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Eleazar Eskin
2010 – today
- 2013
[j27]Nathaniel Parrish, Benjamin Sudakov, Eleazar Eskin: Genome reassembly with high-throughput sequencing data. BMC Genomics 14(S-1): S8 (2013)- [j26]Dan He, Buhm Han, Eleazar Eskin: Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data. Journal of Computational Biology 20(2): 80-92 (2013)
- [j25]Zhanyong Wang, Farhad Hormozdiari, Wen-Yun Yang, Eran Halperin, Eleazar Eskin: CNVeM: Copy Number Variation Detection Using Uncertainty of Read Mapping. Journal of Computational Biology 20(3): 224-236 (2013)
- [c41]Itamar Eskin, Farhad Hormozdiari, Lucía Conde, Jacques Riby, Chris Skibola, Eleazar Eskin, Eran Halperin: eALPS: Estimating Abundance Levels in Pooled Sequencing Using Available Genotyping Data. RECOMB 2013: 32-44
- [c40]Dan He, Zhanyong Wang, Buhm Han, Laxmi Parida, Eleazar Eskin: IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data. RECOMB 2013: 75-87
- [c39]Emrah Kostem, Eleazar Eskin: Efficiently Identifying Significant Associations in Genome-Wide Association Studies. RECOMB 2013: 118-131
- 2012
- [j24]Gregory Darnell, Dat Duong, Buhm Han, Eleazar Eskin: Incorporating prior information into association studies. Bioinformatics 28(12): 147-153 (2012)
- [c38]Dan He, Buhm Han, Eleazar Eskin: Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data. RECOMB 2012: 64-78
- [c37]Zhanyong Wang, Farhad Hormozdiari, Wen-Yun Yang, Eran Halperin, Eleazar Eskin: CNVeM: Copy Number Variation Detection Using Uncertainty of Read Mapping. RECOMB 2012: 326-340
- 2011
- [j23]Dan He, Farhad Hormozdiari, Nicholas A. Furlotte, Eleazar Eskin: Efficient algorithms for tandem copy number variation reconstruction in repeat-rich regions. Bioinformatics 27(11): 1513-1520 (2011)
- [j22]Nicholas A. Furlotte, Hyun Min Kang, Chun Ye, Eleazar Eskin: Mixed-model coexpression: calculating gene coexpression while accounting for expression heterogeneity. Bioinformatics [ISMB/ECCB] 27(13): 288-294 (2011)
- [j21]Dan He, Noah Zaitlen, Bogdan Pasaniuc, Eleazar Eskin, Eran Halperin: Genotyping common and rare variation using overlapping pool sequencing. BMC Bioinformatics 12(S-6): S2 (2011)
- [j20]Nathaniel Parrish, Farhad Hormozdiari, Eleazar Eskin: Assembly of non-unique insertion content using next-generation sequencing. BMC Bioinformatics 12(S-6): S3 (2011)
- [j19]Jae Hoon Sul, Buhm Han, Eleazar Eskin: Increasing Power of Groupwise Association Test with Likelihood Ratio Test. Journal of Computational Biology 18(11): 1611-1624 (2011)
- [c36]Dan He, Pratima Kunwar, Eleazar Eskin, Helen Horton, Peter Gilbert, Tomer Hertz: Using HLA binding prediction algorithms for epitope mapping in HIV vaccine clinical trials. BCB 2011: 594-601
- [c35]Can Alkan, Emidio Capriotti, Eleazar Eskin, Fereydoun Hormozdiari, Maricel G. Kann: Session Introduction. Pacific Symposium on Biocomputing 2011: 229-230
- [c34]Jae Hoon Sul, Buhm Han, Eleazar Eskin: Increasing Power of Groupwise Association Test with Likelihood Ratio Test. RECOMB 2011: 452-467
- 2010
- [j18]Roberto Santana, Alexander Mendiburu, Noah Zaitlen, Eleazar Eskin, José Antonio Lozano: Multi-marker tagging single nucleotide polymorphism selection using estimation of distribution algorithms. Artificial Intelligence in Medicine 50(3): 193-201 (2010)
- [j17]Dan He, Arthur Choi, Knot Pipatsrisawat, Adnan Darwiche, Eleazar Eskin: Optimal algorithms for haplotype assembly from whole-genome sequence data. Bioinformatics [ISMB] 26(12): 183-190 (2010)
- [j16]Dan He, Nicholas A. Furlotte, Eleazar Eskin: Detection and reconstruction of tandemly organized de novo copy number variations. BMC Bioinformatics 11(S-11): S12 (2010)
- [j15]Eun Yong Kang, Chun Ye, Ilya Shpitser, Eleazar Eskin: Detecting the Presence and Absence of Causal Relationships between Expression of Yeast Genes with Very Few Samples. Journal of Computational Biology 17(3): 533-546 (2010)
- [j14]Hyun Min Kang, Noah Zaitlen, Eleazar Eskin: EMINIM: An Adaptive and Memory-Efficient Algorithm for Genotype Imputation. Journal of Computational Biology 17(3): 547-560 (2010)
- [j13]Jason L. Stein, Xue Hua, Jonathan H. Morra, Suh Lee, Derrek P. Hibar, April J. Ho, Alex D. Leow, Arthur W. Toga, Jae Hoon Sul, Hyun Min Kang, Eleazar Eskin, Andrew J. Saykin, Li Shen, Tatiana Foroud, Nathan Pankratz, Matthew J. Huentelman, David W. Craig, Jill D. Gerber, April N. Allen, Jason J. Corneveaux, Dietrich A. Stephan, Jennifer Webster, Bryan M. DeChairo, Steven G. Potkin, Clifford R. Jack Jr., Michael W. Weiner, Paul M. Thompson: Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer's disease. NeuroImage 51(2): 542-554 (2010)
- [c33]Eun Yong Kang, Ilya Shpitser, Eleazar Eskin: Respecting Markov Equivalence in Computing Posterior Probabilities of Causal Graphical Features. AAAI 2010
- [c32]
2000 – 2009
- 2009
- [j12]Chun Ye, Simon J. Galbraith, James C. Liao, Eleazar Eskin: Using Network Component Analysis to Dissect Regulatory Networks Mediated by Transcription Factors in Yeast. PLoS Computational Biology 5(3) (2009)
- [c31]Eun Yong Kang, Ilya Shpitser, Chun Ye, Eleazar Eskin: Detecting the Presence and Absence of Causal Relationships between Expression of Yeast Genes with Very Few Samples. RECOMB 2009: 466-481
- [c30]Hyun Min Kang, Noah Zaitlen, Buhm Han, Eleazar Eskin: An Adaptive and Memory Efficient Algorithm for Genotype Imputation. RECOMB 2009: 482-495
- 2008
- [c29]Eleazar Eskin: Increasing Power in Association Studies by Using Linkage Disequilibrium Structure and Molecular Function as Prior Information. RECOMB 2008: 434
- [c28]Arthur Choi, Noah Zaitlen, Buhm Han, Knot Pipatsrisawat, Adnan Darwiche, Eleazar Eskin: Efficient Genome Wide Tagging by Reduction to SAT. WABI 2008: 135-147
- 2007
- [j11]Chun Ye, Eleazar Eskin: Discovering tightly regulated and differentially expressed gene sets in whole genome expression data. Bioinformatics 23(2): 84-90 (2007)
- [j10]Eleazar Eskin, Sagi Snir: Incorporating homologues into Sequence Embeddings for protein Analysis. J. Bioinformatics and Computational Biology 5(3): 717-738 (2007)
- [c27]Sean O'Rourke, Noah Zaitlen, Nebojsa Jojic, Eleazar Eskin: Reconstructing the Phylogeny of Mobile Elements. RECOMB 2007: 196-210
- [c26]Erik Corona, Benjamin J. Raphael, Eleazar Eskin: Identification of Deletion Polymorphisms from Haplotypes. RECOMB 2007: 354-365
- 2006
- [j9]Sean O'Rourke, Gal Chechik, Robin Friedman, Eleazar Eskin: Discrete profile comparison using information bottleneck. BMC Bioinformatics 7(S-1) (2006)
- [j8]Eleazar Eskin, Roded Sharan, Eran Halperin: A Note on Phasing Long Genomic Regions Using Local Haplotype Predictions. J. Bioinformatics and Computational Biology 4(3): 639-648 (2006)
- [c25]Sarah J. Aerni, Eleazar Eskin: 10 Years of the International Conference on Research in Computational Molecular Biology (RECOMB). RECOMB 2006: 546-562
- [e2]Eleazar Eskin, Trey Ideker, Benjamin J. Raphael, Christopher T. Workman (Eds.): Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers. Lecture Notes in Computer Science 4023, Springer 2006, ISBN 978-3-540-48293-2
- 2005
- [j7]Salvatore J. Stolfo, Frank Apap, Eleazar Eskin, Katherine A. Heller, Shlomo Hershkop, Andrew Honig, Krysta Marie Svore: A comparative evaluation of two algorithms for Windows Registry Anomaly Detection. Journal of Computer Security 13(4): 659-693 (2005)
- [j6]Shaojie Zhang, Brian Haas, Eleazar Eskin, Vineet Bafna: Searching Genomes for Noncoding RNA Using FastR. IEEE/ACM Trans. Comput. Biology Bioinform. 2(4): 366-379 (2005)
- [c24]Eleazar Eskin, Sagi Snir: The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space. CIBCB 2005: 179-186
- [e1]Eleazar Eskin, Christopher T. Workman (Eds.): Regulatory Genomics, RECOMB 2004 International Workshop, RRG 2004, San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers. Lecture Notes in Computer Science 3318, Springer 2005, ISBN 3-540-24456-5
- 2004
- [j5]Christina S. Leslie, Eleazar Eskin, Adiel Cohen, Jason Weston, William Stafford Noble: Mismatch string kernels for discriminative protein classification. Bioinformatics 20(4): 467-476 (2004)
- [j4]Eran Halperin, Eleazar Eskin: Haplotype reconstruction from genotype data using Imperfect Phylogeny. Bioinformatics 20(12): 1842-1849 (2004)
- [c23]Sean O'Rourke, Gal Chechik, Robin Friedman, Eleazar Eskin: Discrete profile alignment via constrained information bottleneck. NIPS 2004
- [c22]Eleazar Eskin, Eugene Agichtein: Combining Text Mining and Sequence Analysis to Discover Protein Functional Regions. Pacific Symposium on Biocomputing 2004: 288-299
- [c21]Chaya Ben-Zaken Zilberstein, Eleazar Eskin, Zohar Yakhini: Using Expression Data to Discover RNA and DNA Regulatory Sequence Motifs. Regulatory Genomics 2004: 65-78
- [c20]Eleazar Eskin: From profiles to patterns and back again: a branch and bound algorithm for finding near optimal motif profiles. RECOMB 2004: 115-124
- 2003
- [j3]Eleazar Eskin, William Stafford Noble, Yoram Singer: Protein Family Classification Using Sparse Markov Transducers. Journal of Computational Biology 10(2): 187-213 (2003)
- [c19]
- [c18]Eleazar Eskin, Uri Keich, Mikhail S. Gelfand, Pavel A. Pevzner: Genome-Wide Analysis of Bacterial Promoter Regions. Pacific Symposium on Biocomputing 2003: 29-40
- [c17]Eleazar Eskin, Eran Halperin, Richard M. Karp: Large scale reconstruction of haplotypes from genotype data. RECOMB 2003: 104-113
- 2002
- [j2]Eleazar Eskin, William Stafford Noble, Yoram Singer: Using Substitution Matrices to Estimate Probability Distributions for Biological Sequences. Journal of Computational Biology 9(6): 775-791 (2002)
- [c16]Bernhard Schölkopf, Jason Weston, Eleazar Eskin, Christina S. Leslie, William Stafford Noble: A Kernel Approach for Learning from almost Orthogonal Patterns. ECML 2002: 511-528
- [c15]Eleazar Eskin, Pavel A. Pevzner: Finding composite regulatory patterns in DNA sequences. ISMB 2002: 354-363
- [c14]Christina S. Leslie, Eleazar Eskin, Jason Weston, William Stafford Noble: Mismatch String Kernels for SVM Protein Classification. NIPS 2002: 1417-1424
- [c13]Manasi Bhattacharyya, Shlomo Hershkop, Eleazar Eskin: MET: an experimental system for Malicious Email Tracking. NSPW 2002: 3-10
- [c12]Bernhard Schölkopf, Jason Weston, Eleazar Eskin, Christina S. Leslie, William Stafford Noble: A Kernel Approach for Learning from Almost Orthogonal Patterns. PKDD 2002: 494-511
- [c11]Christina S. Leslie, Eleazar Eskin, William Stafford Noble: The Spectrum Kernel: A String Kernel for SVM Protein Classification. Pacific Symposium on Biocomputing 2002: 566-575
- [c10]Frank Apap, Andrew Honig, Shlomo Hershkop, Eleazar Eskin, Salvatore J. Stolfo: Detecting Malicious Software by Monitoring Anomalous Windows Registry Accesses. RAID 2002: 36-53
- 2001
- [j1]Salvatore J. Stolfo, Wenke Lee, Philip K. Chan, Wei Fan, Eleazar Eskin: Data Mining-based Intrusion Detectors: An Overview of the Columbia IDS Project. SIGMOD Record 30(4): 5-14 (2001)
- [c9]Eleazar Eskin, William Noble Grundy, Yoram Singer: Using mixtures of common ancestors for estimating the probabilities of discrete events in biological sequences. ISMB (Supplement of Bioinformatics) 2001: 65-73
- [c8]Matthew G. Schultz, Eleazar Eskin, Erez Zadok, Salvatore J. Stolfo: Data Mining Methods for Detection of New Malicious Executables. IEEE Symposium on Security and Privacy 2001: 38-49
- [c7]Matthew G. Schultz, Eleazar Eskin, Erez Zadok, Manasi Bhattacharyya, Salvatore J. Stolfo: MEF: Malicious Email Filter - A UNIX Mail Filter That Detects Malicious Windows Executables. USENIX Annual Technical Conference, FREENIX Track 2001: 245-252
- 2000
- [c6]
- [c5]Eugene Agichtein, Eleazar Eskin, Luis Gravano: Combining Strategies for Extracting Relations from Text Collections. ACM SIGMOD Workshop on Research Issues in Data Mining and Knowledge Discovery 2000: 86-95
- [c4]Eleazar Eskin: Anomaly Detection over Noisy Data using Learned Probability Distributions. ICML 2000: 255-262
- [c3]Eleazar Eskin, William Noble Grundy, Yoram Singer: Protein Family Classification Using Sparse Markov Transducers. ISMB 2000: 134-145
1990 – 1999
- 1999
- [c2]Kathleen McKeown, Judith Klavans, Vasileios Hatzivassiloglou, Regina Barzilay, Eleazar Eskin: Towards Multidocument Summarization by Reformulation: Progress and Prospects. AAAI/IAAI 1999: 453-460
- [c1]Eleazar Eskin, Eric V. Siegel: Genetic programming applied to Othello: introducing students to machine learning research. SIGCSE 1999: 242-246
Coauthor Index
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last updated on 2013-06-13 23:06 CEST by the dblp team