Arun Krishnan

Zheng Li, Ping Li, Arun Krishnan, Jingdong Liu: Large-scale dynamic gene regulatory network inference combining differential equation models with local dynamic Bayesian network analysis. Bioinformatics 27(19): 2686-2691 (2011)

Toshiro Kubota, Anna K. Jerebko, Maneesh Dewan, Marcos Salganicoff, Arun Krishnan: Segmentation of pulmonary nodules of various densities with morphological approaches and convexity models. Medical Image Analysis 15(1): 133-154 (2011)

Yimo Tao, Zhigang Peng, Arun Krishnan, Xiang Sean Zhou: Robust Learning-Based Parsing and Annotation of Medical Radiographs. IEEE Trans. Med. Imaging 30(2): 338-350 (2011)

Yiqiang Zhan, Maneesh Dewan, Martin Harder, Arun Krishnan, Xiang Sean Zhou: Robust Automatic Knee MR Slice Positioning Through Redundant and Hierarchical Anatomy Detection. IEEE Trans. Med. Imaging 30(12): 2087-2100 (2011)

Dijia Wu, Le Lu, Jinbo Bi, Yoshihisa Shinagawa, Kim L. Boyer, Arun Krishnan, Marcos Salganicoff: Stratified learning of local anatomical context for lung nodules in CT images. CVPR 2010: 2791-2798

Jun Ma, Le Lu, Yiqiang Zhan, Xiang Sean Zhou, Marcos Salganicoff, Arun Krishnan: Hierarchical Segmentation and Identification of Thoracic Vertebra Using Learning-Based Edge Detection and Coarse-to-Fine Deformable Model. MICCAI (1) 2010: 19-27

Xiang Sean Zhou, Zhigang Peng, Yiqiang Zhan, Maneesh Dewan, Bing Jian, Arun Krishnan, Yimo Tao, Martin Harder, Stefan Grosskopf, Ute Feuerlein: Redundancy, redundancy, redundancy: the three keys to highly robust anatomical parsing in medical images. Multimedia Information Retrieval 2010: 175-184

Le Lu, Jinbo Bi, Shipeng Yu, Zhigang Peng, Arun Krishnan, Xiang Sean Zhou: Hierarchical learning for tubular structure parsing in medical imaging: A study on coronary arteries using 3D CT Angiography. ICCV 2009: 2021-2028

Yimo Tao, Zhigang Peng, Bing Jian, Jianhua Xuan, Arun Krishnan, Xiang Sean Zhou: Robust Learning-Based Annotation of Medical Radiographs. MCBR-CDS 2009: 77-88

Yimo Tao, Le Lu, Maneesh Dewan, Albert Y. Chen, Jason J. Corso, Jianhua Xuan, Marcos Salganicoff, Arun Krishnan: Multi-level Ground Glass Nodule Detection and Segmentation in CT Lung Images. MICCAI (1) 2009: 715-723

Anton Kratz, Masaru Tomita, Arun Krishnan: GeNESiS: gene network evolution simulation software. BMC Bioinformatics 9 (2008)

Xiang Sean Zhou, Sonja Zillner, Manuel Möller, Michael Sintek, Yiqiang Zhan, Arun Krishnan, Alok Gupta: Semantics and CBIR: a medical imaging perspective. CIVR 2008: 571-580

Yiqiang Zhan, Xiang Sean Zhou, Zhigang Peng, Arun Krishnan: Active Scheduling of Organ Detection and Segmentation in Whole-Body Medical Images. MICCAI (1) 2008: 313-321

Arun Krishnan, Kuo-Bin Li: Beyond String Algorithms: Protein Sequence Analysis Using Wavelet Transforms. Analysis of Biological Data: A Soft Computing Approach 2007: 109-131

Anna K. Jerebko, G. P. Schmidt, Xiang Sean Zhou, Jinbo Bi, V. Anand, J. Liu, S. Schoenberg, I. Schmuecking, B. Kiefer, Arun Krishnan: Robust Parametric Modeling Approach Based on Domain Knowledge for Computer Aided Detection of Vertebrae Column Metastases in MRI. IPMI 2007: 713-724

Gek Huey Chua, Arun Krishnan, Kuo-Bin Li, Masaru Tomita: Multiresolution Analysis Uncovers Hidden Conservation of Properties in Structurally and Functionally Similar Proteins. J. Bioinformatics and Computational Biology 4(6): 1245-1268 (2006)

Kazunori Okada, Xiaolei Huang, Xiang Zhou, Arun Krishnan: Robust Click-Point Linking for Longitudinal Follow-Up Studies. MIAR 2006: 252-260

Pawan Dhar, Tan Chee Meng, Sandeep Somani, Li Ye, Kishore R. Sakharkar, Arun Krishnan, Azmi B. M. Ridwan, Sebastian Ho Kok Wah, Mandar Chitre, Hao Zhu: Grid Cellware: the first grid-enabled tool for modelling and simulating cellular processes. Bioinformatics 21(7): 1284-1287 (2005)

Tariq Riaz, Hen Ley Hor, Arun Krishnan, Francis Tang, Kuo-Bin Li: WebAllergen: a web server for predicting allergenic proteins. Bioinformatics 21(10): 2570-2571 (2005)

Francis Tang, Ching Lian Chua, Liang-Yoong Ho, Yun-Ping Lim, Praveen Issac, Arun Krishnan: Wildfire: distributed, Grid-enabled workflow construction and execution. BMC Bioinformatics 6: 69 (2005)

Xiaoxing Liu, Arun Krishnan, Adrian Mondry: An Entropy-based gene selection method for cancer classification using microarray data. BMC Bioinformatics 6: 76 (2005)

Deepak Sarda, Gek Huey Chua, Kuo-Bin Li, Arun Krishnan: pSLIP: SVM based protein subcellular localization prediction using multiple physicochemical properties. BMC Bioinformatics 6: 152 (2005)

Jiren Wang, Wing-Kin Sung, Arun Krishnan, Kuo-Bin Li: Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines. BMC Bioinformatics 6: 174 (2005)

Arun Krishnan: GridBLAST: a Globus-based high-throughput implementation of BLAST in a Grid computing framework. Concurrency and Computation: Practice and Experience 17(13): 1607-1623 (2005)

Chua Ching Lian, Francis Tang, Praveen Issac, Arun Krishnan: GEL: Grid execution language. J. Parallel Distrib. Comput. 65(7): 857-869 (2005)

Kazunori Okada, Dorin Comaniciu, Arun Krishnan: Robust anisotropic Gaussian fitting for volumetric characterization of Pulmonary nodules in multislice CT. IEEE Trans. Med. Imaging 24(3): 409-423 (2005)

Kazunori Okada, Umut Akdemir, Arun Krishnan: Blob Segmentation Using Joint Space-Intensity Likelihood Ratio Test: Application to 3D Tumor Segmentation. CVPR (2) 2005: 437-444

Kazunori Okada, Visvanathan Ramesh, Arun Krishnan, Maneesh Singh, Umut Akdemir: Robust Pulmonary Nodule Segmentation in CT: Improving Performance for Juxtapleural Cases. MICCAI (2) 2005: 781-789

Kuo-Bin Li, Praveen Issac, Arun Krishnan: Predicting allergenic proteins using wavelet transform. Bioinformatics 20(16): 2572-2578 (2004)

Arun Krishnan, Francis Tang: Exhaustive whole-genome tandem repeats search. Bioinformatics 20(16): 2702-2710 (2004)

Arun Krishnan, Kuo-Bin Li, Praveen Issac: Rapid detection of conserved regions in protein sequences using wavelets. In Silico Biology 4 (2004)

Arun Krishnan: A Survey of Life Sciences Applications on the Grid. New Generation Comput. 22(2): 111-125 (2004)

Pascal Cathier, Senthil Periaswamy, Anna K. Jerebko, Murat Dundar, J. Liang, Glenn Fung, Jonathan Stoeckel, T. Venkata, R. Amara, Arun Krishnan, R. Bharat Rao, Alok Gupta, E. Vega, Shaked Laks, A. Megibow, Michael Macari, Luca Bogoni: CAD for polyp detection: an invaluable tool to meet the increasing need for colon-cancer screening. CARS 2004: 978-982

Kazunori Okada, Dorin Comaniciu, Arun Krishnan: Scale Selection for Anisotropic Scale-Space: Application to Volumetric Tumor Characterization. CVPR (1) 2004: 594-601

Kazunori Okada, Dorin Comaniciu, Navneet Dalal, Arun Krishnan: A Robust Algorithm for Characterizing Anisotropic Local Structures. ECCV (1) 2004: 549-561

Azmi B. M. Ridwan, Arun Krishnan, Pawan Dhar: A Parallel Implementation of Gillespie's Direct Method. International Conference on Computational Science 2004: 284-291

Kazunori Okada, Dorin Comaniciu, Arun Krishnan: Robust 3D Segmentation of Pulmonary Nodules in Multislice CT Images. MICCAI (2) 2004: 881-889

Ching Lian Chua, Francis Tang, Yun-Ping Lim, Liang-Yoong Ho, Arun Krishnan: Implementing a Bioinformatics Workflow in a Parallel and Distributed Environment. PDCAT 2004: 1-4

Da-Jun Toh, Francis Tang, Travis Lee, Deepak Sarda, Arun Krishnan, Andrew B. Goryachev: Parallel Computing Platform for the Agent-Based Modeling of Multicellular Biological Systems. PDCAT 2004: 5-8

Francis Tang, Ho Liang Yoong, Chua Ching Lian, Arun Krishnan: A Universal Machine File Format for MPI Jobs. PDCAT 2004: 740-743

Xiang Sean Zhou, Dorin Comaniciu, Arun Krishnan: Conditional Feature Sensitivity: A Unifying View on Active Recognition and Feature Selection. ICCV 2003: 1502-1511

Arun Krishnan, Narendra Ahuja: Range estimation from focus using a non-frontal imaging camera. International Journal of Computer Vision 20(3): 169-185 (1996)

Arun Krishnan, Narendra Ahuja: Panoramic Image Acquisition. CVPR 1996: 379-384

Arun Krishnan, Narendra Ahuja: Range Estimation From Focus Using a Non-frontal Imaging Camera. AAAI 1993: 830-835