Minghua Deng

Kai Song, Jie Ren, Zhiyuan Zhai, Xuemei Liu, Minghua Deng, Fengzhu Sun: Alignment-Free Sequence Comparison Based on Next-Generation Sequencing Reads. Journal of Computational Biology 20(2): 64-79 (2013)

Minghua Deng, Rui Jiang, Fengzhu Sun, Xuegong Zhang (Eds.): Research in Computational Molecular Biology - 17th Annual International Conference, RECOMB 2013, Beijing, China, April 7-10, 2013. Proceedings. Lecture Notes in Computer Science 7821, Springer 2013, isbn 978-3-642-37194-3

Kai Song, Jie Ren, Zhiyuan Zhai, Xuemei Liu, Minghua Deng, Fengzhu Sun: Alignment-Free Sequence Comparison Based on Next Generation Sequencing Reads: Extended Abstract. RECOMB 2012: 272-285

Lin Hou, Lin Wang, Minping Qian, Dong Li, Chao Tang, Yunping Zhu, Minghua Deng, Fangting Li: Modular analysis of the probabilistic genetic interaction network. Bioinformatics 27(6): 853-859 (2011)

Yiming Lu, Yang Zhou, Wubin Qu, Minghua Deng, Chenggang Zhang: A Lasso regression model for the construction of microRNA-target regulatory networks. Bioinformatics 27(17): 2406-2413 (2011)

Hyonho Chun, Jia Kang, Xianghua Zhang, Minghua Deng, Haisu Ma, Hongyu Zhao: Reverse Engineering of Gene Regulation Networks with an Application to the DREAM4 in silico Network Challenge. Handbook of Statistical Bioinformatics 2011: 461-477

Quan Wang, Lin Wan, Dayong Li, Lihuang Zhu, Minping Qian, Minghua Deng: Searching for bidirectional promoters in Arabidopsis thaliana. BMC Bioinformatics 10(S-1) (2009)

Hao Zheng, Xingyi Hang, Ji Zhu, Minping Qian, Wubin Qu, Chenggang Zhang, Minghua Deng: REMAS: a new regression model to identify alternative splicing events from exon array data. BMC Bioinformatics 10(S-1) (2009)

Fugui Wang, Lin Hou, Jiangfeng Xu, Minping Qian, Minghua Deng: A Robust Empirical Bayesian Method for Detecting Differentially Expressed Genes. BMEI 2009: 1-5

Wei Wei, Lin Wan, Minping Qian, Minghua Deng: The Implementation and Application of the Microarray Preprocessing Generalized PDNN Model. BMEI 2009: 1-5

Hao Zheng, Fugui Wang, Jiangfeng Xu, Nengfeng Zhou, Minping Qian, Ji Zhu, Minghua Deng: Pathway Detection Based on Hierarchical LASSO Regression Model. BMEI 2009: 1-7

Jingwei Liu, Minghua Deng, Minping Qian: Feature-Based Causal Structure Discovery in Protein and Gene Expression Data with Bayesian Network. ICNC (2) 2009: 144-148

Lin Wan, Wenjiang J. Fu, Minghua Deng, Minping Qian: A Method to Correct Systematic Bias in Affymetrix SNP Arrays. BMEI (1) 2008: 442-446

Wenjiang J. Fu, Ming Li, Lin Wan, Minghua Deng, Minping Qian: On Design of Oligonucleotide SNP Arrays and Methods for Genotype Calling. BMEI (1) 2008: 453-458

Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen: An integrated approach to the prediction of domain-domain interactions. BMC Bioinformatics 7: 269 (2006)

Huan Yu, Minping Qian, Minghua Deng: Using a Stochastic AdaBoost Algorithm to Discover Interactome Motif Pairs from Sequences. ICIC (3) 2006: 622-630

Yuping Zhang, Huan Yu, Minghua Deng, Minping Qian: Nonequilibrium Model for Yeast Cell Cycle. ICIC (3) 2006: 786-791

Minghua Deng, Zhidong Tu, Fengzhu Sun, Ting Chen: Mapping gene ontology to proteins based on protein-protein interaction data. Bioinformatics 20(6): 895-902 (2004)

Minghua Deng, Ting Chen, Fengzhu Sun: An Integrated Probabilistic Model for Functional Prediction of Proteins. Journal of Computational Biology 11(2/3): 463-475 (2004)

Gert R. G. Lanckriet, Minghua Deng, Nello Cristianini, Michael I. Jordan, William Stafford Noble: Kernel-Based Data Fusion and Its Application to Protein Function Prediction in Yeast. Pacific Symposium on Biocomputing 2004: 300-311

Shenglan Peng, Minghua Deng, Minping Qian: An Improvement for Eulerian Path of Assembly. SNPD 2004: 97-105

Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, Fengzhu Sun: Prediction of Protein Function Using Protein-Protein Interaction Data. Journal of Computational Biology 10(6): 947-960 (2003)

Minghua Deng, Fengzhu Sun, Ting Chen: Assessment of the reliability of protein-protein interactions and protein function prediction. Pacific Symposium on Biocomputing 2003: 140-151

Minghua Deng, Ting Chen, Fengzhu Sun: An integrated probabilistic model for functional prediction of proteins. RECOMB 2003: 95-103

Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, Fengzhu Sun: Prediction of Protein Function Using Protein-Protein Interaction Data. CSB 2002: 197-206

Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen: Inferring domain-domain interactions from protein-protein interactions. RECOMB 2002: 117-126

Feng Qi, Minghua Deng, Minping Qian, Xueqing Zhu: A Novel Algorithm for Handwritten Chinese Character Recognition. ICMI 2000: 379-385