Jessica C. Kissinger

Cristina Aurrecoechea, Ana Barreto, John Brestelli, Brian P. Brunk, Shon Cade, Ryan Doherty, Steve Fischer, Bindu Gajria, Xin Gao, Alan Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Sufen Hu, John Iodice, Jessica C. Kissinger, Eileen Kraemer, Wei Li, Deborah F. Pinney, Brian Pitts, David S. Roos, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Haiming Wang, Susanne Warrenfeltz: EuPathDB: The Eukaryotic Pathogen database. Nucleic Acids Research 41(Database-Issue): 684-691 (2013)

Adhemar Zerlotini, Eric R. G. R. Aguiar, Fudong Yu, Huayong Xu, Yixue Li, Neil D. Young, Robin B. Gasser, Anna V. Protasio, Matthew Berriman, David S. Roos, Jessica C. Kissinger, Guilherme Oliveira: SchistoDB: an updated genome resource for the three key schistosomes of humans. Nucleic Acids Research 41(Database-Issue): 728-731 (2013)

Jason E. Stajich, Todd Harris, Brian P. Brunk, John Brestelli, Steve Fischer, Omar S. Harb, Jessica C. Kissinger, Wei Li, Vishal Nayak, Deborah F. Pinney, Christian J. Stoeckert Jr., David S. Roos: FungiDB: an integrated functional genomics database for fungi. Nucleic Acids Research 40(Database-Issue): 675-681 (2012)

Alok Dhamanaskar, Michael E. Cotterell, Jie Zheng, Jessica C. Kissinger, Christian J. Stoeckert Jr., John A. Miller: Suggestions for Galaxy Workflow Design Using Semantically Annotated Services. FOIS 2012: 29-42

Cristina Aurrecoechea, Ana Barreto, John Brestelli, Brian P. Brunk, Elisabet V. Caler, Steve Fischer, Bindu Gajria, Xin Gao, Alan Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, John Iodice, Jessica C. Kissinger, Eileen Kraemer, Wei Li, Vishal Nayak, Cary Pennington, Deborah F. Pinney, Brian Pitts, David S. Roos, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Charles Treatman, Haiming Wang: AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species. Nucleic Acids Research 39(Database-Issue): 612-619 (2011)

Chaitanya Guttula, Alok Dhamanaskar, Rui Wang, John A. Miller, Jessica C. Kissinger, Jie Zheng, Christian J. Stoeckert Jr.: Enriching the Ontology for Biomedical Investigations (OBI) to Improve its Suitability for Web Service Annotations. ICBO 2011

Rui Wang, Chaitanya Guttula, Maryam Panahiazar, Haseeb Yousaf, John A. Miller, Eileen Kraemer, Jessica C. Kissinger: Web Service Composition Using Service Suggestions. SERVICES 2011: 482-489

Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Steve Fischer, Bindu Gajria, Xin Gao, Alan Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen Kraemer, Wei Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Ryan Thibodeau, Charles Treatman, Haiming Wang: EuPathDB: a portal to eukaryotic pathogen databases. Nucleic Acids Research 38(Database-Issue): 415-419 (2010)

Martin Aslett, Cristina Aurrecoechea, Matthew Berriman, John Brestelli, Brian P. Brunk, Mark Carrington, Daniel P. Depledge, Steve Fischer, Bindu Gajria, Xin Gao, Malcolm J. Gardner, Alan Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Christiane Hertz-Fowler, Robin Houston, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen Kraemer, Wei Li, Flora J. Logan, John A. Miller, Siddhartha Mitra, Peter J. Myler, Vishal Nayak, Cary Pennington, Isabelle Phan, Deborah F. Pinney, Gowthaman Ramasamy, Matthew B. Rogers, David S. Roos, Chris Ross, Dhileep Sivam, Deborah F. Smith, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Sandhya Subramanian, Ryan Thibodeau, Adrian Tivey, Charles Treatman, Giles Velarde, Haiming Wang: TriTrypDB: a functional genomic resource for the Trypanosomatidae. Nucleic Acids Research 38(Database-Issue): 457-462 (2010)

Zhiming Wang, Xin Gao, Congzhou He, John A. Miller, Jessica C. Kissinger, Mark Heiges, Eileen Kraemer: An Evaluation of Multiple Approaches for Federating Biological Data. JITR 2(2): 42-64 (2009)

Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jane M. Carlton, Jennifer Dommer, Steve Fischer, Bindu Gajria, Xin Gao, Alan Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen Kraemer, Wei Li, John A. Miller, Hilary G. Morrison, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Christian J. Stoeckert Jr., Steven Sullivan, Charles Treatman, Haiming Wang: GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis. Nucleic Acids Research 37(Database-Issue): 526-530 (2009)

Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jennifer Dommer, Steve Fischer, Bindu Gajria, Xin Gao, Alan Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen Kraemer, Wei Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Christian J. Stoeckert Jr., Charles Treatman, Haiming Wang: PlasmoDB: a functional genomic database for malaria parasites. Nucleic Acids Research 37(Database-Issue): 539-543 (2009)

Adhemar Zerlotini, Mark Heiges, Haiming Wang, Romulo L. V. Moraes, Anderson J. Dominitini, Jerônimo C. Ruiz, Jessica C. Kissinger, Guilherme Oliveira: SchistoDB: a Schistosoma mansoni genome resource. Nucleic Acids Research 37(Database-Issue): 579-582 (2009)

Rui Wang, Douglas Brewer, Shefali Shastri, Srikalyan Swayampakula, John A. Miller, Eileen Kraemer, Jessica C. Kissinger: Adapting the Galaxy Bioinformatics Tool to Support Semantic Web Service Composition. SERVICES I 2009: 283-290

Kelly Storm, Eileen Kraemer, Cristina Aurrecoechea, Mark Heiges, Cary Pennington, Jessica C. Kissinger: Web site evolution: Usability evaluation using Time Series Analysis of Selected Episode Graphs. WSE 2009: 27-36

Bindu Gajria, Amit Bahl, John Brestelli, Jennifer Dommer, Steve Fischer, Xin Gao, Mark Heiges, John Iodice, Jessica C. Kissinger, Aaron J. Mackey, Deborah F. Pinney, David S. Roos, Christian J. Stoeckert Jr., Haiming Wang, Brian P. Brunk: ToxoDB: an integrated Toxoplasma gondii database resource. Nucleic Acids Research 36(Database-Issue): 553-556 (2008)

Pablo N. Mendes, Bobby McKnight, Amit P. Sheth, Jessica C. Kissinger: TcruziKB: Enabling Complex Queries for Genomic Data Exploration. ICSC 2008: 432-439

Zhiming Wang, John A. Miller, Jessica C. Kissinger, Rui Wang, Douglas Brewer, Cristina Aurrecoechea: WS-BioZard: A Wizard for Composing Bioinformatics Web Services. SERVICES I 2008: 437-444

Cristina Aurrecoechea, Mark Heiges, Haiming Wang, Zhiming Wang, Steve Fischer, Philippa Rhodes, John A. Miller, Eileen Kraemer, Christian J. Stoeckert Jr., David S. Roos, Jessica C. Kissinger: ApiDB: integrated resources for the apicomplexan bioinformatics resource center. Nucleic Acids Research 35(Database-Issue): 427-430 (2007)

Zhiming Wang, Xin Gao, Congzhou He, John A. Miller, Jessica C. Kissinger, Mark Heiges, Cristina Aurrecoechea, Eileen Kraemer, Cary Pennington: A Comparison of Federated Databases with Web Services for the Integration of Bioinformatics Data. BIOCOMP 2007: 334-338

Haiming Wang, Yanqi Su, Aaron J. Mackey, Eileen Kraemer, Jessica C. Kissinger: SynView: a GBrowse-compatible approach to visualizing comparative genome data. Bioinformatics 22(18): 2308-2309 (2006)

Mark Heiges, Haiming Wang, Edward Robinson, Cristina Aurrecoechea, Xin Gao, Nivedita Kaluskar, Philippa Rhodes, Sammy Wang, Congzhou He, Yanqi Su, John A. Miller, Eileen Kraemer, Jessica C. Kissinger: CryptoDB: a Cryptosporidium bioinformatics resource update. Nucleic Acids Research 34(Database-Issue): 419-422 (2006)

Fernán Agüero, Wenlong Zheng, D. Brent Weatherly, Pablo N. Mendes, Jessica C. Kissinger: TcruziDB: an integrated, post-genomics community resource for Trypanosoma cruzi. Nucleic Acids Research 34(Database-Issue): 428-431 (2006)

Daniela Puiu, Shinichiro Enomoto, Gregory A. Buck, Mitchell S. Abrahamsen, Jessica C. Kissinger: CryptoDB: the Cryptosporidium genome resource. Nucleic Acids Research 32(Database-Issue): 329-331 (2004)

Michael Luchtan, Chetna Warade, D. Brent Weatherly, Wim M. Degrave, Rick L. Tarleton, Jessica C. Kissinger: TcruziDB: an integrated Trypanosoma cruzi genome resource. Nucleic Acids Research 32(Database-Issue): 344-346 (2004)

Amit Bahl, Brian P. Brunk, Jonathan Crabtree, Martin J. Fraunholz, Bindu Gajria, Gregory R. Grant, Hagai Ginsburg, Dinesh Gupta, Jessica C. Kissinger, Philip Labo, Li Li, Matthew D. Mailman, Arthur J. Milgram, David S. Pearson, David S. Roos, Jonathan Schug, Christian J. Stoeckert Jr., Patricia L. Whetzel: PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. Nucleic Acids Research 31(1): 212-215 (2003)

Jessica C. Kissinger, Bindu Gajria, Li Li, Ian T. Paulsen, David S. Roos: ToxoDB: accessing the Toxoplasma gondii genome. Nucleic Acids Research 31(1): 234-236 (2003)

Amit Bahl, Brian P. Brunk, Ross L. Coppel, Jonathan Crabtree, Sharon J. Diskin, Martin J. Fraunholz, Gregory R. Grant, Dinesh Gupta, Robert L. Huestis, Jessica C. Kissinger, Philip Labo, Li Li, Shannon K. McWeeney, Arthur J. Milgram, David S. Roos, Jonathan Schug, Christian J. Stoeckert Jr.: PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). Nucleic Acids Research 30(1): 87-90 (2002)