Andrean Goede

Jochen Ismer, Alexander Rose, Johanna K. S. Tiemann, Andrean Goede, Kristian Rother, Peter Werner Hildebrand: Voronoia4RNA - a database of atomic packing densities of RNA structures and their complexes. Nucleic Acids Research 41(Database-Issue): 280-284 (2013)

Alexander Rose, Andrean Goede, Peter Werner Hildebrand: MPlot - a server to analyze and visualize tertiary structure contacts and geometrical features of helical membrane proteins. Nucleic Acids Research 38(Web-Server-Issue): 602-608 (2010)

Kristian Rother, Peter Werner Hildebrand, Andrean Goede, Bjoern Gruening, Robert Preissner: Voronoia: analyzing packing in protein structures. Nucleic Acids Research 37(Database-Issue): 393-395 (2009)

Peter Werner Hildebrand, Andrean Goede, Raphael A. Bauer, Bjoern Gruening, Jochen Ismer, Elke Michalsky, Robert Preissner: SuperLooper - a prediction server for the modeling of loops in globular and membrane proteins. Nucleic Acids Research 37(Web-Server-Issue): 571-574 (2009)

Alexander Rose, Stephan Lorenzen, Andrean Goede, Björn Gruening, Peter Werner Hildebrand: RHYTHM - a server to predict the orientation of transmembrane helices in channels and membrane-coils. Nucleic Acids Research 37(Web-Server-Issue): 575-580 (2009)

Raphael A. Bauer, Philip E. Bourne, Arno Formella, Cornelius Frömmel, Christoph Gille, Andrean Goede, Aysam Guerler, Andreas Hoppe, Ernst-Walter Knapp, Thorsten Pöschel, Burghardt Wittig, Valentin Ziegler, Robert Preissner: Superimposé: a 3D structural superposition server. Nucleic Acids Research 36(Web-Server-Issue): 47-54 (2008)

Andrean Goede, Elke Michalsky, Ulrike Schmidt, Robert Preissner: SuperMimic - Fitting peptide mimetics into protein structures. BMC Bioinformatics 7: 11 (2006)

Stefan Günther, Christian Senger, Elke Michalsky, Andrean Goede, Robert Preissner: Representation of target-bound drugs by computed conformers: implications for conformational libraries. BMC Bioinformatics 7: 293 (2006)

Kristian Rother, Mathias Dunkel, Elke Michalsky, Silke Trißl, Andrean Goede, Ulf Leser, Robert Preissner: A structural keystone for drug design. J. Integrative Bioinformatics 3(1) (2006)

Andrean Goede, Mathias Dunkel, Nina Mester, Cornelius Frömmel, Robert Preissner: SuperDrug: a conformational drug database. Bioinformatics 21(9): 1751-1753 (2005)

Elke Michalsky, Mathias Dunkel, Andrean Goede, Robert Preissner: SuperLigands - a database of ligand structures derived from the Protein Data Bank. BMC Bioinformatics 6: 122 (2005)

Andrean Goede, Ines S. Jaeger, Robert Preissner: SUPERFICIAL - Surface mapping of proteins via structure-based peptide library design. BMC Bioinformatics 6: 223 (2005)

Martin Thimm, Andrean Goede, Stefan Hougardy, Robert Preissner: Comparison of 2D Similarity and 3D Superposition. Application to Searching a Conformational Drug Database. Journal of Chemical Information and Modeling 44(5): 1816-1822 (2004)

Kristian Rother, Robert Preissner, Andrean Goede, Cornelius Frömmel: Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteins. Bioinformatics 19(16): 2112-2121 (2003)

Cornelius Frömmel, Christoph Gille, Andrean Goede, Clemens Gröpl, Stefan Hougardy, Till Nierhoff, Robert Preissner, Martin Thimm: Accelerating screening of 3D protein data with a graph theoretical approach. Bioinformatics 19(18): 2442-2447 (2003)

Robert Preissner, Andrean Goede, Kristian Rother, F. Osterkamp, U. Koert, Cornelius Frömmel: Matching organic libraries with protein-substructures. Journal of Computer-Aided Molecular Design 15(9): 811-817 (2001)

Robert Preissner, Andrean Goede, Cornelius Frömmel: Homonyms and synonyms in the Dictionary of Interfaces in Proteins (DIP). Bioinformatics 15(10): 832-836 (1999)

Christoph Gille, Andrean Goede, Kristian Rother, Robert Preissner, Cornelius Frömmel: Interfaces of Secondary Structural Elements in Proteins - Evolution of Atomic Substructures -. German Conference on Bioinformatics 1999: 196

Christoph Gille, Andrean Goede, Robert Preissner, Cornelius Frömmel: Atomic patch similarity as a criterion of evolutionary relationship between proteins. German Conference on Bioinformatics 1998

Andrean Goede, Robert Preissner, Cornelius Frömmel: A procedure for superposition of two arbitrary atomic arrangements. German Conference on Bioinformatics 1998

Robert Preissner, Andrean Goede, Cornelius Frömmel: Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patches. German Conference on Bioinformatics 1998

Andrean Goede, Robert Preissner, Cornelius Frömmel: Voronoi cell: New method for allocation of space among atoms: Elimination of avoidable errors in calculation of atomic volume and density. Journal of Computational Chemistry 18(9): 1113-1123 (1997)