Ali Kamen

Lucian Mihai Itu, Puneet Sharma, Vwrel Mihalef, Ali Kamen, Constantin Suciu, Dorm Lomaniciu: A patient-specific reduced-order model for coronary circulation. ISBI 2012: 832-835

Bernhard Fuerst, Tommaso Mansi, Parmeshwar Khurd, Jingdan Zhang, Jérôme Declerck, Thomas Boettger, Nassir Navab, John E. Bayouth, Ali Kamen: Patient-specific finite-element simulation of respiratory mechanics for radiotherapy guidance, a first evaluation study. ISBI 2012: 1212-1215

Tommaso Mansi, Viorel Mihalef, Puneet Sharma, Bogdan Georgescu, Xudong Zheng, Saikiran Rapaka, Ali Kamen, Derliz Mereles, Henning Steen, Benjamin Meder, Hugo A. Katus, Dorin Comaniciu: Data-driven computational models of heart anatomy, mechanics and hemodynamics: An integrated framework. ISBI 2012: 1434

Saikiran Rapaka, Tommaso Mansi, Bogdan Georgescu, Mihaela Pop, Graham A. Wright, Ali Kamen, Dorin Comaniciu: LBM-EP: Lattice-Boltzmann Method for Fast Cardiac Electrophysiology Simulation from 3D Images. MICCAI (2) 2012: 33-40

Bernhard Fuerst, Tommaso Mansi, Jianwen Zhang, Parmeshwar Khurd, Jérôme Declerck, Thomas Boettger, Nassir Navab, John E. Bayouth, Dorin Comaniciu, Ali Kamen: A Personalized Biomechanical Model for Respiratory Motion Prediction. MICCAI (3) 2012: 566-573

O. Fluck, Christoph Vetter, Wolfgang Wein, Ali Kamen, Bernhard Preim, Rüdiger Westermann: A survey of medical image registration on graphics hardware. Computer Methods and Programs in Biomedicine 104(3): 45- (2011)

Darko Zikic, Maximilian Baust, Ali Kamen, Nassir Navab: A general preconditioning scheme for difference measures in deformable registration. ICCV 2011: 49-56

Parmeshwar Khurd, Leo Grady, Ali Kamen, Summer Gibbs-Strauss, Elizabeth Genega, John V. Frangioni: Network cycle features: Application to computer-aided Gleason grading of prostate cancer histopathological images. ISBI 2011: 1632-1636

Parmeshwar Khurd, Leo Grady, Kalpitkumar Gajera, Mamadou Diallo, Peter Gall, Martin Requardt, Berthold Kiefer, Clifford Weiss, Ali Kamen: Facilitating 3D Spectroscopic Imaging through Automatic Prostate Localization in MR Images Using Random Walker Segmentation Initialized via Boosted Classifiers. Prostate Cancer Imaging 2011: 47-56

Darko Zikic, Ben Glocker, Oliver Kutter, Martin Groher, Nikos Komodakis, Ali Kamen, Nikos Paragios, Nassir Navab: Linear intensity-based image registration by Markov random fields and discrete optimization. Medical Image Analysis 14(4): 550-562 (2010)

Darko Zikic, Ali Kamen, Nassir Navab: Revisiting Horn and Schunck: Interpretation as Gauss-Newton Optimisation. BMVC 2010: 1-12

Darko Zikic, Ali Kamen, Nassir Navab: Natural gradients for deformable registration. CVPR 2010: 2847-2854

Parmeshwar Khurd, Claus Bahlmann, Peter Maday, Ali Kamen, Summer Gibbs-Strauss, Elizabeth Genega, John V. Frangioni: Computer-aided Gleason grading of prostate cancer histopathological images using texton forests. ISBI 2010: 636-639

Wolfgang Wein, Oliver Kutter, André Aichert, Darko Zikic, Ali Kamen, Nassir Navab: Automatic non-linear mapping of pre-procedure ct volumes to 3D ultrasound. ISBI 2010: 1225-1228

Christoph Vetter, Ali Kamen, Parmeshwar Khurd, Rüdiger Westermann: A Learning-Based Approach to Evaluate Registration Success. MIAR 2010: 429-437

Rui Liao, Yunhao Tan, Hari Sundar, Marcus Pfister, Ali Kamen: An Efficient Graph-Based Deformable 2D/3D Registration Algorithm with Applications for Abdominal Aortic Aneurysm Interventions. MIAR 2010: 561-570

Peter Maday, Parmeshwar Khurd, Lance Ladic, Mitchell D. Schnall, Mark Rosen, Christos Davatzikos, Ali Kamen: Imaging as a Surrogate for the Early Prediction and Assessment of Treatment Response through the Analysis of 4-D Texture Ensembles (ISEPARATE). MCV 2010: 164-173

Björn Beuthien, Ali Kamen, Bernd Fischer: Recursive Green's Function Registration. MICCAI (2) 2010: 546-553

Darko Zikic, Maximilian Baust, Ali Kamen, Nassir Navab: Generalization of Deformable Registration in Riemannian Sobolev Spaces. MICCAI (2) 2010: 586-593

Darko Zikic, Ali Kamen, Nassir Navab: Unifying Characterization of Deformable Registration Methods Based on the Inherent Parametrization. WBIR 2010: 161-172

Martin Groher, Frederik Bender, Ali Khamene, Wolfgang Wein, Tim Hauke Heibel, Nassir Navab: 3D Guide Wire Navigation from Single Plane Fluoroscopic Images in Abdominal Catheterizations. Bildverarbeitung für die Medizin 2009: 356-360

Wolfgang Wein, Estelle Camus, Matthias John, Mamadou Diallo, Christophe Duong, Amin Al-Ahmad, Rebecca Fahrig, Ali Khamene, Chenyang Xu: Towards Guidance of Electrophysiological Procedures with Real-Time 3D Intracardiac Echocardiography Fusion to C-arm CT. MICCAI (1) 2009: 9-16

Hari Sundar, Ali Khamene, Liron Yatziv, Chenyang Xu: Automatic Image-Based Cardiac and Respiratory Cycle Synchronization and Gating of Image Sequences. MICCAI (1) 2009: 381-388

Ali Khamene, Darko Zikic, Mamadou Diallo, Thomas Boettger, Eike Rietzel: A Novel Intensity Similarity Metric with Soft Spatial Constraint for a Deformable Image Registration Problem in Radiation Therapy. MICCAI (1) 2009: 828-836

Wolfgang Wein, Shelby Brunke, Ali Khamene, Matthew R. Callstrom, Nassir Navab: Automatic CT-ultrasound registration for diagnostic imaging and image-guided intervention. Medical Image Analysis 12(5): 577-585 (2008)

Darko Zikic, Michael Sass Hansen, Ben Glocker, Ali Khamene, Rasmus Larsen, Nassir Navab: Computing minimal deformations: application to construction of statistical shape models. CVPR 2008

Frederik Bender, Martin Groher, Ali Khamene, Wolfgang Wein, Tim Hauke Heibel, Nassir Navab: 3D Dynamic Roadmapping for Abdominal Catheterizations. MICCAI (2) 2008: 668-675

Ali Khamene, Fred S. Azar, Loren Arthur Schwarz, Darko Zikic, Nassir Navab, Eike Rietzel: A Unified and Efficient Approach for Free-form Deformable Registration. ICCV 2007: 1-8

Ali Khamene, Christian Schaller, Joachim Hornegger, Juan Carlos Celi, Barbara Ofstad, Eike Rietzel, X. Allen Li, An Tai, John E. Bayouth: A Novel Image Based Verification Method for Respiratory Motion Management in Radiation Therapy. ICCV 2007: 1-7

Tobias Sielhorst, Wu Sa, Ali Khamene, Frank Sauer, Nassir Navab: Measurement of absolute latency for video see through augmented reality. ISMAR 2007: 215-220

Wolfgang Wein, Ali Khamene, Dirk-André Clevert, Oliver Kutter, Nassir Navab: Simulation and Fully Automatic Multimodal Registration of Medical Ultrasound. MICCAI (1) 2007: 136-143

Sebastian Vogt, Ali Khamene, Frank Sauer: Reality Augmentation for Medical Procedures: System Architecture, Single Camera Marker Tracking, and System Evaluation. International Journal of Computer Vision 70(2): 179-190 (2006)

Ali Khamene, Peter Bloch, Wolfgang Wein, Michelle Svatos, Frank Sauer: Automatic registration of portal images and volumetric CT for patient positioning in radiation therapy. Medical Image Analysis 10(1): 96-112 (2006)

Rui Liao, Christoph Guetter, Chenyang Xu, Yiyong Sun, Ali Khamene, Frank Sauer: Learning-Based 2D/3D Rigid Registration Using Jensen-Shannon Divergence for Image-Guided Surgery. MIAR 2006: 228-235

Darko Zikic, Wolfgang Wein, Ali Khamene, Dirk-André Clevert, Nassir Navab: Fast Deformable Registration of 3D-Ultrasound Data Using a Variational Approach. MICCAI (1) 2006: 915-923

Ali Khamene, Razvan Chisu, Wolfgang Wein, Nassir Navab, Frank Sauer: A Novel Projection Based Approach for Medical Image Registration. WBIR 2006: 247-256

Mikaël Rousson, Ali Khamene, Mamadou Diallo, Juan Carlos Celi, Frank Sauer: Constrained Surface Evolutions for Prostate and Bladder Segmentation in CT Images. CVBIA 2005: 251-260

Charles Florin, James Williams, Ali Khamene, Nikos Paragios: Registration of 3D Angiographic and X-Ray Images Using Sequential Monte Carlo Sampling. CVBIA 2005: 427-436

Ali Khamene, Frank Sauer: A Novel Phantom-Less Spatial and Temporal Ultrasound Calibration Method. MICCAI (2) 2005: 65-72

Ali Khamene, Jan Karl Warzelhan, Sebastian Vogt, Daniel Elgort, Christophe Chefd'Hotel, Jeffrey L. Duerk, Jonathan S. Lewin, Frank K. Wacker, Frank Sauer: Characterization of Internal Organ Motion Using Skin Marker Positions. MICCAI (2) 2004: 526-533

Ali Khamene, Shahriar Negahdaripour: Motion and structure from multiple cues; image motion, shading flow, and stereo disparity. Computer Vision and Image Understanding 90(1): 99-127 (2003)

Matthias Mitschke, Ali R. Bani-Hashemi, Fahrhad Ghelmansarai, Ali Khamene, Jean Pouliot: 3D tomographic reconstruction from portal imaging for patient positioning. CARS 2003: 107-111

Sebastian Vogt, Ali Khamene, Frank Sauer, Andreas Keil, Heinrich Niemann: A High Performance AR System for Medical Applications. ISMAR 2003: 270-271

Ali Khamene, Sebastian Vogt, Fred S. Azar, Tobias Sielhorst, Frank Sauer, Heinrich Niemann: Local 3D Reconstruction and Augmented Reality Visualization of Free-Hand Ultrasound for Needle Biopsy Procedures. MICCAI (2) 2003: 344-355

Nassir Navab, Yakup Genc, Ali Khamene, Matthias Mitschke: Direct Method for Motion Estimation: An Alternative to Decomposition of Planar Transformation Matrices. DAGM-Symposium 2002: 575-582

Sebastian Vogt, Ali Khamene, Frank Sauer, Heinrich Niemann: Single Camera Tracking of Marker Clusters: Multiparameter Cluster Optimization and Experimental Verification. ISMAR 2002: 127-

Frank Sauer, Ali Khamene, Sebastian Vogt: An Augmented Reality Navigation System with a Single-Camera Tracker: System Design and Needle Biopsy Phantom Trial. MICCAI (2) 2002: 116-124

Frank Sauer, Ali Khamene, Benedicte Bascle, Lars Schimmang, Fabian Wenzel, Sebastian Vogt: Augmented Reality Visualization of Ultrasound Images: System Description, Calibration, and Feature. ISAR 2001: 30-

Yakup Genc, Mihran Tuceryan, Ali Khamene, Nassir Navab: Optical See-through Calibration with Vision-Based Trackers: Propagation of Projection Matrices. ISAR 2001: 147-156

Frank Sauer, Ali Khamene, Benedicte Bascle, G. J. Rubino: A Head-Mounted Display System for Augmented Reality Image Guidance: Towards Clinical Evaluation for iMRI-guided Neurosurgery. MICCAI 2001: 707-716

Shahriar Negahdaripour, Ali Khamene: Motion-Based Compression of Underwater Video Imagery for the Operations of Unmanned Submersible Vehicles. Computer Vision and Image Understanding 79(1): 162-183 (2000)

Ali Khamene, Shahriar Negahdaripour, Scheffer C. G. Tseng: A spectral-discrimination method for tear-film lipid-layer thickness estimation from fringe pattern images. IEEE Trans. Biomed. Engineering 47(2): 249-258 (2000)

Ali Khamene, Shahriar Negahdaripour: A new method for the extraction of fetal ECG from the composite abdominal signal. IEEE Trans. Biomed. Engineering 47(4): 507-516 (2000)