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James R. Cole
2010 – today
- 2010
[c3]Stuart King, Yanni Sun, James R. Cole, Sakti Pramanik: BLAST Tree: Fast Filtering for Genomic Sequence Classification. BIBE 2010: 58-65
2000 – 2009
- 2009
- [j11]James R. Cole, Q. Wang, E. Cardenas, J. Fish, B. Chai, Ryan J. Farris, A. S. Kulam-Syed-Mohideen, D. M. McGarrell, Terry L. Marsh, George M. Garrity, James M. Tiedje: The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Research 37(Database-Issue): 141-145 (2009)
- 2007
- [j10]James R. Cole, B. Chai, Ryan J. Farris, Q. Wang, A. S. Kulam-Syed-Mohideen, D. M. McGarrell, A. M. Bandela, E. Cardenas, George M. Garrity, James M. Tiedje: The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Research 35(Database-Issue): 169-172 (2007)
- 2006
- [j9]Timothy G. Lilburn, Scott H. Harrison, James R. Cole, George M. Garrity: Computational aspects of systematic biology. Briefings in Bioinformatics 7(2): 186-195 (2006)
- [c2]Qiang Xue, James R. Cole, Sakti Pramanik: Sequence Homology Search Based on Database Indexing Using the Profile Hidden Markov Model. BIBE 2006: 135-140
- 2005
- [j8]James R. Cole, B. Chai, Ryan J. Farris, Q. Wang, S. A. Kulam, D. M. McGarrell, George M. Garrity, James M. Tiedje: The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Research 33(Database-Issue): 294-296 (2005)
- 2003
- [j7]John W. Urbance, James R. Cole, Paul Saxman, James M. Tiedje: BSD: the Biodegradative Strain Database. Nucleic Acids Research 31(1): 152-155 (2003)
- [j6]James R. Cole, B. Chai, Terry L. Marsh, Ryan J. Farris, Q. Wang, S. A. Kulam, S. Chandra, D. M. McGarrell, Thomas M. Schmidt, George M. Garrity, James M. Tiedje: The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Research 31(1): 442-443 (2003)
- 2001
- [j5]Bonnie L. Maidak, James R. Cole, Timothy G. Lilburn, Charles T. Parker Jr., Paul Saxman, Ryan J. Farris, George M. Garrity, Gary J. Olsen, Thomas M. Schmidt, James M. Tiedje: The RDP-II (Ribosomal Database Project). Nucleic Acids Research 29(1): 173-174 (2001)
- [j4]Joel A. Klappenbach, Paul Saxman, James R. Cole, Thomas M. Schmidt: rrndb: the Ribosomal RNA Operon Copy Number Database. Nucleic Acids Research 29(1): 181-184 (2001)
- 2000
- [j3]Bonnie L. Maidak, James R. Cole, Timothy G. Lilburn, Charles T. Parker Jr., Paul Saxman, Jason M. Stredwick, George M. Garrity, Bing Li, Gary J. Olsen, Sakti Pramanik, Thomas M. Schmidt, James M. Tiedje: The RDP (Ribosomal Database Project) continues. Nucleic Acids Research 28(1): 173-174 (2000)
1990 – 1999
- 1999
- [j2]Bonnie L. Maidak, James R. Cole, Charles T. Parker Jr., George M. Garrity, Niels Larsen, Bing Li, Timothy G. Lilburn, Michael J. McCaughey, Gary J. Olsen, Ross A. Overbeek, Sakti Pramanik, Thomas M. Schmidt, James M. Tiedje, Carl R. Woese: A new version of the RDP (Ribosomal Database Project). Nucleic Acids Research 27(1): 171-173 (1999)
- 1996
- [j1]Jin Kim, James R. Cole, Sakti Pramanik: Alignment of possible secondary structures in multiple RNA sequences using simulated annealing. Computer Applications in the Biosciences 12(4): 259-267 (1996)
- [c1]Jin Kim, James R. Cole, Eric Torng, Sakti Pramanik: Inferring Relatedness of a Macromolecule to a Sequence Database Without Sequencing. ISMB 1996: 125-133
Coauthor Index
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last updated on 2013-04-06 19:40 CEST by the dblp team