Pietro Liò

Yoli Shavit, Pietro Liò: CytoHiC: a cytoscape plugin for visual comparison of Hi-C networks. Bioinformatics 29(9): 1206-1207 (2013)

Jole Costanza, Giovanni Carapezza, Claudio Angione, Pietro Liò, Giuseppe Nicosia: Robust design of microbial strains. Bioinformatics 28(23): 3097-3104 (2012)

Pietro Liò, Nicola Paoletti, Mohammad Moni, Kathryn Atwell, Emanuela Merelli, Marco Viceconti: Modelling osteomyelitis. BMC Bioinformatics 13(S-14): S12 (2012)

Xiaofeng Lu, Don Towsley, Pietro Liò, Zhang Xiong: An adaptive directional MAC protocol for ad hoc networks using directional antennas. SCIENCE CHINA Information Sciences 55(6): 1360-1371 (2012)

Claudio Angione, Pietro Liò, Giuseppe Nicosia: How to Compute with Metabolism in Bacteria? ERCIM News 2012(91) (2012)

Nicola Paoletti, Pietro Liò, Emanuela Merelli, Marco Viceconti: Multilevel Computational Modeling and Quantitative Analysis of Bone Remodeling. IEEE/ACM Trans. Comput. Biology Bioinform. 9(5): 1366-1378 (2012)

Ezio Bartocci, Pietro Liò, Emanuela Merelli, Nicola Paoletti: Multiple Verification in Complex Biological Systems: The Bone Remodelling Case Study. T. Comp. Sys. Biology 14: 53-76 (2012)

Jole Costanza, Giovanni Carapezza, Claudio Angione, Pietro Liò, Giuseppe Nicosia: Multi-objective Optimisation, Sensitivity and Robustness Analysis in FBA Modelling. CMSB 2012: 127-147

Pietro Liò, Emanuela Merelli, Nicola Paoletti: Disease processes as hybrid dynamical systems. HSB 2012: 152-166

Carlos A. Coello Coello, Julie Greensmith, Natalio Krasnogor, Pietro Liò, Giuseppe Nicosia, Mario Pavone (Eds.): Artificial Immune Systems - 11th International Conference, ICARIS 2012, Taormina, Italy, August 28-31, 2012. Proceedings. Lecture Notes in Computer Science 7597, Springer 2012, isbn 978-3-642-33756-7

Eiko Yoneki, Jon Crowcroft, Pietro Liò, Neil Walton, Milan Vojnovic, Roger M. Whitaker: Message from the workshop on the future of social networking. Computer Communication Review 41(3): 14-18 (2011)

Sasitharan Balasubramaniam, Kenji Leibnitz, Pietro Liò, Dmitri Botvich, Masayuki Murata: Biological principles for future internet architecture design. IEEE Communications Magazine 49(7): 44-52 (2011)

Pietro Liò, Emanuela Merelli, Nicola Paoletti, Marco Viceconti: A Combined Process Algebraic and Stochastic Approach to Bone Remodeling. Electr. Notes Theor. Comput. Sci. 277: 41-52 (2011)

Emanuela Merelli, Nicola Paoletti, Pietro Liò: Methodological Bridges for Multi-Level Systems. Procedia CS 7: 180-182 (2011)

Nicola Paoletti, Pietro Liò, Emanuela Merelli, Marco Viceconti: Osteoporosis: a multiscale modeling viewpoint. CMSB 2011: 183-193

Renato Umeton, Giovanni Stracquadanio, Anilkumar Sorathiya, Pietro Liò, Alessio Papini, Giuseppe Nicosia: Design of robust metabolic pathways. DAC 2011: 747-752

Xiaofeng Lu, Pan Hui, Pietro Liò: Evolving Model of Opportunistic Routing in Delay Tolerant Networks. MSN 2011: 276-281

Richard C. van der Wath, Elizabeth van der Wath, Pietro Liò: Parallel Hematopoietic Stem Cell Division Rate Estimation Using an Agent-Based Model on the Grid. PDP 2011: 311-317

Pietro Liò, Emanuela Merelli, Nicola Paoletti: Multiple verification in computational modeling of bone pathologies. CompMod 2011: 82-96

Pietro Liò, Giuseppe Nicosia, Thomas Stibor (Eds.): Artificial Immune Systems - 10th International Conference, ICARIS 2011, Cambridge, UK, July 18-21, 2011. Proceedings. Lecture Notes in Computer Science 6825, Springer 2011, isbn 978-3-642-22370-9

Ian X. Y. Leung, Shu Yan Chan, Pan Hui, Pietro Liò: Intra-City Urban Network and Traffic Flow Analysis from GPS Mobility Trace. CoRR abs/1105.5839 (2011)

Emanuele Massaro, Andrea Guazzini, Franco Bagnoli, Pietro Liò: Information dynamics algorithm for detecting communities in networks. CoRR abs/1112.1224 (2011)

Anil Sorathiya, Andrea Bracciali, Pietro Liò: Formal reasoning on qualitative models of coinfection of HIV and Tuberculosis and HAART therapy. BMC Bioinformatics 11(S-1): 67 (2010)

Marco Aldinucci, Andrea Bracciali, Pietro Liò: Formal Synthetic Immunology. ERCIM News 2010(82): 40-41 (2010)

Pietro Liò, Dinesh C. Verma: Biologically inspired networking [Guest Editorial]. IEEE Network 24(3): 4 (2010)

Massimo Ostilli, Eiko Yoneki, Ian X. Y. Leung, Jose F. F. Mendes, Pietro Liò, Jon Crowcroft: Statistical mechanics of rumour spreading in network communities. Procedia CS 1(1): 2331-2339 (2010)

Stephan Kitchovitch, Pietro Liò: Risk perception and disease spread on social networks. Procedia CS 1(1): 2345-2354 (2010)

Andrea Guazzini, Pietro Liò, Franco Bagnoli, Andrea Passarella, Marco Conti: Cognitive network dynamics in chatlines. Procedia CS 1(1): 2355-2362 (2010)

Anil Sorathiya, Andrea Bracciali, Pietro Liò: An integrated modelling approach for R5-X4 mutation and HAART therapy assessment. Swarm Intelligence 4(4): 319-340 (2010)

Xiaofeng Lu, Fletcher Wicker, Don Towsley, Zhang Xiong, Pietro Liò: Detection Probability Estimation of Directional Antennas and Omni-Directional Antennas. Wireless Personal Communications 55(1): 51-63 (2010)

Giovanni Stracquadanio, Renato Umeton, Alessio Papini, Pietro Liò, Giuseppe Nicosia: Analysis and Optimization of C3 Photosynthetic Carbon Metabolism. BIBE 2010: 44-51

Yuedong Song, Sarita Azad, Pietro Liò: A New Approach for Epileptic Seizure Detection using Extreme Learning Machine. BIOSIGNALS 2010: 436-441

Tak-Ming Chan, Kwong-Sak Leung, Kin-Hong Lee, Pietro Liò: Generic spaced DNA motif discovery using Genetic Algorithm. IEEE Congress on Evolutionary Computation 2010: 1-8

Marco Aldinucci, Andrea Bracciali, Pietro Liò, Anil Sorathiya, Massimo Torquati: StochKit-FF: Efficient Systems Biology on Multicore Architectures. Euro-Par Workshops 2010: 167-175

Marco Aldinucci, Andrea Bracciali, Pietro Liò, Anil Sorathiya, Massimo Torquati: StochKit-FF: Efficient Systems Biology on Multicore Architectures. CoRR abs/1007.1768 (2010)

Uichin Lee, Eugenio Magistretti, Mario Gerla, Paolo Bellavista, Pietro Liò, Kang-Won Lee: Bio-inspired multi-agent data harvesting in a proactive urban monitoring environment. Ad Hoc Networks 7(4): 725-741 (2009)

Luciano Milanesi, Paolo Romano, Gastone C. Castellani, Daniel Remondini, Pietro Liò: Trends in modeling Biomedical Complex Systems. BMC Bioinformatics 10(S-12): 0 (2009)

Emanuel Schwarz, F. Markus Leweke, Sabine Bahn, Pietro Liò: Clinical bioinformatics for complex disorders: a schizophrenia case study. BMC Bioinformatics 10(S-12): 6 (2009)

Xiaofeng Lu, Don Towsley, Pietro Liò, Fletcher Wicker, Zhang Xiong: Minimizing Detection Probability Routing in Ad Hoc Networks Using Directional Antennas. EURASIP J. Wireless Comm. and Networking 2009 (2009)

Claudia Angelini, Italia De Feis, Viet Anh Nguyen, Richard C. van der Wath, Pietro Liò: Combining Replicates and Nearby Species Data: A Bayesian Approach. CIBB 2009: 191-205

Yu-En Lu, Sam G. B. Roberts, Tammy M. K. Cheng, Robin Dunbar, Pietro Liò, Jon Crowcroft: On optimising personal network size to manage information flow. CIKM-CNIKM 2009: 19-26

Shu Yan Chan, Ian X. Y. Leung, Pietro Liò: Fast centrality approximation in modular networks. CIKM-CNIKM 2009: 31-38

Giampaolo Bella, Pietro Liò: Formal Analysis of the Genetic Toggle. CMSB 2009: 96-110

Yu-En Lu, Sam G. B. Roberts, Pietro Liò, Robin Dunbar, Jon Crowcroft: Size Matters: Variation in Personal Network Size, Personality and Effect on Information Transmission. CSE (4) 2009: 188-193

Andrea Guazzini, Pietro Liò, Andrea Passarella, Marco Conti: Information Processing and Timing Mechanisms in Vision. ICANN (1) 2009: 325-334

Shengkun Xie, Pietro Liò, Anna T. Lawniczak: A Case Study of ICA with Multi-scale PCA of Simulated Traffic Data. ICANN (2) 2009: 358-367

Anil Sorathiya, Pietro Liò, Luca Sguanci: Mathematical Model of HIV Superinfection and Comparative Drug Therapy. ICARIS 2009: 41-53

Stephan Kitchovitch, Ian X. Y. Leung, Yuedong Song, Pietro Liò: Using Mutual Information and Models of Evolution for Improved Pattern Petection. IJCBS 2009: 215-221

Tammy M. K. Cheng, Yu-En Lu, Pietro Liò: Identification of structurally important amino acids in proteins by graph-theoretic measures. KDD Workshop on Statistical and Relational Learning in Bioinformatics 2009: 7-11

Stephan Kitchovitch, Yuedong Song, Richard C. van der Wath, Pietro Liò: Substitution Matrices and Mutual Information Approaches to Modeling Evolution. LION 2009: 259-272

Matteo Brilli, Renato Fani, Pietro Liò: Current trends in the bioinformatic sequence analysis of metabolic pathways in prokaryotes. Briefings in Bioinformatics 9(1): 34-45 (2008)

Matteo Brilli, Alessio Mengoni, Marco Fondi, Marco Bazzicalupo, Pietro Liò, Renato Fani: Analysis of plasmid genes by phylogenetic profiling and visualization of homology relationships using Blast2Network. BMC Bioinformatics 9 (2008)

Tammy M. K. Cheng, Yu-En Lu, Michele Vendruscolo, Pietro Liò, Tom L. Blundell: Prediction by Graph Theoretic Measures of Structural Effects in Proteins Arising from Non-Synonymous Single Nucleotide Polymorphisms. PLoS Computational Biology 4(7) (2008)

Ian X. Y. Leung, Gareth Gibbs, Franco Bagnoli, Anil Sorathiya, Pietro Liò: Contact Network Modeling of Flu Epidemics. ACRI 2008: 354-361

Richard C. van der Wath, Pietro Liò: A Stochastic Multi-agent Model of Stem Cell Proliferation. ACRI 2008: 500-505

Xiaofeng Lu, Yung-chih Chen, Ian X. Y. Leung, Zhang Xiong, Pietro Liò: A Novel Mobility Model from a Heterogeneous Military MANET Trace. ADHOC-NOW 2008: 463-474

Pietro Liò, Matteo Brilli, Renato Fani: Topological Metrics in Blast Data Mining: Plasmid and Nitrogen-Fixing Proteins Case Studies. BIRD 2008: 207-220

Emanuel Schwarz, F. Markus Leweke, Sabine Bahn, Pietro Liò: Combining Molecular and Physiological Data of Complex Disorders. BIRD 2008: 362-376

Richard C. van der Wath, Elizabeth van der Wath, Antonio Carapelli, Francesco Nardi, Francesco Frati, Luciano Milanesi, Pietro Liò: Bayesian Phylogeny on Grid. BIRD 2008: 404-416

Anil Sorathiya, Tadas Jucikas, Stephanie Piecewicz, Shiladitya Sengupta, Pietro Liò: Searching for Glycomics Role in Stem Cell Development. CIBB 2008: 198-209

Yu-En Lu, Pietro Liò, Steven Hand: On low dimensional random projections and similarity search. CIKM 2008: 749-758

Richard C. van der Wath, Pietro Liò: A Stochastic Single Cell Based Model of BrdU Measured Hematopoietic Stem Cell Kinetics. CMSB 2008: 387-401

Xiaofeng Lu, Pan Hui, Pietro Liò, Zhang Xiong: Identity Privacy Protection by Delayed Transmission in Pocket Switched Networks. EUC (2) 2008: 272-277

Zdena Koukolíková-Nicola, Pietro Liò, Franco Bagnoli: Inference on Missing Values in Genetic Networks Using High-Throughput Data. EvoBIO 2008: 106-116

Viet Anh Nguyen, Zdena Koukolíková-Nicola, Franco Bagnoli, Pietro Liò: Bayesian Inference on Hidden Knowledge in High-Throughput Molecular Biology Data. PRICAI 2008: 829-838

Stuart M. Allen, Marco Conti, Jon Crowcroft, Robin Dunbar, Pietro Liò, José Fernando Mendes, Refik Molva, Andrea Passarella, Ioannis Stavrakakis, Roger M. Whitaker: Social Networking for Pervasive Adaptation. SASO Workshops 2008: 49-54

Frank Stajano, Lucia Bianchi, Pietro Liò, Douwe Korff: Forensic genomics: kin privacy, driftnets and other open questions. WPES 2008: 15-22

Pietro Liò, Eiko Yoneki, Jon Crowcroft, Dinesh C. Verma (Eds.): Bio-Inspired Computing and Communication, First Workshop on Bio-Inspired Design of Networks, BIOWIRE 2007, Cambridge, UK, April 2-5, 2007, Revised Selected Papers. Lecture Notes in Computer Science 5151, Springer 2008, isbn 978-3-540-92190-5

Franco Bagnoli, Andrea Guazzini, Pietro Liò: Human Heuristics for Autonomous Agents. CoRR abs/0801.3048 (2008)

Lucia Bianchi, Pietro Liò: Forensic DNA and bioinformatics. Briefings in Bioinformatics 8(2): 117-128 (2007)

Matteo Brilli, Renato Fani, Pietro Liò: MotifScorer: using a compendium of microarrays to identify regulatory motifs. Bioinformatics 23(4): 493-495 (2007)

Cécile Caretta-Cartozo, Paolo De Los Rios, Francesco Piazza, Pietro Liò: Bottleneck Genes and Community Structure in the Cell Cycle Network of S. pombe. PLoS Computational Biology 3(6) (2007)

Uichin Lee, Eugenio Magistretti, Mario Gerla, Paolo Bellavista, Pietro Liò, Kang-Won Lee: Bio-Inspired Multi-agent Collaboration for Urban Monitoring Applications. BIOWIRE 2007: 204-216

Pietro Liò, Anna T. Lawniczak, Shengkun Xie, Jiaying Xu: Wavelet-Domain Statistics of Packet Switching Networks Near Traffic Congestion. BIOWIRE 2007: 268-279

Yu-En Lu, Pietro Liò, Steven Hand: Beta Random Projection. BIOWIRE 2007: 319-331

Franco Bagnoli, Andrea Guazzini, Pietro Liò: Human Heuristics for Autonomous Agents. BIOWIRE 2007: 340-351

Claudia Angelini, Luisa Cutillo, Italia De Feis, Richard C. van der Wath, Pietro Liò: Identifying Regulatory Sites Using Neighborhood Species. EvoBIO 2007: 1-10

Tom M. W. Nye, Pietro Liò, Walter R. Gilks: A novel algorithm and web-based tool for comparing two alternative phylogenetic trees. Bioinformatics 22(1): 117-119 (2006)

Luca Sguanci, Pietro Liò, Franco Bagnoli: The Influence of Risk Perception in Epidemics: A Cellular Agent Model. ACRI 2006: 321-329

Luca Sguanci, Pietro Liò, Franco Bagnoli: Modeling Evolutionary Dynamics of HIV Infection. CMSB 2006: 196-211

Yu-En Lu, Steven Hand, Pietro Liò: Keyword Searching in Structured Overlays Via Content Distance Addressing. DBISP2P 2006: 259-272

Yu-En Lu, Steven Hand, Pietro Liò: Keyword Searching in Hypercubic Manifolds. Peer-to-Peer Computing 2005: 150-151

Mahlet G. Tadesse, Marina Vannucci, Pietro Liò: Identification of DNA regulatory motifs using Bayesian variable selection. Bioinformatics 20(16): 2553-2561 (2004)

Pietro Liò: Dimensionality and Dependence Problems in Statistical Genomics. Briefings in Bioinformatics 4(2): 168-178 (2003)

Pietro Liò: Wavelets in bioinformatics and computational biology: state of art and perspectives. Bioinformatics 19(1): 2-9 (2003)

Pietro Liò, Marina Vannucci: Wavelet change-point prediction of transmembrane proteins. Bioinformatics 16(4): 376-382 (2000)

Pietro Liò, Marina Vannucci: Finding pathogenicity islands and gene transfer events in genome data. Bioinformatics 16(10): 932-940 (2000)

Pietro Liò, N. Goldman, Jeffrey L. Thorne, David T. Jones: PASSML: combining evolutionary inference and protein secondary structure prediction. Bioinformatics 14(8): 726-733 (1998)