Arthur L. Delcher

Michael C. Schatz, Adam M. Phillippy, Daniel D. Sommer, Arthur L. Delcher, Daniela Puiu, Giuseppe Narzisi, Steven L. Salzberg, Mihai Pop: Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies. Briefings in Bioinformatics 14(2): 213-224 (2013)

Jason R. Miller, Arthur L. Delcher, Sergey Koren, Eli Venter, Brian Walenz, Anushka Brownley, Justin Johnson, Kelvin Li, Clark M. Mobarry, Granger G. Sutton: Aggressive assembly of pyrosequencing reads with mates. Bioinformatics 24(24): 2818-2824 (2008)

Arthur L. Delcher, Kirsten A. Bratke, Edwin C. Powers, Steven Salzberg: Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23(6): 673-679 (2007)

Michael C. Schatz, Cole Trapnell, Arthur L. Delcher, Amitabh Varshney: High-throughput sequence alignment using Graphics Processing Units. BMC Bioinformatics 8 (2007)

Daniel D. Sommer, Arthur L. Delcher, Steven L. Salzberg, Mihai Pop: Minimus: a fast, lightweight genome assembler. BMC Bioinformatics 8 (2007)

William H. Majoros, Mihaela Pertea, Arthur L. Delcher, Steven Salzberg: Efficient decoding algorithms for generalized hidden Markov model gene finders. BMC Bioinformatics 6: 16 (2005)

Mihai Pop, Adam M. Phillippy, Arthur L. Delcher, Steven Salzberg: Comparative genome assembly. Briefings in Bioinformatics 5(3): 237-248 (2004)

Brian J. Haas, Arthur L. Delcher, Jennifer R. Wortman, Steven Salzberg: DAGchainer: a tool for mining segmental genome duplications and synteny. Bioinformatics 20(18): 3643-3646 (2004)

Michael Roberts, Brian R. Hunt, James A. Yorke, Randall A. Bolanos, Arthur L. Delcher: A Preprocessor for Shotgun Assembly of Large Genomes. Journal of Computational Biology 11(4): 734-752 (2004)

Scott J. Emrich, Mary Lowe, Arthur L. Delcher: PROBEmer: a web-based software tool for selecting optimal DNA oligos. Nucleic Acids Research 31(13): 3746-3750 (2003)

Daniel H. Huson, Knut Reinert, Saul A. Kravitz, Karin A. Remington, Arthur L. Delcher, Ian M. Dew, Michael Flanigan, Aaron L. Halpern, Zhongwu Lai, Clark M. Mobarry, Granger G. Sutton, Eugene W. Myers: Design of a compartmentalized shotgun assembler for the human genome. ISMB (Supplement of Bioinformatics) 2001: 132-139

Deyou Cai, Arthur L. Delcher, Ben Kao, Simon Kasif: Modeling splice sites with Bayes networks. Bioinformatics 16(2): 152-158 (2000)

Steven Salzberg, Arthur L. Delcher, Kenneth H. Fasman, John Henderson: A Decision Tree System for Finding Genes in DNA. Journal of Computational Biology 5(4): 667-680 (1998)

Arthur L. Delcher, Adam J. Grove, Simon Kasif, Judea Pearl: Logarithmic-Time Updates and Queries in Probabilistic Networks. J. Artif. Intell. Res. (JAIR) 4: 37-59 (1996)

S. Rao Kosaraju, Arthur L. Delcher: Large-Scale Assembly of DNA Strings and Space-Efficient Construction of Suffix Trees (Correction). STOC 1996: 659

Arthur L. Delcher, Adam J. Grove, Simon Kasif, Judea Pearl: Logarithmic-Time Updates and Queries in Probabilistic Networks. CoRR cs.AI/9602102 (1996)

Arthur L. Delcher, Simon Kasif: Term Matching on a Mesh-Connected Array of Processors. Ann. Math. Artif. Intell. 14(2-4): 177-186 (1995)

Steven Salzberg, Arthur L. Delcher, David G. Heath, Simon Kasif: Best-Case Results for Nearest-Neighbor Learning. IEEE Trans. Pattern Anal. Mach. Intell. 17(6): 599-608 (1995)

Arthur L. Delcher, S. Rao Kosaraju: An NC Algorithm for Evaluating Monotone Planar Circuits. SIAM J. Comput. 24(2): 369-375 (1995)

S. Rao Kosaraju, Arthur L. Delcher: Large-scale assembly of DNA strings and space-efficient construction of suffix trees. STOC 1995: 169-177

Arthur L. Delcher, Adam J. Grove, Simon Kasif, Judea Pearl: Logarithmic-Time Updates and Queries in Probabilistic Networks. UAI 1995: 116-124

Simon Kasif, Arthur L. Delcher: Local Consistency in Parallel Constraint Satisfaction Networks. Artif. Intell. 69(1-2): 307-327 (1994)

Simon Kasif, Saibal Banerjee, Arthur L. Delcher, Gregory F. Sullivan: Some Results on the Computational Complexity of Symmetric Connectionist Networks. Ann. Math. Artif. Intell. 9(3-4): 327-344 (1993)

Arthur L. Delcher, Simon Kasif, Harry R. Goldberg, William H. Hsu: Probabilistic Prediction of Protein Secondary Structure Using Causal Networks (Extended Abstract). AAAI 1993: 316-321

Arthur L. Delcher, Simon Kasif, Harry R. Goldberg, William H. Hsu: Protein Secondary-Structure Modeling with Probabilistic Networks. ISMB 1993: 109-117

Simon Kasif, Arthur L. Delcher: Local Consistency in Parallel Constraint-Satisfaction Networks. PPCP 1993: 139-145

Arthur L. Delcher, Simon Kasif: Efficient Parallel Term Matching and Anti-Unification. J. Autom. Reasoning 9(3): 391-406 (1992)

Arthur L. Delcher, Simon Kasif: Improved Decision-Making in Game Trees: Recovering from Pathology. AAAI 1992: 513-518

Steven Salzberg, Arthur L. Delcher, David G. Heath, Simon Kasif: Learning with a Helpful Teacher. IJCAI 1991: 705-711

S. Rao Kosaraju, Arthur L. Delcher: A Tree-Partitioning Technique with Applications to Expression Evaluation and Term Matching (Extended Abstract). FOCS 1990: 163-172

Arthur L. Delcher, Simon Kasif: Efficient Parallel Term Matching and Anti-Unification. ICLP 1990: 355-369

Arthur L. Delcher, Simon Kasif: Some Results on the Complexity of Exploiting Data Dependency in Parallel Logic Programs. J. Log. Program. 6(3): 229-241 (1989)

S. Rao Kosaraju, Arthur L. Delcher: Optimal Parallel Evaluation of Tree-Structured Computations by Raking. AWOC 1988: 101-110