Roderic Guigó

Dmitri D. Pervouchine, David G. Knowles, Roderic Guigó: Intron-centric estimation of alternative splicing from RNA-seq data. Bioinformatics 29(2): 273-274 (2013)

David G. Knowles, Maik Röder, Angelika Merkel, Roderic Guigó: Grape RNA-Seq analysis pipeline environment. Bioinformatics 29(5): 614-621 (2013)

Marco Mariotti, Roderic Guigó: Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes. Bioinformatics 26(21): 2656-2663 (2010)

Charles E. Chapple, Roderic Guigó, Alain Krol: SECISaln, a web-based tool for the creation of structure-based alignments of eukaryotic SECIS elements. Bioinformatics 25(5): 674-675 (2009)

Miguel Pignatelli, Florenci Serras, Andrés Moya, Roderic Guigó, Montserrat Corominas: CROC: finding chromosomal clusters in eukaryotic genomes. Bioinformatics 25(12): 1552-1553 (2009)

Sergi Castellano, Vadim N. Gladyshev, Roderic Guigó, Marla J. Berry: SelenoDB 1.0 : a database of selenoprotein genes, proteins and SECIS elements. Nucleic Acids Research 36(Database-Issue): 332-338 (2008)

Michael Sammeth, Sylvain Foissac, Roderic Guigó: A General Definition and Nomenclature for Alternative Splicing Events. PLoS Computational Biology 4(8) (2008)

Tyler S. Alioto, Roderic Guigó, Ernesto Picardi, Graziano Pesole: GenePC and ASPIC Integrate Gene Predictions with Expressed Sequence Alignments To Predict Alternative Transcripts. APBC 2008: 363-372

Michael Sammeth, Gabriel Valiente, Roderic Guigó: Bubbles: Alternative Splicing Events of Arbitrary Dimension in Splicing Graphs. RECOMB 2008: 372-395

Vincent Lacroix, Michael Sammeth, Roderic Guigó, Anne Bergeron: Exact Transcriptome Reconstruction from Short Sequence Reads. WABI 2008: 50-63

Arnaud Kerhornou, Roderic Guigó: BioMoby web services to support clustering of co-regulated genes based on similarity of promoter configurations. Bioinformatics 23(14): 1831-1833 (2007)

Enrique Blanco, Roderic Guigó, Xavier Messeguer: Multiple non-collinear TF-map alignments of promoter regions. BMC Bioinformatics 8 (2007)

Enrique Blanco, Domènec Farré, M. Mar Albà, Xavier Messeguer, Roderic Guigó: ABS: a database of Annotated regulatory Binding Sites from orthologous promoters. Nucleic Acids Research 34(Database-Issue): 63-67 (2006)

Enrique Blanco, Xavier Messeguer, Temple F. Smith, Roderic Guigó: Transcription Factor Map Alignment of Promoter Regions. PLoS Computational Biology 2(5) (2006)

Eduardo Eyras, Alexandre Reymond, Robert Castelo, Jacqueline M. Bye, Francisco Camara, Paul Flicek, Elizabeth J. Huckle, Genis Parra, David D. Shteynberg, Carine Wyss, Jane Rogers, Stylianos E. Antonarakis, Ewan Birney, Roderic Guigó, Michael R. Brent: Gene finding in the chicken genome. BMC Bioinformatics 6: 131 (2005)

Roderic Guigó, Federico Morán, Alfonso Valencia, Josep F. Abril: ECCB/JBI 2005. ECCB/JBI 2005: 2

Robert Castelo, Roderic Guigó: Splice site identification by idlBNs. ISMB/ECCB (Supplement of Bioinformatics) 2004: 69-76

Josep F. Abril, Roderic Guigó, Thomas Wiehe: gff2aplot: Plotting sequence comparisons. Bioinformatics 19(18): 2477-2479 (2003)

Roderic Guigó, Dan Gusfield (Eds.): Algorithms in Bioinformatics, Second International Workshop, WABI 2002, Rome, Italy, September 17-21, 2002, Proceedings. Lecture Notes in Computer Science 2452, Springer 2002, isbn 3-540-44211-1

Thomas Wiehe, Roderic Guigó, Webb Miller: Genome Sequence Comparisons: Hurdles in the Fast Lane to Functional Genomics. Briefings in Bioinformatics 1(4): 381-388 (2000)

Josep F. Abril, Roderic Guigó: gff2ps: visualizing genomic annotations. Bioinformatics 16(8): 743-744 (2000)

Roderic Guigó: Assembling Genes from Predicted Exons In Linear Time with Dynamic Programming. Journal of Computational Biology 5(4): 681-702 (1998)

Roderic Guigó: Computational Gene Identification: An Open Problem. Computers & Chemistry 21(4): 215-222 (1997)

Juan J. Lozano, Elena López-de-Briñas, Nuria B. Centeno, Roderic Guigó, Ferran Sanz: Three-dimensional modelling of human cytochrome P450 1A2 and its interaction with caffeine and MeIQ. Journal of Computer-Aided Molecular Design 11(4): 395-408 (1997)

Roderic Guigó, Temple F. Smith: Inferring Correlation Between Database Queries: Analysis of Protein Sequence Patterns. IEEE Trans. Pattern Anal. Mach. Intell. 15(10): 1030-1041 (1993)

Roderic Guigó, A. Johansson, Temple F. Smith: Automatic evaluation of protein sequence functional patterns. Computer Applications in the Biosciences 7(3): 309-315 (1991)