Anatoly S. Frolov

Julia V. Ponomarenko, Tatyana I. Merkulova, Galina Orlova, Oleg N. Fokin, Elena Gorshkova, Anatoly S. Frolov, Vadim P. Valuev, Mikhail P. Ponomarenko: rSNP_Guide, a database system for analysis of transcription factor binding to DNA with variations: application to genome annotation. Nucleic Acids Research 31(1): 118-121 (2003)

Julia V. Ponomarenko, Galina Orlova, Anatoly S. Frolov, Mikhail S. Gelfand, Mikhail P. Ponomarenko: SELEX_DB: a database on in vitro selected oligomers adapted for recognizing natural sites and for analyzing both SNPs and site-directed mutagenesis data. Nucleic Acids Research 30(1): 195-199 (2002)

Julia V. Ponomarenko, Dagmara P. Furman, Anatoly S. Frolov, Nikolay L. Podkolodny, Galina Orlova, Mikhail P. Ponomarenko, Nikolay A. Kolchanov, Akinori Sarai: ACTIVITY: a database on DNA/RNA sites activity adapted to apply sequence-activity relationships from one system to another. Nucleic Acids Research 29(1): 284-287 (2001)

Julia V. Ponomarenko, Tatyana I. Merkulova, Gennady V. Vasiliev, Zoya B. Levashova, Galina Orlova, Sergey V. Lavryushev, Oleg N. Fokin, Mikhail P. Ponomarenko, Anatoly S. Frolov, Akinori Sarai: rSNP_Guide, a database system for analysis of transcription factor binding to target sequences: application to SNPs and site-directed mutations. Nucleic Acids Research 29(1): 312-316 (2001)

Alexander G. Bachinsky, Anatoly S. Frolov, Andrey N. Naumochkin, Lily Ph. Nizolenko, Andrey A. Yarigin: PROF_ PAT 1.3: Updated database of patterns used to detect local similarities. Bioinformatics 16(4): 358-366 (2000)

Julia V. Ponomarenko, Galina Orlova, Mikhail P. Ponomarenko, Sergey V. Lavryushev, Anatoly S. Frolov, Svetlana V. Zybova, Nikolay A. Kolchanov: SELEX_DB: an activated database on selected randomized DNA/RNA sequences addressed to genomic sequence annotation. Nucleic Acids Research 28(1): 205-208 (2000)

Victor G. Levitsky, Mikhail P. Ponomarenko, Julia V. Ponomarenko, Anatoly S. Frolov, Nikolay A. Kolchanov: Nucleosomal DNA property database. Bioinformatics 15(7): 582-592 (1999)

Mikhail P. Ponomarenko, Julia V. Ponomarenko, Anatoly S. Frolov, Olga A. Podkolodnaya, Denis G. Vorobiev, Nikolay A. Kolchanov, G. Christian Overton: Oligonucleotide frequency matrices addressed to recognizing functional DNA sites. Bioinformatics 15(7): 631-643 (1999)

Vladimir N. Babenko, P. S. Kosarev, Oleg V. Vishnevsky, Victor G. Levitsky, V. V. Basin, Anatoly S. Frolov: Investigating extended regulatory regions of genomic DNA sequences. Bioinformatics 15(7): 644-653 (1999)

Julia V. Ponomarenko, Mikhail P. Ponomarenko, Anatoly S. Frolov, Denis G. Vorobiev, G. Christian Overton, Nikolay A. Kolchanov: Conformational and physicochemical DNA features specific for transcription factor binding sites. Bioinformatics 15(7): 654-668 (1999)

Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Anatoly S. Frolov, Elena A. Ananko, F. A. Kolpakov, Elena V. Ignatieva, Olga A. Podkolodnaya, T. N. Goryachkovskaya, Irina L. Stepanenko, Tatyana I. Merkulova, V. V. Babenko, Y. V. Ponomarenko, Alexey V. Kochetov, Nikolay L. Podkolodny, Denis G. Vorobiev, Sergey V. Lavryushev, Dmitry A. Grigorovich, Y. V. Kondrakhin, Luciano Milanesi, Edgar Wingender, Victor V. Solovyev, G. Christian Overton: Integrated databases and computer systems for studying eukaryotic gene expression. Bioinformatics 15(7): 669-686 (1999)

Mikhail P. Ponomarenko, Julia V. Ponomarenko, Anatoly S. Frolov, Nikolay L. Podkolodny, Ludmila K. Savinkova, Nikolay A. Kolchanov, G. Christian Overton: Identification of sequence-dependent DNA features correlating to activity of DNA sites interacting with proteins. Bioinformatics 15(7): 687-703 (1999)

Alexey V. Kochetov, Mikhail P. Ponomarenko, Anatoly S. Frolov, L. L. Kisselev, Nikolay A. Kolchanov: Prediction of eukaryotic mRNA translational properties. Bioinformatics 15(7): 704-712 (1999)

Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Alexander E. Kel, Y. V. Kondrakhin, Anatoly S. Frolov, F. A. Kolpakov, T. N. Goryachkovskaya, O. V. Kel, Elena A. Ananko, Elena V. Ignatieva, Olga A. Podkolodnaya, Vladimir N. Babenko, Irina L. Stepanenko, Aida G. Romashchenko, Tatyana I. Merkulova, Denis G. Vorobiev, Sergey V. Lavryushev, Y. V. Ponomarenko, Alexey V. Kochetov, G. B. Kolesov, Victor V. Solovyev, Luciano Milanesi, Nikolay L. Podkolodny, Edgar Wingender, T. Heinemeyer: GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome. ISMB 1998: 95-104

Anatoly S. Frolov, I. S. Pika, A. M. Eroshkin: ProMSED: protein multiple sequence editor for Windows 3.11/95. Computer Applications in the Biosciences 13(3): 243-248 (1997)