Cyrus Chothia

Tony E. Lewis, Ian Sillitoe, Antonina Andreeva, Tom L. Blundell, Daniel W. A. Buchan, Cyrus Chothia, Alison L. Cuff, Jose M. Dana, Ioannis Filippis, Julian Gough, Sarah Hunter, David T. Jones, Lawrence A. Kelley, Gerard J. Kleywegt, Federico Minneci, Alex Mitchell, Alexey G. Murzin, Bernardo Ochoa-Montaño, Owen J. L. Rackham, James Smith, Michael J. E. Sternberg, Sameer Velankar, Corin Yeats, Christine A. Orengo: Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Nucleic Acids Research 41(Database-Issue): 499-507 (2013)

David A. de Lima Morais, Hai Fang, Owen J. L. Rackham, Derek Wilson, Ralph Pethica, Cyrus Chothia, Julian Gough: SUPERFAMILY 1.75 including a domain-centric gene ontology method. Nucleic Acids Research 39(Database-Issue): 427-434 (2011)

Derek Wilson, Ralph Pethica, Yiduo Zhou, Charles Talbot, Christine Vogel, Martin Madera, Cyrus Chothia, Julian Gough: SUPERFAMILY - sophisticated comparative genomics, data mining, visualization and phylogeny. Nucleic Acids Research 37(Database-Issue): 380-386 (2009)

Antonina Andreeva, Dave Howorth, John-Marc Chandonia, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin: Data growth and its impact on the SCOP database: new developments. Nucleic Acids Research 36(Database-Issue): 419-425 (2008)

Derek Wilson, Martin Madera, Christine Vogel, Cyrus Chothia, Julian Gough: The SUPERFAMILY database in 2007: families and functions. Nucleic Acids Research 35(Database-Issue): 308-313 (2007)

Christine Vogel, Cyrus Chothia: Protein Family Expansions and Biological Complexity. PLoS Computational Biology 2(5) (2006)

Emmanuel D. Levy, José B. Pereira-Leal, Cyrus Chothia, Sarah A. Teichmann: 3D Complex: A Structural Classification of Protein Complexes. PLoS Computational Biology 2(11) (2006)

Antonina Andreeva, Dave Howorth, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin: SCOP database in 2004: refinements integrate structure and sequence family data. Nucleic Acids Research 32(Database-Issue): 226-229 (2004)

Martin Madera, Christine Vogel, Sarah K. Kummerfeld, Cyrus Chothia, Julian Gough: The SUPERFAMILY database in 2004: additions and improvements. Nucleic Acids Research 32(Database-Issue): 235-239 (2004)

Loredana Lo Conte, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin: SCOP database in 2002: refinements accommodate structural genomics. Nucleic Acids Research 30(1): 264-267 (2002)

Julian Gough, Cyrus Chothia: SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments. Nucleic Acids Research 30(1): 268-272 (2002)

Jong Park, Liisa Holm, Cyrus Chothia: Sequence search algorithm assessment and testing toolkit (SAT). Bioinformatics 16(2): 104-110 (2000)

Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong Park: Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL. Bioinformatics 16(2): 117-124 (2000)

Jong Park, Liisa Holm, Andreas Heger, Cyrus Chothia: RSDB: representative protein sequence databases have high information content. Bioinformatics 16(5): 458-464 (2000)

Ognyan Stoyanov, Alexander Kister, Israel Gelfand, Casimir A. Kulikowski, Cyrus Chothia: Geometric Invariant Core for the CL and CH1 Domains of Immunoglobulin Molecules. Journal of Computational Biology 7(5): 673-684 (2000)

Loredana Lo Conte, Bart Ailey, Tim J. P. Hubbard, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia: SCOP: a Structural Classification of Proteins database. Nucleic Acids Research 28(1): 257-259 (2000)

Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong Park: PDB_ISL: an intermediate sequence library for protein structure assignment. RECOMB 2000: 283-289

Tim J. P. Hubbard, Bart Ailey, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia: SCOP: a Structural Classification of Proteins database. Nucleic Acids Research 27(1): 254-256 (1999)

Sarah A. Teichmann, Jong Park, Cyrus Chothia: Genome sequences and protein structures. RECOMB 1999: 114

Tim J. P. Hubbard, Alexey G. Murzin, Steven E. Brenner, Cyrus Chothia: SCOP: a structural classification of proteins database. Nucleic Acids Research 25(1): 236-239 (1997)