Darren R. Flower

Shahzad Mumtaz, Ian T. Nabney, Darren R. Flower: Novel visualization methods for protein data. CIBCB 2012: 198-205

Ivan Dimitrov, Panayot Garnev, Darren R. Flower, Irini A. Doytchinova: EpiTOP - a proteochemometric tool for MHC class II binding prediction. Bioinformatics 26(16): 2066-2068 (2010)

Andrew Secker, Matthew N. Davies, Alex Alves Freitas, Edward Clark, Jonathan Timmis, Darren R. Flower: Hierarchical classification of G-Protein-Coupled Receptors with data-driven selection of attributes and classifiers. IJDMB 4(2): 191-210 (2010)

Hifzur Rahman Ansari, Darren R. Flower, G. P. S. Raghava: AntigenDB: an immunoinformatics database of pathogen antigens. Nucleic Acids Research 38(Database-Issue): 847-853 (2010)

Andrew Secker, Matthew N. Davies, Alex Alves Freitas, Jonathan Timmis, Edward Clark, Darren R. Flower: An Artificial Immune System for Clustering Amino Acids in the Context of Protein Function Classification. J. Math. Model. Algorithms 8(2): 103-123 (2009)

Matthew N. Davies, Andrew Secker, Alex Alves Freitas, Edward Clark, Jonathan Timmis, Darren R. Flower: Optimizing amino acid groupings for GPCR classification. Bioinformatics 24(18): 1980-1986 (2008)

Andrew Secker, Matthew N. Davies, Alex Alves Freitas, Jonathan Timmis, Edward Clark, Darren R. Flower: An Artificial Immune System for Evolving Amino Acid Clusters Tailored to Protein Function Prediction. ICARIS 2008: 242-253

Matthew N. Davies, Andrew Secker, Alex Alves Freitas, Miguel Mendao, Jonathan Timmis, Darren R. Flower: On the hierarchical classification of G protein-coupled receptors. Bioinformatics 23(23): 3113-3118 (2007)

Irini A. Doytchinova, Darren R. Flower: VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines. BMC Bioinformatics 8 (2007)

Irini A. Doytchinova, Pingping Guan, Darren R. Flower: EpiJen: a server for multistep T cell epitope prediction. BMC Bioinformatics 7: 131 (2006)

Wen Liu, Xiangshan Meng, Qiqi Xu, Darren R. Flower, Tongbin Li: Quantitative prediction of mouse class I MHC peptide binding affinity using support vector machine regression (SVR) models. BMC Bioinformatics 7: 182 (2006)

Ji Wan, Wen Liu, Qiqi Xu, Yongliang Ren, Darren R. Flower, Tongbin Li: SVRMHC prediction server for MHC-binding peptides. BMC Bioinformatics 7: 463 (2006)

Jesper Salomon, Darren R. Flower: Predicting Class II MHC-Peptide binding: a kernel based approach using similarity scores. BMC Bioinformatics 7: 501 (2006)

Channa K. Hattotuwagama, Christopher P. Toseland, Pingping Guan, Debra J. Taylor, Shelley L. Hemsley, Irini A. Doytchinova, Darren R. Flower: Toward Prediction of Class II Mouse Major Histocompatibility Complex Peptide Binding Affinity: in Silico Bioinformatic Evaluation Using Partial Least Squares, a Robust Multivariate Statistical Technique. Journal of Chemical Information and Modeling 46(3): 1491-1502 (2006)

Christopher P. Toseland, Helen M. McSparron, Matthew N. Davies, Darren R. Flower: PPD v1.0 - an integrated, web-accessible database of experimentally determined protein pK_a values. Nucleic Acids Research 34(Database-Issue): 199-203 (2006)

Christopher P. Toseland, Helen M. McSparron, Darren R. Flower: DSD - An integrated, web-accessible database of Dehydrogenase Enzyme Stereospecificities. BMC Bioinformatics 6: 283 (2005)

Channa K. Hattotuwagama, Irini A. Doytchinova, Darren R. Flower: In Silico Prediction of Peptide Binding Affinity to Class I Mouse Major Histocompatibility Complexes: A Comparative Molecular Similarity Index Analysis (CoMSIA) Study. Journal of Chemical Information and Modeling 45(5): 1415-1423 (2005)

Irini A. Doytchinova, Darren R. Flower: Towards the in silico identification of class II restricted T-cell epitopes: a partial least squares iterative self-consistent algorithm for affinity prediction. Bioinformatics 19(17): 2263-2270 (2003)

Helen M. McSparron, Martin J. Blythe, Christianna Zygouri, Irini A. Doytchinova, Darren R. Flower: JenPep: A Novel Computational Information Resource for Immunobiology and Vaccinology. Journal of Chemical Information and Computer Sciences 43(4): 1276-1287 (2003)

Terri K. Attwood, Paul Bradley, Darren R. Flower, Anna Gaulton, Neil Maudling, Alex Mitchell, G. Moulton, A. Nordle, K. Paine, P. Taylor, A. Uddin, Christianna Zygouri: PRINTS and its automatic supplement, prePRINTS. Nucleic Acids Research 31(1): 400-402 (2003)

Pingping Guan, Irini A. Doytchinova, Christianna Zygouri, Darren R. Flower: MHCPred: a server for quantitative prediction of peptide-MHC binding. Nucleic Acids Research 31(13): 3621-3624 (2003)

Paul D. Taylor, Terri K. Attwood, Darren R. Flower: BPROMPT: a consensus server for membrane protein prediction. Nucleic Acids Research 31(13): 3698-3700 (2003)

Martin J. Blythe, Irini A. Doytchinova, Darren R. Flower: JenPep: a database of quantitative functional peptide data for immunology. Bioinformatics 18(3): 434-439 (2002)

Irini A. Doytchinova, Darren R. Flower: A Comparative Molecular Similarity Index Analysis (CoMSIA) study identifies an HLA-A2 binding supermotif. Journal of Computer-Aided Molecular Design 16(8-9): 535-544 (2002)

Christian Schönbach, Judice L. Y. Koh, Darren R. Flower, Limsoon Wong, Vladimir Brusic: FIMM, a database of functional molecular immunology: update 2002. Nucleic Acids Research 30(1): 226-229 (2002)

Terri K. Attwood, Martin J. Blythe, Darren R. Flower, Anna Gaulton, J. E. Mabey, Neil Maudling, L. McGregor, Alex Mitchell, G. Moulton, K. Paine, Philip Scordis: PRINTS and PRINTS-S shed light on protein ancestry. Nucleic Acids Research 30(1): 239-241 (2002)

Terri K. Attwood, Michael D. R. Croning, Darren R. Flower, A. P. Lewis, J. E. Mabey, Philip Scordis, J. N. Selley, W. Wright: PRINTS-S: the database formerly known as PRINTS. Nucleic Acids Research 28(1): 225-227 (2000)

Philip Scordis, Darren R. Flower, Terri K. Attwood: FingerPRINTScan: intelligent searching of the PRINTS motif database. Bioinformatics 15(10): 799-806 (1999)

Terri K. Attwood, Darren R. Flower, A. P. Lewis, J. E. Mabey, S. R. Morgan, Philip Scordis, J. N. Selley, W. Wright: PRINTS prepares for the new millennium. Nucleic Acids Research 27(1): 220-225 (1999)

Darren R. Flower: On the Properties of Bit String-Based Measures of Chemical Similarity. Journal of Chemical Information and Computer Sciences 38(3): 379-386 (1998)

Terri K. Attwood, Michael E. Beck, Darren R. Flower, Philip Scordis, J. N. Selley: The PRINTS protein fingerprint database in its fifth year. Nucleic Acids Research 26(1): 304-308 (1998)

Terri K. Attwood, H. Avison, Michael E. Beck, Maria C. Bewley, Alan J. Bleasby, F. Brewster, P. Cooper, Kirill Degtyarenko, A. J. Geddes, Darren R. Flower, M. P. Kelly, Shaun Lott, K. M. Measures, D. J. Parry-Smith, D. N. Perkins, Philip Scordis, David Scott, C. Worledge: The PRINTS Database of Protein Fingerprints: A Novel Information Resource for Computational Molecular Biology. Journal of Chemical Information and Computer Sciences 37(3): 417-424 (1997)