Graciela Gonzalez

Siddhartha Jonnalagadda, Trevor Cohen, Stephen Tze-Inn Wu, Graciela Gonzalez: Enhancing clinical concept extraction with distributional semantics. Journal of Biomedical Informatics 45(1): 129-140 (2012)

Luis Tari, Phan Huy Tu, Jörg Hakenberg, Yi Chen, Tran Cao Son, Graciela Gonzalez, Chitta Baral: Incremental Information Extraction Using Relational Databases. IEEE Trans. Knowl. Data Eng. 24(1): 86-99 (2012)

Robert Yao, Jeffrey Buchhalter, Graciela Gonzalez: Proposed Ontology for Seizure and Epilepsy. ICBO 2012

Jörg Hakenberg, Martin Gerner, Maximilian Haeussler, Illés Solt, Conrad Plake, Michael Schroeder, Graciela Gonzalez, Goran Nenadic, Casey M. Bergman: The GNAT library for local and remote gene mention normalization. Bioinformatics 27(19): 2769-2771 (2011)

Martin Krallinger, Miguel Vazquez, Florian Leitner, David Salgado, Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto, Leonardo Briganti, Luana Licata, Marta Iannuccelli, Luisa Castagnoli, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi, Robert Leaman, Graciela Gonzalez, Sérgio Matos, Sun Kim, W. John Wilbur, Luis Rocha, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafal Rak, Keith Noto, Charles Elkan, Zhiyong Lu: The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text. BMC Bioinformatics 12(S-8): S3 (2011)

Graciela Gonzalez: Biomedical Informatics in Translational Research, Hai Hu, Richard J. Mural, Michael N. Liebman (Eds.). Artech House (2008). Journal of Biomedical Informatics 44(2): 370-371 (2011)

Robert Yao, Graciela Gonzalez: Applications for a Translational Biomedical Ontology Model. ICBO 2011

Ehsan Emadzadeh, Siddhartha Jonnalagadda, Graciela Gonzalez: Evaluating Distributional Semantic and Feature Selection for Extracting Relationships from Biological Text. ICMLA (2) 2011: 66-71

Ryan Sullivan, Robert Leaman, Graciela Gonzalez: The DIEGO Lab Graph Based Gene Normalization System. ICMLA (2) 2011: 78-83

Jang Lee, Graciela Gonzalez: Towards Integrative Gene Prioritization in Alzheimer's Disease. Pacific Symposium on Biocomputing 2011: 4-13

Siddhartha Jonnalagadda, Graciela Gonzalez: BioSimplify: an open source sentence simplification engine to improve recall in automatic biomedical information extraction. CoRR abs/1107.5744 (2011)

Jörg Hakenberg, Robert Leaman, Nguyen Ha Vo, Siddhartha Jonnalagadda, Ryan Sullivan, Christopher Miller, Luis Tari, Chitta Baral, Graciela Gonzalez: Efficient Extraction of Protein-Protein Interactions from Full-Text Articles. IEEE/ACM Trans. Comput. Biology Bioinform. 7(3): 481-494 (2010)

Siddhartha Jonnalagadda, Robert Leaman, Trevor Cohen, Graciela Gonzalez: A Distributional Semantics Approach to Simultaneous Recognition of Multiple Classes of Named Entities. CICLing 2010: 224-235

Luis Tari, Phan Huy Tu, Jörg Hakenberg, Yi Chen, Tran Cao Son, Graciela Gonzalez, Chitta Baral: GenerIE: Information extraction using database queries. ICDE 2010: 1121-1124

Siddhartha Jonnalagadda, Graciela Gonzalez: Sentence Simplification Aids Protein-Protein Interaction Extraction. CoRR abs/1001.4273 (2010)

Siddhartha Jonnalagadda, Philip Topham, Graciela Gonzalez: ONER: Tool for Organization Named Entity Recognition from Affiliation Strings in PubMed Abstracts. CoRR abs/1001.4274 (2010)

Siddhartha Jonnalagadda, Philip Topham, Graciela Gonzalez: Towards Automatic Extraction of Social Networks of Organizations in PubMed Abstracts. CoRR abs/1001.4276 (2010)

Siddhartha Jonnalagadda, Luis Tari, Jörg Hakenberg, Chitta Baral, Graciela Gonzalez: Towards Effective Sentence Simplification for Automatic Processing of Biomedical Text. CoRR abs/1001.4277 (2010)

Siddhartha Jonnalagadda, Luis Tari, Jörg Hakenberg, Chitta Baral, Graciela Gonzalez: Towards Effective Sentence Simplification for Automatic Processing of Biomedical Text. HLT-NAACL (Short Papers) 2009: 177-180

Luis Tari, Jörg Hakenberg, Graciela Gonzalez, Chitta Baral: Querying Parse Tree Database of Medline Text to Synthesize User-Specific Biomolecular Networks. Pacific Symposium on Biocomputing 2009: 87-98

Jörg Hakenberg, Conrad Plake, Robert Leaman, Michael Schroeder, Graciela Gonzalez: Inter-species normalization of gene mentions with GNAT. ECCB 2008: 126-132

Robert Leaman, Graciela Gonzalez: BANNER: An Executable Survey of Advances in Biomedical Named Entity Recognition. Pacific Symposium on Biocomputing 2008: 652-663

Graciela Gonzalez, Janaka Balasooriya: Web Service Orchestration for Bioinformatics Systems: Challenges and Current Workflow Definition Approaches. ICWS 2007: 1226-1227

Graciela Gonzalez, Juan C. Uribe, Luis Tari, Colleen Brophy, Chitta Baral: Mining Gene-Disease Relationships from Biomedical Literature: Weighting Proteinprotein Interactions and Connectivity. Pacific Symposium on Biocomputing 2007: 28-39

Luis Tari, Phan Huy Tu, Barry Lumpkin, Robert Leaman, Graciela Gonzalez, Chitta Baral: Passage Relevancy Through Semantic Relatedness. TREC 2007

Graciela Gonzalez: A systematic approach to active and cooperative learning in CS1 and its effects on CS2. SIGCSE 2006: 133-137

Luis Tari, Graciela Gonzalez, Robert Leaman, Shawn Nikkila, Ryan Wendt, Chitta Baral: ASU at TREC 2006 Genomics Track. TREC 2006

Graciela Gonzalez, Chitta Baral, Michael Gelfond: Alan: An Action Language For Modelling Non-Markovian Domains. Studia Logica 79(1): 115-134 (2005)

Lian Yu, Syed Toufeeq Ahmed, Graciela Gonzalez, Brendan Logsdon, Mutsumi Nakamura, Shawn Nikkila, Kalpesh Shah, Luis Tari, Ryan Wendt, Amanda Zeigler, Chitta Baral: Genomic Information Retrieval Through Selective Extraction and Tagging by the ASU-BioAL Group. TREC 2005

Graciela Gonzalez, Chitta Baral, Peter A. Cooper: Modeling Multimedia Displays Using Action Based Temporal Logic. VDB 2002: 141-155

Chitta Baral, Graciela Gonzalez: Specifying Generic Multimedia 3D Visualizations and Temporal Presentations from Database Queries. ICMCS, Vol. 1 1999: 550-555

Chitta Baral, Graciela Gonzalez, Tran Cao Son: Conceptual Modeling and Querying in Multimedia Databases. Multimedia Tools Appl. 7(1/2): 37-66 (1998)

Graciela Gonzalez: Intervals Help to Design an Imaging System. Reliable Computing 4(1): 103-104 (1998)

Chitta Baral, Graciela Gonzalez, Tran Cao Son: Design and Implementation of Display Specification for Multimedia Answers. ICDE 1998: 558-565

Chitta Baral, Graciela Gonzalez, Amarendra Nandigam: SQL+D: Extended Display Capabilities for Multimedia Database Queries. ACM Multimedia 1998: 109-114