Patrick O. Brown

Robert J. Marinelli, Kelli Montgomery, Chih Long Liu, Nigam H. Shah, Wijan Prapong, Michael Nitzberg, Zachariah K. Zachariah, Gavin Sherlock, Yasodha Natkunam, Robert B. West, Matt van de Rijn, Patrick O. Brown, Catherine A. Ball: The Stanford Tissue Microarray Database. Nucleic Acids Research 36(Database-Issue): 871-877 (2008)

Janos Demeter, Catherine Beauheim, Jeremy Gollub, Tina Hernandez-Boussard, Heng Jin, Donald Maier, John C. Matese, Michael Nitzberg, Farrell Wymore, Zachariah K. Zachariah, Patrick O. Brown, Gavin Sherlock, Catherine A. Ball: The Stanford Microarray Database: implementation of new analysis tools and open source release of software. Nucleic Acids Research 35(Database-Issue): 766-770 (2007)

Catherine A. Ball, Ihab A. B. Awad, Janos Demeter, Jeremy Gollub, Joan M. Hebert, Tina Hernandez-Boussard, Heng Jin, John C. Matese, Michael Nitzberg, Farrell Wymore, Zachariah K. Zachariah, Patrick O. Brown, Gavin Sherlock: The Stanford Microarray Database accommodates additional microarray platforms and data formats. Nucleic Acids Research 33(Database-Issue): 580-582 (2005)

Kamesh Munagala, Robert Tibshirani, Patrick O. Brown: Cancer characterization and feature set extraction by discriminative margin clustering. BMC Bioinformatics 5: 21 (2004)

Jeremy Gollub, Catherine A. Ball, Gail Binkley, Janos Demeter, David B. Finkelstein, Joan M. Hebert, Tina Hernandez-Boussard, Heng Jin, Miroslava Kaloper, John C. Matese, Mark Schroeder, Patrick O. Brown, David Botstein, Gavin Sherlock: The Stanford Microarray Database: data access and quality assessment tools. Nucleic Acids Research 31(1): 94-96 (2003)

Maximilian Diehn, Gavin Sherlock, Gail Binkley, Heng Jin, John C. Matese, Tina Hernandez-Boussard, Christian A. Rees, J. Michael Cherry, David Botstein, Patrick O. Brown, Ash A. Alizadeh: SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data. Nucleic Acids Research 31(1): 219-223 (2003)

Olga G. Troyanskaya, Mitchell E. Garber, Patrick O. Brown, David Botstein, Russ B. Altman: Nonparametric methods for identifying differentially expressed genes in microarray data. Bioinformatics 18(11): 1454-1461 (2002)

Olga G. Troyanskaya, Michael Cantor, Gavin Sherlock, Patrick O. Brown, Trevor Hastie, Robert Tibshirani, David Botstein, Russ B. Altman: Missing value estimation methods for DNA microarrays. Bioinformatics 17(6): 520-525 (2001)

Gavin Sherlock, Tina Hernandez-Boussard, Andrew Kasarskis, Gail Binkley, John C. Matese, Selina S. Dwight, Miroslava Kaloper, Shuai Weng, Heng Jin, Catherine A. Ball, Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein, J. Michael Cherry: The Stanford Microarray Database. Nucleic Acids Research 29(1): 152-155 (2001)

Derek Y. Chiang, Patrick O. Brown, Michael B. Eisen: Visualizing associations between genome sequences and gene expression data using genome-mean expression profiles. ISMB (Supplement of Bioinformatics) 2001: 49-55