Patrick Clarysse

Tristan Glatard, Carole Lartizien, Bernard Gibaud, Rafael Ferreira da Silva, Germain Forestier, Frederic Cervenansky, Martino Alessandrini, Hugues Benoit-Cattin, Olivier Bernard, Sorina Camarasu-Pop, Nadia Cerezo, Patrick Clarysse, Alban Gaignard, Patrick Hugonnard, Hervé Liebgott, Simon Marache, Adrien Marion, Johan Montagnat, Joachim Tabary, Denis Friboulet: A Virtual Imaging Platform for Multi-Modality Medical Image Simulation. IEEE Trans. Med. Imaging 32(1): 110-118 (2013)

Herve Lombaert, Jean-Marc Peyrat, Pierre Croisille, Stanislas Rapacchi, Laurent Fanton, Farida Cheriet, Patrick Clarysse, Isabelle E. Magnin, Hervé Delingette, Nicholas Ayache: Human Atlas of the Cardiac Fiber Architecture: Study on a Healthy Population. IEEE Trans. Med. Imaging 31(7): 1436-1447 (2012)

Jessica Lebenberg, Irène Buvat, Alain Lalande, Patrick Clarysse, Christopher Casta, Alexandre Cochet, Constantin Constantinides, Jean Cousty, Alain De Cesare, Stéphanie Jehan-Besson, Muriel Lefort, Laurent Najman, Elodie Roullot, Laurent Sarry, Christophe Tilmant, Mireille Garreau, Frédérique Frouin: Nonsupervised Ranking of Different Segmentation Approaches: Application to the Estimation of the Left Ventricular Ejection Fraction From Cardiac Cine MRI Sequences. IEEE Trans. Med. Imaging 31(8): 1651-1660 (2012)

Bernard Gibaud, Germain Forestier, Hugues Benoit-Cattin, Frederic Cervenansky, Patrick Clarysse, Denis Friboulet, Alban Gaignard, Patrick Hugonnard, Carole Lartizien, Hervé Liebgott, Johan Montagnat, Joachim Tabary, Tristan Glatard: OntoVIP: An Ontology for the Annotation of Object Models Used for Medical Image Simulation. HISB 2012: 110

Vicky Y. Wang, Christopher Casta, Pierre Croisille, Patrick Clarysse, Yue-Min Zhu, Brett R. Cowan, Alistair A. Young, Martyn P. Nash: Estimation of in vivo human myocardial fibre strain by integrating diffusion tensor and tagged MRI using FE modelling. ISBI 2012: 46-49

Tristan Glatard, Adrien Marion, Hugues Benoit-Cattin, Sorina Camarasu-Pop, Patrick Clarysse, Rafael Ferreira da Silva, Germain Forestier, Bernard Gibaud, Carole Lartizien, Hervé Liebgott, Kevin Moulin, Denis Friboulet: Multi-modality image simulation with the Virtual Imaging Platform: Illustration on cardiac echography and MRI. ISBI 2012: 98-101

Razvan Stoica, Jérôme Pousin, Christopher Casta, Pierre Croisille, Yue-Min Zhu, Patrick Clarysse: Integrating Fiber Orientation Constraint into a Spatio-temporal FEM Model for Heart Borders and Motion Tracking in Dynamic MRI. STACOM 2012: 355-363

Patrick Clarysse, Martine Picq, Jérôme Pousin: Optimal extended optical flow and statistical constraints: A result of convergence. J. Computational Applied Mathematics 235(7): 1840-1848 (2011)

Germain Forestier, Adrien Marion, Hugues Benoit-Cattin, Patrick Clarysse, Denis Friboulet, Tristan Glatard, Patrick Hugonnard, Carole Lartizien, Hervé Liebgott, Joachim Tabary, Bernard Gibaud: Sharing object models for multi-modality medical image simulation: A semantic approach. CBMS 2011: 1-6

Adrien Marion, Germain Forestier, Hugues Benoit-Cattin, Sorina Camarasu-Pop, Patrick Clarysse, Rafael Ferreira da Silva, Bernard Gibaud, Tristan Glatard, Patrick Hugonnard, Carole Lartizien, Hervé Liebgott, Svenja Specovius, Joachim Tabary, Sébastien Valette, Denis Friboulet: Multi-modality medical image simulation of biological models with the Virtual Imaging Platform (VIP). CBMS 2011: 1-6

Christopher Casta, Patrick Clarysse, Jérôme Pousin, Joël Schaerer, Pierre Croisille, Yue-Min Zhu: Driving Dynamic Cardiac Model Adaptation with MR-Tagging Displacement Information. FIMH 2011: 137-144

Herve Lombaert, Jean-Marc Peyrat, Pierre Croisille, Stanislas Rapacchi, Laurent Fanton, Patrick Clarysse, Herve Delingette, Nicholas Ayache: Statistical Analysis of the Human Cardiac Fiber Architecture from DT-MRI. FIMH 2011: 171-179

Sarra Ben Fredj, Tristan Glatard, Christopher Casta, Patrick Clarysse: An exploration framework for segmentation parameter spaces. ICIP 2011: 2257-2260

Herve Lombaert, Jean-Marc Peyrat, Laurent Fanton, Farida Cheriet, Hervé Delingette, Nicholas Ayache, Patrick Clarysse, Isabelle E. Magnin, Pierre Croisille: Variability of the Human Cardiac Laminar Structure. STACOM 2011: 160-167

Herve Lombaert, Jean-Marc Peyrat, Laurent Fanton, Farida Cheriet, Hervé Delingette, Nicholas Ayache, Patrick Clarysse, Isabelle E. Magnin, Pierre Croisille: Statistical Atlas of Human Cardiac Fibers: Comparison with Abnormal Hearts. STACOM 2011: 207-213

Patrick Clarysse, Bertrand Delhay, Martine Picq, Jérôme Pousin: Optimal extended optical flow subject to a statistical constraint. J. Computational Applied Mathematics 234(4): 1291-1302 (2010)

Joël Schaerer, Christopher Casta, Jérôme Pousin, Patrick Clarysse: A dynamic elastic model for segmentation and tracking of the heart in MR image sequences. Medical Image Analysis 14(6): 738-749 (2010)

Theo Arts, Frits W. Prinzen, Tammo Delhaas, Julien Milles, Alessandro C. Rossi, Patrick Clarysse: Mapping Displacement and Deformation of the Heart With Local Sine-Wave Modeling. IEEE Trans. Med. Imaging 29(5): 1114-1123 (2010)

Christopher Casta, Patrick Clarysse, Jérôme Pousin, Joël Schaerer, Pierre Croisille, Yue-Min Zhu: Incorporating Low-Level Constraints for the Retrieval of Personalised Heart Models from Dynamic MRI. STACOM/CESC 2010: 174-183

Jef Vandemeulebroucke, Jan Kybic, Patrick Clarysse, David Sarrut: Respiratory Motion Estimation from Cone-Beam Projections Using a Prior Model. MICCAI (1) 2009: 365-372

Mohamed Berkane, Patrick Clarysse, Isabelle E. Magnin: A Neural Network-Based Approach to Motion Estimation with Discontinuities. HIS 2008: 356-361

Mohamed Berkane, Patrick Clarysse, Isabelle E. Magnin: Spatio-temporal Summarizing Method of Periodic Image Sequences with Kohonen Maps. ICANN (1) 2008: 818-826

Carole Frindel, Joël Schaerer, Pierre Gueth, Patrick Clarysse, Yue-Min Zhu, Marc C. Robini: A global approach to cardiac tractography. ISBI 2008: 883-886

Joël Schaerer, Jérôme Pousin, Patrick Clarysse: A new singular perturbation approach for image segmentation tracking. ISBI 2008: 1445-1448

David Sarrut, S. Delhay, Pierre-Frédéric Villard, Vlad Boldea, Michael Beuve, Patrick Clarysse: A Comparison Framework for Breathing Motion Estimation Methods From 4-D Imaging. IEEE Trans. Med. Imaging 26(12): 1636-1648 (2007)

Bertrand Delhay, Patrick Clarysse, Isabelle E. Magnin: Locally Adapted Spatio-temporal Deformation Model for Dense Motion Estimation in Periodic Cardiac Image Sequences. FIMH 2007: 393-402

Youssef Rouchdy, Jérôme Pousin, Joël Schaerer, Patrick Clarysse: A Hyperelastic Deformable Template for Cardiac Segmentation in MRI. FIMH 2007: 443-452

Arnaud Gelas, Joël Schaerer, Olivier Bernard, Denis Friboulet, Patrick Clarysse, Isabelle E. Magnin, Rémy Prost: Radial Basis Functions Collocation Methods for Model Based Level-Set Segmentation. ICIP (2) 2007: 237-240

Johan Montagnat, Patrick Clarysse, Jukka Nenonen, Toivo Katila, Isabelle E. Magnin: Editorial. Medical Image Analysis 9(4): 352 (2005)

Jianhua Luo, Yuemin Zhu, Patrick Clarysse, Isabelle E. Magnin: Correction of Bias Field in MR Images Using Singularity Function Analysis. IEEE Trans. Med. Imaging 24(8): 1067-1085 (2005)

Cécile Germain, Vincent Breton, Patrick Clarysse, Yann Gaudeau, Tristan Glatard, Emmanuel Jeannot, Yannick Legré, Charles Loomis, Johan Montagnat, Jean-Marie Moureaux, Angel Osorio, Xavier Pennec, Romain Texier: Grid-enabling medical image analysis. CCGRID 2005: 487-495

Rana Haddad, Patrick Clarysse, Maciej Orkisz, Pierre Croisille, Didier Revel, Isabelle E. Magnin: A Realistic Anthropomorphic Numerical Model of the Beating Heart. FIMH 2005: 384-393

Bertrand Delhay, Patrick Clarysse, Jyrki Lötjönen, Toivo Katila, Isabelle E. Magnin: Evaluation of Two Free Form Deformation Based Motion Estimators in Cardiac and Chest Imaging. FIMH 2005: 467-476

Bertrand Delhay, Patrick Clarysse, Stéphane Bonnet, Pierre Grangeat, Isabelle E. Magnin: Combined 3d object motion estimation in medical sequences. ICIP 2004: 1461-1464

Julien Milles, Anneke van Susteren, Theo Arts, Patrick Clarysse, Pierre Croisille, Isabelle E. Magnin: Automatic 2D Segmentation of the Left Ventricle in Tagged Cardiac MRI Using Motion Information. ISBI 2004: 153-156

Mika Pollari, Timo Mäkelä, Jyrki Lötjönen, Nicoleta Pauna, Patrick Clarysse, Anthonin Reilhac: Evaluation of Cardiac PET-MRI Registration Methods Using a Numerical Breathing Phantom. ISBI 2004: 1447-1450

Timo Mäkelä, Quoc-Cuong Pham, Patrick Clarysse, Jukka Nenonen, Jyrki Lötjönen, Outi Sipilä, Helena Hänninen, Kirsi Lauerma, Juhani Knuuti, Toivo Katila, Isabelle E. Magnin: A 3-D model-based registration approach for the PET, MR and MCG cardiac data fusion. Medical Image Analysis 7(3): 377-389 (2003)

Nicoleta Pauna, Pierre Croisille, Nicolas Costes, Anthonin Reilhac, Timo Mäkelä, Onuc Cozar, Marc Janier, Patrick Clarysse: A Strategy to Quantitatively Evaluate MRI/PET Cardiac Rigid Registration Methods Using a Monte Carlo Simulator. FIMH 2003: 194-204

Timo Mäkelä, Mika Pollari, Jyrki Lötjönen, Nicoleta Pauna, Anthonin Reilhac, Patrick Clarysse, Isabelle E. Magnin, Toivo Katila: Evaluation and Comparison of Surface and Intensity Based Rigid Registration Methods for Thorax and Cardiac MR and PET Images. FIMH 2003: 224-233

Isabelle E. Magnin, Johan Montagnat, Patrick Clarysse, Jukka Nenonen, Toivo Katila (Eds.): Functional Imaging and Modeling of the Heart, Second International Workshop, FIMH 2003, Lyon, France, June 5-6, 2003 Proceedings. Lecture Notes in Computer Science 2674, Springer 2003, isbn 3-540-40262-4

Patrick Clarysse, Meimei Han, Pierre Croisille, Isabelle E. Magnin: Exploratory analysis of the spatio-temporal deformation of the myocardium during systole from tagged MRI. IEEE Trans. Biomed. Engineering 49(11): 1328-1339 (2002)

Timo Mäkelä, Patrick Clarysse, Outi Sipilä, Nicoleta Pauna, Quoc-Cuong Pham, Toivo Katila, Isabelle E. Magnin: A Review of Cardiac Image Registration Methods. IEEE Trans. Med. Imaging 21(9): 1011-1021 (2002)

Patrick Clarysse, Pierre Croisille, Luc Bracoud, Isabelle E. Magnin: Integrated Quantitative Analysis of Tagged Magnetic Resonance Images. FIMH 2001: 69-75

Timo Mäkelä, Quoc-Cuong Pham, Patrick Clarysse, Jyrki Lötjönen, Kirsi Lauerma, Helena Hänninen, Juhani Knuuti, Toivo Katila, Isabelle E. Magnin: A 3-D Model-Based Approach for the PET-Functional and MR-Anatomical Cardiac Imaging Data Fusion. FIMH 2001: 83-90

Timo Mäkelä, Patrick Clarysse, Jyrki Lötjönen, Outi Sipilä, Kirsi Lauerma, Helena Hänninen, Esa-Pekka Pyökkimies, Jukka Nenonen, Juhani Knuuti, Toivo Katila, Isabelle E. Magnin: A New Method for the Registration of Cardiac PET and MR Images Using Deformable Model Based Segmentation of the Main Thorax Structures. MICCAI 2001: 557-564

Toivo Katila, Isabelle E. Magnin, Patrick Clarysse, Johan Montagnat, Jukka Nenonen (Eds.): Functional Imaging and Modeling of the Heart, First International Workshop, Helsinki, Finland, November 15-16, 2001, Proceedings. Lecture Notes in Computer Science 2230, Springer 2001, isbn 3-540-42861-5

Patrick Clarysse, C. Basset, L. Khouas, Pierre Croisille, Denis Friboulet, C. Odet, Isabelle E. Magnin: Two-dimensional spatial and temporal displacement and deformation field fitting from cardiac magnetic resonance tagging. Medical Image Analysis 4(3): 253-268 (2000)

Fabrice Vincent, Patrick Clarysse, Pierre Croisille, Isabelle E. Magnin: An Elasticity-Based Region Model and its Application to the Estimation of the Heart Deformation in Tagged MRI. ICIP 2000: 629-632

Hugues Benoit-Cattin, Anne C. Planat, Pascal Joachimsmann, Atilla Baskurt, Patrick Clarysse, Isabelle E. Magnin: On the Coding of Active Quadtree Mesh. ICIP (2) 1998: 895-898

Patrick Clarysse, Denis Friboulet, Isabelle E. Magnin: Tracking Geometrical Descriptors on 3D Deformable Surfaces. Applicaton to the Left-Ventricular Surface of the Heart. IEEE Trans. Med. Imaging 16(4): 392-404 (1997)

Patrick Clarysse, Fabrice Poupon, B. Barbier, Isabelle E. Magnin: 3D boundary extraction of the left ventricle by a deformable model with a priori information. ICIP 1995: 492-495