Hanspeter Herzel

Angela Relógio, Pål O. Westermark, Thomas Wallach, Katja Schellenberg, Achim Kramer, Hanspeter Herzel: Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops. PLoS Computational Biology 7(12) (2011)

Samuel Bernard, Branka Cajavec Bernard, Francis Lévi, Hanspeter Herzel: Tumor Growth Rate Determines the Timing of Optimal Chronomodulated Treatment Schedules. PLoS Computational Biology 6(3) (2010)

Pål O. Westermark, David K. Welsh, Hitoshi Okamura, Hanspeter Herzel: Quantification of Circadian Rhythms in Single Cells. PLoS Computational Biology 5(11) (2009)

Matthias E. Futschik, Hanspeter Herzel: Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis. Bioinformatics 24(8): 1063-1069 (2008)

Matthias E. Futschik, Gautam Chaurasia, Hanspeter Herzel: Comparison of human protein-protein interaction maps. Bioinformatics 23(5): 605-611 (2007)

Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik: Flexible web-based integration of distributed large-scale human protein interaction maps. J. Integrative Bioinformatics 4(1) (2007)

Matthias E. Futschik, Gautam Chaurasia, Anna Tschaut, Jenny Russ, M. Madan Babu, Hanspeter Herzel: Functional and Transcriptional Coherency of Modules in the Human Protein Interaction Network . J. Integrative Bioinformatics 4(3) (2007)

Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik: UniHI: an entry gate to the human protein interactome. Nucleic Acids Research 35(Database-Issue): 590-594 (2007)

Samuel Bernard, Didier Gonze, Branka Cajavec, Hanspeter Herzel, Achim Kramer: Synchronization-Induced Rhythmicity of Circadian Oscillators in the Suprachiasmatic Nucleus. PLoS Computational Biology 3(4) (2007)

Matthias E. Futschik, Hanspeter Herzel: Are we Overestimating the Number of Cell-Cycling Genes? The Impact of Background Models. German Conference on Bioinformatics 2007: 2-14

Stefan Legewie, Nils Blüthgen, Hanspeter Herzel: Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability. PLoS Computational Biology 2(9) (2006)

Matthias E. Futschik, Gautam Chaurasia, Erich E. Wanker, Hanspeter Herzel: Comparison of Human Protein-Protein Interaction Maps. German Conference on Bioinformatics 2006: 21-32

Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel: Measuring similarities between transcription factor binding sites. BMC Bioinformatics 6: 237 (2005)

Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier: HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Research 33(Database-Issue): 108-111 (2005)

Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel: Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction. PLoS Computational Biology 1(5) (2005)

Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel: HOMGL - comparing genelists across species and with different accession numbers. Bioinformatics 20(1): 125-126 (2004)

Maciej Swat, Alexander E. Kel, Hanspeter Herzel: Bifurcation analysis of the regulatory modules of the mammalian G1/S transition. Bioinformatics 20(10): 1506-1511 (2004)

Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel: Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. German Conference on Bioinformatics 2004: 105-114

Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel: Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. German Conference on Bioinformatics 2003: 147-152

Olaf Weiss, Andreas Ziehe, Hanspeter Herzel: Optimizing Property Codes in Protein Data Reveals Structural Characteristics. ICANN 2003: 245-252

Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel: Combining frequency and positional information to predict transcription factor binding sites. Bioinformatics 17(11): 1019-1026 (2001)

Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel: Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics 2000: 55-62

Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel: Reliability of Microarray Data and Clustering. German Conference on Bioinformatics 2000: 167-174

Johannes Schuchhardt, Liying Dong, Ulrich Hoffmüller, Achim Kramer, Jens Schneider-Mergener, Hanspeter Herzel: Peptide Binding Landscapes. German Conference on Bioinformatics 2000: 183-188

Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov: 10-11 bp periodicities in complete genomes reflect protein structure and DNA folding. Bioinformatics 15(3): 187-193 (1999)

Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel: Mutual Information Analysis of Surrogate Gene Expression Data. German Conference on Bioinformatics 1999: 201-204

Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov: Sequence Periodicities in Complete Genomes Reflect Supercoiling. German Conference on Bioinformatics 1998

Olaf Weiss, Hanspeter Herzel: Property Codes in Sets of Protein Sequences. German Conference on Bioinformatics 1998

Patrick Mergell, Hanspeter Herzel: Modelling biphonation - The role of the vocal tract. Speech Communication 22(2-3): 141-154 (1997)

Hanspeter Herzel, J. Wendler: Evidence of chaos in phonatory samples. EUROSPEECH 1991