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Ana T. Freitas
2010 – today
- 2012
[j12]Nuno D. Mendes, Steffen Heyne, Ana T. Freitas, Marie-France Sagot, Rolf Backofen: Navigating the unexplored seascape of pre-miRNA candidates in single-genome approaches. Bioinformatics 28(23): 3034-3041 (2012)- [c9]Catia M. Machado, Francisco M. Couto, Alexandra R. Fernandes, Susana Santos, Ana T. Freitas: Toward a Translational Medicine Approach for Hypertrophic Cardiomyopathy. ITBAM 2012: 151-165
- [e1]Ana T. Freitas, Arcadi Navarro (Eds.): Bioinformatics for Personalized Medicine - 10th Spanish Symposium, JBI 2010, Torremolinos, Spain, October 27-29, 2010. Revised Selected Papers. Lecture Notes in Computer Science 6620, Springer 2012, ISBN 978-3-642-28061-0
- 2011
- [j11]Francisco Fernandes, Paulo G. S. da Fonseca, Luís M. S. Russo, Arlindo L. Oliveira, Ana T. Freitas: Efficient alignment of pyrosequencing reads for re-sequencing applications. BMC Bioinformatics 12: 163 (2011)
- [j10]Dulce Calçada, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira: Quantitative Modeling of the Saccharomyces cerevisiae Flr1 regulatory Network Using an S-System Formalism. J. Bioinformatics and Computational Biology 9(5): 613-630 (2011)
- [j9]Dário Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra Costa dos Santos, Tânia Rodrigues Cabrito, Alexandre P. Francisco, Sara C. Madeira, Ricardo Santos Aires, Arlindo L. Oliveira, Isabel Sá-Correia, Ana T. Freitas: YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface. Nucleic Acids Research 39(Database-Issue): 136-140 (2011)
- [c8]Dulce Calçada, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira: Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism. HISB 2011: 69-75
- 2010
- [j8]Catia M. Machado, Francisco M. Couto, Alexandra R. Fernandes, Susana Santos, Nuno Cardim, Ana T. Freitas: Unraveling Hypertrophic Cardiomyopathy Variability. ERCIM News 2010(82): 48-49 (2010)
2000 – 2009
- 2009
- [j7]Francisco Fernandes, Luísa Pereira, Ana T. Freitas: CSA: An efficient algorithm to improve circular DNA multiple alignment. BMC Bioinformatics 10 (2009)
- [j6]Pedro T. Monteiro, Estelle Dumas, Bruno Besson, Radu Mateescu, Michel Page, Ana T. Freitas, Hidde de Jong: A service-oriented architecture for integrating the modeling and formal verification of genetic regulatory networks. BMC Bioinformatics 10: 450 (2009)
- 2008
- [j5]Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira: An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance. BMC Bioinformatics 9 (2008)
- [j4]Pedro T. Monteiro, Nuno D. Mendes, Miguel C. Teixeira, Sofia d'Orey, Sandra Tenreiro, Nuno P. Mira, Hélio Pais, Alexandre P. Francisco, Alexandra M. Carvalho, Artur B. Lourenço, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas: YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae. Nucleic Acids Research 36(Database-Issue): 132-136 (2008)
- [c7]Pedro T. Monteiro, Delphine Ropers, Radu Mateescu, Ana T. Freitas, Hidde de Jong: Temporal Logic Patterns for Querying Qualitative Models of Genetic Regulatory Networks. ECAI 2008: 229-233
- [c6]Pedro T. Monteiro, Delphine Ropers, Radu Mateescu, Ana T. Freitas, Hidde de Jong: Temporal logic patterns for querying dynamic models of cellular interaction networks. ECCB 2008: 227-233
- [c5]Alexandre P. Francisco, Arlindo L. Oliveira, Ana T. Freitas: Identification of Transcription Factor Binding Sites in Promoter Regions by Modularity Analysis of the Motif Co-occurrence Graph. ISBRA 2008: 220-231
- 2006
- [j3]Nuno D. Mendes, Ana C. Casimiro, Pedro M. Santos, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas: MUSA: a parameter free algorithm for the identification of biologically significant motifs. Bioinformatics 22(24): 2996-3002 (2006)
- [j2]Miguel C. Teixeira, Pedro T. Monteiro, Pooja Jain, Sandra Tenreiro, Alexandra R. Fernandes, Nuno P. Mira, Marta Alenquer, Ana T. Freitas, Arlindo L. Oliveira, Isabel Sá-Correia: The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae. Nucleic Acids Research 34(Database-Issue): 446-451 (2006)
- [j1]Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot: An Efficient Algorithm for the Identification of Structured Motifs in DNA Promoter Sequences. IEEE/ACM Trans. Comput. Biology Bioinform. 3(2): 126-140 (2006)
- 2005
- [c4]Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot: A highly scalable algorithm for the extraction of CIS-regulatory regions. APBC 2005: 273-282
- 2004
- [c3]Alexandra M. Carvalho, Arlindo L. Oliveira, Ana T. Freitas, Marie-France Sagot: A parallel algorithm for the extraction of structured motifs. SAC 2004: 147-153
- [c2]Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot: Efficient Extraction of Structured Motifs Using Box-Links. SPIRE 2004: 267-268
- 2003
- [c1]Ana T. Freitas, Arlindo L. Oliveira: Implicit Resolution of the Chapman-Kolmogorov Equations for Sequential Circuits: An Application in Power Estimation. DATE 2003: 10764-10769
Coauthor Index
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last updated on 2012-12-02 20:28 CET by the dblp team