRR abs/0909.4004 (2009)

Robert Brijder, Hendrik Jan Hoogeboom: Nullity Invariance for Pivot and the Interlace Polynomial. CoRR abs/0912.0878 (2009)

Robert Brijder, Hendrik Jan Hoogeboom: The fibers and range of reduction graphs in ciliates. Acta Inf. 45(5): 383-402 (2008)

Robert Brijder, Hendrik Jan Hoogeboom, Michael Muskulus: Strategies of loop recombination in ciliates. Discrete Applied Mathematics 156(10): 1736-1753 (2008)

Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan: Membrane systems with proteins embedded in membranes. Theor. Comput. Sci. 404(1-2): 26-39 (2008)

Robert Brijder, Hendrik Jan Hoogeboom: Extending the Overlap Graph for Gene Assembly in Ciliates. LATA 2008: 137-148

Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan: Membrane Systems with Marked Membranes. Electr. Notes Theor. Comput. Sci. 171(2): 25-36 (2007)

Francesco Bernardini, Robert Brijder, Grzegorz Rozenberg, Claudio Zandron: Multiset-Based Self-Assembly of Graphs. Fundam. Inform. 75(1-4): 49-75 (2007)

Michael Muskulus, Daniela Besozzi, Robert Brijder, Paolo Cazzaniga, Sanne Houweling, Dario Pescini, Grzegorz Rozenberg: Cycles and communicating classes in membrane systems and molecular dynamics. Theor. Comput. Sci. 372(2-3): 242-266 (2007)

Robert Brijder, Hendrik Jan Hoogeboom: Characterizing Reduction Graphs for Gene Assembly in Ciliates. Developments in Language Theory 2007: 120-131

Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: From Micro to Macro: How the Overlap Graph Determines the Reduction Graph in Ciliates. FCT 2007: 149-160

Robert Brijder, Miika Langille, Ion Petre: A String-Based Model for Simple Gene Assembly. FCT 2007: 161-172

Robert Brijder, Hendrik Jan Hoogeboom: Extending the Overlap Graph for Gene Assembly in Ciliates. CoRR abs/0712.3380 (2007)

Robert Brijder, Hendrik Jan Hoogeboom: The Fibers and Range of Reduction Graphs in Ciliates. CoRR abs/cs/0702041 (2007)

Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: How Overlap Determines the Macronuclear Genes in Ciliates. CoRR abs/cs/0702171 (2007)

Michael Muskulus, Robert Brijder: Complexity of bio-computation: symbolic dynamics in membrane systems. Int. J. Found. Comput. Sci. 17(1): 147-165 (2006)

Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan: Communication Membrane Systems with Active Symports. Journal of Automata, Languages and Combinatorics 11(3): 241-261 (2006)

Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: Reducibility of gene patterns in ciliates using the breakpoint graph. Theor. Comput. Sci. 356(1-2): 26-45 (2006)

Robert Brijder, Hendrik Jan Hoogeboom, Michael Muskulus: Applicability of Loop Recombination in Ciliates Using the Breakpoint Graph. CompLife 2006: 97-106

Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan: Membrane Systems with External Control. Workshop on Membrane Computing 2006: 215-232

Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: Reducibility of Gene Patterns in Ciliates using the Breakpoint Graph. CoRR abs/cs/0601122 (2006)

Robert Brijder, Hendrik Jan Hoogeboom, Michael Muskulus: Strategies of Loop Recombination in Ciliates. CoRR abs/cs/0601135 (2006)

Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: The Breakpoint Graph in Ciliates. CompLife 2005: 128-139