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Erik Lindahl
2010 – today
- 2013
[j11]Sander Pronk, Szilárd Páll, Roland Schulz, Per Larsson, Pär Bjelkmar, Rossen Apostolov, Michael R. Shirts, Jeremy C. Smith, Peter M. Kasson, David van der Spoel, Berk Hess, Erik Lindahl: GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit. Bioinformatics 29(7): 845-854 (2013)- 2012
- [j10]Arjun Ray, Erik Lindahl, Björn Wallner: Improved model quality assessment using ProQ2. BMC Bioinformatics 13: 224 (2012)
- [j9]Samuel Murail, Rebecca J. Howard, Torben Broemstrup, Edward J. Bertaccini, R. Adron Harris, James R. Trudell, Erik Lindahl: Molecular Mechanism for the Dual Alcohol Modulation of Cys-loop Receptors. PLoS Computational Biology 8(10) (2012)
- 2011
- [c3]Sander Pronk, Per Larsson, Iman Pouya, Gregory R. Bowman, Imran S. Haque, Kyle Beauchamp, Berk Hess, Vijay S. Pande, Peter M. Kasson, Erik Lindahl: Copernicus: a new paradigm for parallel adaptive molecular dynamics. SC 2011: 60
- [c2]Szilárd Páll, Berk Hess, Erik Lindahl: Poster: 3D tixels: a highly efficient algorithm for gpu/cpu-acceleration of molecular dynamics on heterogeneous parallel architectures. SC Companion 2011: 71-72
- 2010
- [j8]Arjun Ray, Erik Lindahl, Björn Wallner: Model quality assessment for membrane proteins. Bioinformatics 26(24): 3067-3074 (2010)
- [j7]Per Larsson, Erik Lindahl: A high-performance parallel-generalized born implementation enabled by tabulated interaction rescaling. Journal of Computational Chemistry 31(14): 2593-2600 (2010)
- [j6]Peter M. Kasson, Erik Lindahl, Vijay S. Pande: Atomic-Resolution Simulations Predict a Transition State for Vesicle Fusion Defined by Contact of a Few Lipid Tails. PLoS Computational Biology 6(6) (2010)
2000 – 2009
- 2009
- [j5]Pär Bjelkmar, Perttu S. Niemelä, Ilpo Vattulainen, Erik Lindahl: Conformational Changes and Slow Dynamics through Microsecond Polarized Atomistic Molecular Simulation of an Integral Kv1.2 Ion Channel. PLoS Computational Biology 5(2) (2009)
- 2007
- [j4]Carsten Kutzner, David van der Spoel, Martin Fechner, Erik Lindahl, Udo W. Schmitt, Bert L. de Groot, Helmut Grubmüller: Speeding up parallel GROMACS on high-latency networks. Journal of Computational Chemistry 28(12): 2075-2084 (2007)
- 2006
- [j3]Cyril Azuara, Erik Lindahl, Patrice Koehl, Henri Orland, Marc Delarue: PDB_Hydro: incorporating dipolar solvents with variable density in the Poisson-Boltzmann treatment of macromolecule electrostatics. Nucleic Acids Research 34(Web-Server-Issue): 38-42 (2006)
- [j2]Erik Lindahl, Cyril Azuara, Patrice Koehl, Marc Delarue: NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysis. Nucleic Acids Research 34(Web-Server-Issue): 52-56 (2006)
- [c1]Carsten Kutzner, David van der Spoel, Martin Fechner, Erik Lindahl, Udo W. Schmitt, Bert L. de Groot, Helmut Grubmüller: Improved GROMACS Scaling on Ethernet Switched Clusters. PVM/MPI 2006: 404-405
- 2005
- [j1]David van der Spoel, Erik Lindahl, Berk Hess, Gerrit Groenhof, Alan E. Mark, Herman J. C. Berendsen: GROMACS: Fast, flexible, and free. Journal of Computational Chemistry 26(16): 1701-1718 (2005)
Coauthor Index
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last updated on 2013-04-11 18:42 CEST by the dblp team