Gemma L. Holliday

Rafael Alcántara, Joseph Onwubiko, Hong Cao, Paula de Matos, Jennifer A. Cham, Jules Jacobsen, Gemma L. Holliday, Julia D. Fischer, Syed Asad Rahman, Bijay Jassal, Mickael Goujon, Francis Rowland, Sameer Velankar, Rodrigo Lopez, John P. Overington, Gerard J. Kleywegt, Henning Hermjakob, Claire O'Donovan, Maria Jesus Martin, Janet M. Thornton, Christoph Steinbeck: The EBI enzyme portal. Nucleic Acids Research 41(Database-Issue): 773-780 (2013)

Nicholas Furnham, Ian Sillitoe, Gemma L. Holliday, Alison L. Cuff, Syed Asad Rahman, Roman A. Laskowski, Christine A. Orengo, Janet M. Thornton: FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies. Nucleic Acids Research 40(Database-Issue): 776-782 (2012)

Gemma L. Holliday, Claudia Andreini, Julia D. Fischer, Syed Asad Rahman, Daniel E. Almonacid, Sophie T. Williams, William R. Pearson: MACiE: exploring the diversity of biochemical reactions. Nucleic Acids Research 40(Database-Issue): 783-789 (2012)

Nicholas Furnham, Ian Sillitoe, Gemma L. Holliday, Alison L. Cuff, Roman A. Laskowski, Christine A. Orengo, Janet M. Thornton: Exploring the Evolution of Novel Enzyme Functions within Structurally Defined Protein Superfamilies. PLoS Computational Biology 8(3) (2012)

Julia D. Fischer, Gemma L. Holliday, Janet M. Thornton: The CoFactor database: organic cofactors in enzyme catalysis. Bioinformatics 26(19): 2496-2497 (2010)

Claudia Andreini, Ivano Bertini, Gabriele Cavallaro, Gemma L. Holliday, Janet M. Thornton: Metal-MACiE: a database of metals involved in biological catalysis. Bioinformatics 25(16): 2088-2089 (2009)

Syed Asad Rahman, Matthew Bashton, Gemma L. Holliday, Rainer Schrader, Janet M. Thornton: Small Molecule Subgraph Detector (SMSD) toolkit. J. Cheminformatics 1: 12 (2009)

Gemma L. Holliday, Daniel E. Almonacid, Gail J. Bartlett, Noel M. O'Boyle, James W. Torrance, Peter Murray-Rust, John B. O. Mitchell, Janet M. Thornton: MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms. Nucleic Acids Research 35(Database-Issue): 515-520 (2007)

Gemma L. Holliday, Peter Murray-Rust, Henry S. Rzepa: Chemical Markup, XML, and the World Wide Web. 6. CMLReact, an XML Vocabulary for Chemical Reactions. Journal of Chemical Information and Modeling 46(1): 145-157 (2006)

Gemma L. Holliday, Gail J. Bartlett, Daniel E. Almonacid, Noel M. O'Boyle, Peter Murray-Rust, Janet M. Thornton, John B. O. Mitchell: MACiE: a database of enzyme reaction mechanisms. Bioinformatics 21(23): 4315-4316 (2005)