Anita Burgun

Charles Bettembourg, Christian Diot, Anita Burgun, Olivier Dameron: GO2PUB: Querying PubMed with semantic expansion of gene ontology terms. J. Biomedical Semantics 3: 7 (2012)

Adrien Barton, Anita Burgun, Régis Duvauferrier: Probability assignments to dispositions in ontologies. FOIS 2012: 3-14

Fleur Mougin, Anita Burgun, Olivier Bodenreider: Comparing drug-class membership in ATC and NDF-RT. IHI 2012: 437-444

Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia: OWL Model of Clinical Trial Eligibility Criteria Compatible with Partially-known Information. SWAT4LS 2012

Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun, Olivier Dameron: Verification of parameters semantic compatibility for semi-automatic web service composition: a generic case study. iiWAS 2010: 845-848

Paolo Besana, Marc Cuggia, Oussama Zekri, Annabel Bourde, Anita Burgun: Using Semantic Web Technologies for Clinical Trial Recruitment. International Semantic Web Conference (2) 2010: 34-49

Paolo Besana, Marc Cuggia, Oussama Zekri, Annabel Bourde, Anita Burgun: From French EHR to NCI ontology via UMLS. OM 2010

Fleur Mougin, Olivier Bodenreider, Anita Burgun: Analyzing polysemous concepts from a clinical perspective: Application to auditing concept categorization in the UMLS. Journal of Biomedical Informatics 42(3): 440-451 (2009)

Florence Amardeilh, Cédric Bousquet, Sylvie Guillemin-Lanne, Mathilde Wiss-Thebault, Laetitia Guillot, Denis Delamarre, Agnès Lillo-Le Louët, Anita Burgun: A Knowledge Management Platform for Documentation of Case Reports in Pharmacovigilance. MIE 2009: 517-521

Valérie Bertaud, Jérémy Lasbleiz, Fleur Mougin, Anita Burgun, Régis Duvauferrier: A unified representation of findings in clinical radiology using the UMLS and DICOM. I. J. Medical Informatics 77(9): 621-629 (2008)

Fleur Mougin, Anita Burgun, Olivier Bodenreider, Julie Chabalier, Olivier Loréal, Pierre Le Beux: Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System. DILS 2008: 61-76

Delphine Rossille, Anita Burgun, Céline Pangault-Lorho, Thierry Fest: Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research. MIE 2008: 455-460

Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun: Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies. Artificial Intelligence in Medicine 39(3): 183-195 (2007)

Julie Chabalier, Jean Mosser, Anita Burgun: A transversal approach to predict gene product networks from ontology-based similarity. BMC Bioinformatics 8 (2007)

Fleur Mougin, Julie Chabalier, Olivier Bodenreider, Anita Burgun: Méthodes de mapping situées aux niveaux instance et schéma pour l'intégration de sources de données hétérogènes. Actes d'IC 2007: 37-49

Julie Chabalier, Jean Mosser, Anita Burgun: Integrating Biological Pathways in Disease Ontologies. MedInfo 2007: 791-795

Marc Aubry, Annabelle Monnier, Celine Chicault, Marie de Tayrac, Marie-Dominique Galibert, Anita Burgun, Jean Mosser: Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets. BMC Bioinformatics 7: 241 (2006)

Fleur Mougin, Anita Burgun, Olivier Bodenreider: Mapping data elements to terminological resources for integrating biomedical data sources. BMC Bioinformatics 7(S-3) (2006)

Anita Burgun, Stéfan Jacques Darmoni, Franck Le Duff, Jacques Wéber: Problem-based learning in medical informatics for undergraduate medical students: An experiment in two medical schools. I. J. Medical Informatics 75(5): 396-402 (2006)

Paul Fabry, Robert H. Baud, Anita Burgun, Christian Lovis: Amplification of Terminologia anatomica by French language terms using Latin terms matching algorithm: A prototype for other language. I. J. Medical Informatics 75(7): 542-552 (2006)

Anita Burgun: Desiderata for domain reference ontologies in biomedicine. Journal of Biomedical Informatics 39(3): 307-313 (2006)

Emilie Guérin, Gwenaëlle Marquet, Julie Chabalier, Marie-Bérengère Troadec, Christiane Guguen-Guillouzo, Olivier Loréal, Anita Burgun, Fouzia Moussouni: Combining biomedical knowledge and transcriptomic data to extract new knowledge on genes. J. Integrative Bioinformatics 3(2) (2006)

Nicolas Garcelon, Fleur Mougin, Cédric Bousquet, Anita Burgun: Evidence in pharmacovigilance: extracting Adverse Drug Reactions articles from MEDLINE to link them to case databases. MIE 2006: 528-533

Gwenaëlle Marquet, Jean Mosser, Anita Burgun: Aligning biomedical ontologies using lexical methods and the UMLS: the case of Disease ontologies. MIE 2006: 781-786

Pierre Zweigenbaum, Robert H. Baud, Anita Burgun, Fiammetta Namer, Éric Jarrousse, Natalia Grabar, Patrick Ruch, Franck Le Duff, Jean-François Forget, Magaly Douyère, Stéfan Jacques Darmoni: UMLF: a unified medical lexicon for French. I. J. Medical Informatics 74(2-4): 119-124 (2005)

Delphine Rossille, Jean-François Laurent, Anita Burgun: Modelling a decision-support system for oncology using rule-based and case-based reasoning methodologies. I. J. Medical Informatics 74(2-4): 299-306 (2005)

Emilie Guérin, Gwenaëlle Marquet, Anita Burgun, Olivier Loréal, Laure Berti-Equille, Ulf Leser, Fouzia Moussouni: Integrating and Warehousing Liver Gene Expression Data and Related Biomedical Resources in GEDAW. DILS 2005: 158-174

Olivier Bodenreider, Marc Aubry, Anita Burgun: Non-Lexical Approaches to Identifying Associative Relations in the Gene Ontology. Pacific Symposium on Biocomputing 2005: 104-115

Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun: Investigating subsumption in DL-based terminologies: A Case Study in SNOMED CT . KR-MED 2004: 12-20

André Happe, Bruno Pouliquen, Anita Burgun, Marc Cuggia, Pierre Le Beux: Automatic concept extraction from spoken medical reports. I. J. Medical Informatics 70(2-3): 255-263 (2003)

Christian Jacquelinet, Anita Burgun, Denis Delamarre, Nigel Strang, Sami Djabbour, Bernard Boutin, Pierre Le Beux: Developing the ontological foundations of a terminological system for end-stage diseases, organ failure, dialysis and transplantation. I. J. Medical Informatics 70(2-3): 317-328 (2003)

Elizabeth Medélez Ortega, Anita Burgun, Franck Le Duff, Pierre Le Beux: Collaborative environment for clinical reasoning and distance learning sessions. I. J. Medical Informatics 70(2-3): 345-351 (2003)

Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun: How to Represent Medical Ontologies in View of a Semantic Web? AIME 2003: 51-60

Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun: Web Ontology Language Requirements w.r.t Expressiveness of Taxonomy and Axioms in Medicine. International Semantic Web Conference 2003: 180-194

Olivier Bodenreider, Anita Burgun, Thomas C. Rindflesch: Assessing the consistency of a biomedical terminology through lexical knowledge. I. J. Medical Informatics 67(1-3): 85-95 (2002)

Olivier Bodenreider, Thomas C. Rindflesch, Anita Burgun: Unsupervised, corpus-based method for extending a biomedical terminology. ACL Workshop on Natural Language Processing in the Biomedical Domain 2002: 53-60

Anita Burgun, Olivier Bodenreider: Aspects of the taxonomic relation in the biomedical domain. FOIS 2001: 222-233

Olivier Bodenreider, Anita Burgun, Geneviève Botti, Marius Fieschi, Pierre Le Beux, François Kohler: Case Report: Evaluation of the Unified Medical Language System as a Medical Knowledge Source. JAMIA 5(1): 76-87 (1998)

Anita Burgun, Patrick Denier, Olivier Bodenreider, Geneviève Botti, Denis Delamarre, Bruno Pouliquen, Philippe Oberlin, Jean M. Lévéque, Bertrand Lukacs, François Kohler, Marius Fieschi, Pierre Le Beux: Application of Information Technology: A Web Terminology Server Using UMLS for the Description of Medical Procedures. JAMIA 4(5): 356-363 (1997)