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André Fujita
2010 – today
- 2013
[j18]Masao Nagasaki, André Fujita, Yayoi Sekiya, Ayumu Saito, Emi Ikeda, Chen Li, Satoru Miyano: XiP: a computational environment to create, extend and share workflows. Bioinformatics 29(1): 137-139 (2013)- 2012
- [j17]Kaname Kojima, Seiya Imoto, Rui Yamaguchi, André Fujita, Mai Yamauchi, Noriko Gotoh, Satoru Miyano: Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing. BMC Genomics 13(S-1): S6 (2012)
- [i1]Daniel Yasumasa Takahashi, João Ricardo Sato, Carlos Eduardo Ferreira, André Fujita: Discriminating different classes of biological networks by analyzing the graphs spectra distribution. CoRR abs/1208.2976 (2012)
- 2011
- [j16]Masao Nagasaki, Ayumu Saito, André Fujita, Georg Tremmel, Kazuko Ueno, Emi Ikeda, Euna Jeong, Satoru Miyano: Systems biology model repository for macrophage pathway simulation. Bioinformatics 27(11): 1591-1593 (2011)
- [j15]André Fujita, João Ricardo Sato, Marcos Angelo Almeida Demasi, Rui Yamaguchi, Teppei Shimamura, Carlos Eduardo Ferreira, Mari Cleide Sogayar, Satoru Miyano: Inferring Contagion in Regulatory Networks. IEEE/ACM Trans. Comput. Biology Bioinform. 8(2): 570-576 (2011)
- 2010
- [j14]André Fujita, Kaname Kojima, Alexandre G. Patriota, João Ricardo Sato, Patricia Severino, Satoru Miyano: A fast and robust statistical test based on likelihood ratio with Bartlett correction to identify Granger causality between gene sets. Bioinformatics 26(18): 2349-2351 (2010)
- [j13]Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, André Fujita, Teppei Shimamura, Satoru Miyano: Model-free unsupervised gene set screening based on information enrichment in expression profiles. Bioinformatics 26(24): 3090-3097 (2010)
- [j12]André Fujita, João Ricardo Sato, Kaname Kojima, Luciana Rodrigues Gomes, Masao Nagasaki, Mari Cleide Sogayar, Satoru Miyano: Identification of Granger Causality between Gene Sets. J. Bioinformatics and Computational Biology 8(4): 679-701 (2010)
- [j11]João Ricardo Sato, André Fujita, Elisson F. Cardoso, Carlos E. Thomaz, Michael J. Brammer, Edson Amaro Jr.: Analyzing the connectivity between regions of interest: An approach based on cluster Granger causality for fMRI data analysis. NeuroImage 52(4): 1444-1455 (2010)
- [c1]André Fujita, Patricia Severino, João Ricardo Sato, Satoru Miyano: Granger Causality in Systems Biology: Modeling Gene Networks in Time Series Microarray Data Using Vector Autoregressive Models. BSB 2010: 13-24
2000 – 2009
- 2009
- [j10]André Fujita, Alexandre G. Patriota, João Ricardo Sato, Satoru Miyano: The impact of measurement errors in the identification of regulatory networks. BMC Bioinformatics 10: 412 (2009)
- [j9]André Fujita, João Ricardo Sato, Marcos Angelo Almeida Demasi, Mari Cleide Sogayar, Carlos Eduardo Ferreira, Satoru Miyano: Comparing Pearson, Spearman and Hoeffding's d Measure for Gene Expression Association Analysis. J. Bioinformatics and Computational Biology 7(4): 663-684 (2009)
- [j8]João Ricardo Sato, André Fujita, Carlos Eduardo Thomaz, Maria da Graça Morais Martin, Janaina Mourão Miranda, Michael John Brammer, Edson Amaro Júnior: Evaluating SVM and MLDA in the extraction of discriminant regions for mental state prediction. NeuroImage 46(1): 105-114 (2009)
- [j7]João Ricardo Sato, André Fujita, Carlos Eduardo Thomaz, Maria da Graça Morais Martin, Janaina Mourão Miranda, Michael John Brammer, Edson Amaro Jr.: Corrigendum to "Evaluating SVM and MLDA in the extraction of discriminant regions for mental state prediction": [NeuroImage 46 (2009) 105-114]. NeuroImage 47(1): 423-425 (2009)
- 2008
- [j6]André Fujita, João Ricardo Sato, Humberto Miguel Garay-Malpartida, Mari Cleide Sogayar, Carlos Eduardo Ferreira, Satoru Miyano: Modeling Nonlinear Gene Regulatory Networks from Time Series Gene Expression Data. J. Bioinformatics and Computational Biology 6(5): 961-979 (2008)
- [j5]João Ricardo Sato, Carlos Eduardo Thomaz, Ellison Fernando Cardoso, André Fujita, Maria da Graça Morais Martin, Edson Amaro Jr.: Hyperplane navigation: A method to set individual scores in fMRI group datasets. NeuroImage 42(4): 1473-1480 (2008)
- 2007
- [j4]João Ricardo Sato, André Fujita, Edson Amaro Jr., Janaina Mourão Miranda, Pedro Alberto Morettin, Michael John Brammer: DWT-CEM: an algorithm for scale-temporal clustering in fMRI. Biological Cybernetics 97(1): 33-45 (2007)
- [j3]André Fujita, João Ricardo Sato, Humberto Miguel Garay-Malpartida, Pedro Alberto Morettin, Mari Cleide Sogayar, Carlos Eduardo Ferreira: Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method. Bioinformatics 23(13): 1623-1630 (2007)
- [j2]André Fujita, João Ricardo Sato, Carlos Eduardo Ferreira, Mari Cleide Sogayar: GEDI: a user-friendly toolbox for analysis of large-scale gene expression data. BMC Bioinformatics 8 (2007)
- 2006
- [j1]André Fujita, João Ricardo Sato, Leonardo de Oliveira Rodrigues, Carlos Eduardo Ferreira, Mari Cleide Sogayar: Evaluating different methods of microarray data normalization. BMC Bioinformatics 7: 469 (2006)
Coauthor Index
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last updated on 2013-06-13 23:08 CEST by the dblp team