Jeffrey S. Grethe

Syam Gadde, Nicole Aucoin, Jeffrey S. Grethe, David B. Keator, Daniel S. Marcus, Steve Pieper: XCEDE: An Extensible Schema for Biomedical Data. Neuroinformatics 10(1): 19-32 (2012)

Vadim Astakhov, Anita Bandrowski, Amarnath Gupta, A. W. Kulungowski, Jeffrey S. Grethe, James Bouwer, T. Molin, V. Rowley, S. Penticoff, Masako Terada, W. Wong, Hiroyuki Hakozaki, O. Kwon, Maryann E. Martone, Mark H. Ellisman: Prototype of Kepler Processing Workflows For Microscopy And Neuroinformatics. Procedia CS 9: 1595-1603 (2012)

Fahim T. Imam, Stephen D. Larson, Anita Bandrowski, Jeffrey S. Grethe, Amarnath Gupta, Maryann E. Martone: Maturation of Neuroscience Information Framework: An Ontology Driven Information System for Neuroscience. FOIS 2012: 15-28

Shulei Sun, Jing Chen, Weizhong Li, Ilkay Altintas, Abel W. Lin, Steven Peltier, Karen Stocks, Eric E. Allen, Mark H. Ellisman, Jeffrey S. Grethe, John C. Wooley: Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource. Nucleic Acids Research 39(Database-Issue): 546-551 (2011)

Abel W. Lin, Ilkay Altintas, Chris Churas, Madhusudan Gujral, Jeffrey S. Grethe, Mark H. Ellisman: Case Study on the Use of REST Architectural Principles for Scientific Analysis: CAMERA - Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis. REST: From Research to Practice 2011: 319-338

Fahim T. Imam, Stephen D. Larson, Jeffrey S. Grethe, Amarnath Gupta, Anita Bandrowski, Maryann E. Martone: NIFSTD and NeuroLex: Comprehensive Neuroscience Ontology Development Based on Multiple Biomedical Ontologies and Community Involvement. ICBO 2011

Chris Mungall, David Anderson, Anita Bandrowski, Brian A. Canada, Andrew Chatr-aryamontri, Keith C. Cheng, P. Michael Conn, Kara Dolinski, Mark H. Ellisman, Janan T. Eppig, Jeffrey S. Grethe, Joseph Kemnitz, Shawn Iadonato, Stephen D. Larson, Charles Magness, Maryann E. Martone, Mike Tyers, Carlo Torniai, Olga G. Troyanskaya, Judith Turner, Monte Westerfield, Melissa Haendel: An Ontology-Based Approach to Linking Model Organisms and Resources to Human Diseases. ICBO 2011

I. Burak Ozyurt, David B. Keator, Dingying Wei, Christine Fennema-Notestine, Karen R. Pease, H. Jeremy Bockholt, Jeffrey S. Grethe: Federated Web-accessible Clinical Data Management within an Extensible NeuroImaging Database. Neuroinformatics 8(4): 231-249 (2010)

Ilkay Altintas, Abel W. Lin, Jing Chen, Chris Churas, Madhusudan Gujral, Shulei Sun, Weizhong Li, Ramil Manansala, Mayya Sedova, Jeffrey S. Grethe, Mark H. Ellisman: CAMERA 2.0: A Data-centric Metagenomics Community Infrastructure Driven by Scientific Workflows. SERVICES 2010: 352-359

Lynn Young, Samson W. Tu, Lakshika Tennakoon, David Vismer, Vadim Astakhov, Amarnath Gupta, Jeffrey S. Grethe, Maryann E. Martone, Amar K. Das, Matthew J. McAuliffe: Ontology driven data integration for autism research. CBMS 2009: 1-7

David N. Kennedy, Christian Haselgrove, Robert Buccigrossi, Jeffrey S. Grethe: Software Development for Neuroimaging: Promoting Community Access And Best Practices Through NITRC. ISBI 2009: 1146-1149

Daniel Gardner, Huda Akil, Giorgio A. Ascoli, Douglas M. Bowden, William J. Bug, Duncan E. Donohue, David H. Goldberg, Bernice Grafstein, Jeffrey S. Grethe, Amarnath Gupta, Maryam Halavi, David N. Kennedy, Luis N. Marenco, Maryann E. Martone, Perry L. Miller, Hans-Michael Müller, Adrian Robert, Gordon M. Shepherd, Paul W. Sternberg, David C. Van Essen, Robert W. Williams: The Neuroscience Information Framework: A Data and Knowledge Environment for Neuroscience. Neuroinformatics 6(3): 149-160 (2008)

William J. Bug, Giorgio A. Ascoli, Jeffrey S. Grethe, Amarnath Gupta, Christine Fennema-Notestine, Angela R. Laird, Stephen D. Larson, Daniel Rubin, Gordon M. Shepherd, Jessica A. Turner, Maryann E. Martone: The NIFSTD and BIRNLex Vocabularies: Building Comprehensive Ontologies for Neuroscience. Neuroinformatics 6(3): 175-194 (2008)

Amarnath Gupta, William J. Bug, Luis N. Marenco, Xufei Qian, Christopher Condit, Arun Rangarajan, Hans-Michael Müller, Perry L. Miller, Brian Sanders, Jeffrey S. Grethe, Vadim Astakhov, Gordon M. Shepherd, Paul W. Sternberg, Maryann E. Martone: Federated Access to Heterogeneous Information Resources in the Neuroscience Information Framework (NIF). Neuroinformatics 6(3): 205-217 (2008)

David B. Keator, Jeffrey S. Grethe, Daniel S. Marcus, B. Ozyurt, Syam Gadde, S. Murphy, Steve Pieper, Douglas N. Greve, R. Notestine, H. Jeremy Bockholt, Philip M. Papadopoulos: A National Human Neuroimaging Collaboratory Enabled by the Biomedical Informatics Research Network (BIRN). IEEE Transactions on Information Technology in Biomedicine 12(2): 162-172 (2008)

David B. Keator, Syam Gadde, Jeffrey S. Grethe, Derek V. Taylor, Steven G. Potkin, First Birn: A general XML schema and SPM toolbox for storage of neuro-imaging results and anatomical labels. Neuroinformatics 4(2): 199-211 (2006)

Vadim Astakhov, Amarnath Gupta, Jeffrey S. Grethe, Edward Ross, David Little, Aylin Yilmaz, Xufei Qian, Simone Santini, Maryann E. Martone, Mark H. Ellisman: Semantically Based Data Integration Environment for Biomedical Research. CBMS 2006: 171-176

Ron Kikinis, Tina Kapur, Martha Elizabeth Shenton, Jeffrey S. Grethe, Mark H. Ellisman: "Big Science" and Schizophrenia. ISBI 2006: 804-805

Vadim Astakhov, Amarnath Gupta, Simone Santini, Jeffrey S. Grethe: Data Integration in the Biomedical Informatics Research Network (BIRN). DILS 2005: 317-320

Amarnath Gupta, Bertram Ludäscher, Jeffrey S. Grethe, Maryann E. Martone: Towards a formalization of disease-specific ontologies for neuroinformatics. Neural Networks 16(9): 1277-1292 (2003)