Mallur S. Madhusudhan

Hannes Braberg, Benjamin M. Webb, Elina Tjioe, Ursula Pieper, Andrej Sali, Mallur S. Madhusudhan: SALIGN: a web server for alignment of multiple protein sequences and structures. Bioinformatics 28(15): 2072-2073 (2012)

Ursula Pieper, Benjamin M. Webb, David T. Barkan, Dina Schneidman-Duhovny, Avner Schlessinger, Hannes Braberg, Zheng Yang, Elaine C. Meng, Eric F. Pettersen, Conrad C. Huang, Ruchira S. Datta, Parthasarathy Sampathkumar, Mallur S. Madhusudhan, Kimmen Sjölander, Thomas E. Ferrin, Stephen K. Burley, Andrej Sali: ModBase, a database of annotated comparative protein structure models, and associated resources. Nucleic Acids Research 39(Database-Issue): 465-474 (2011)

Kuan Pern Tan, Raghavan Varadarajan, Mallur S. Madhusudhan: DEPTH: a web server to compute depth and predict small-molecule binding cavities in proteins. Nucleic Acids Research 39(Web-Server-Issue): 242-248 (2011)

Marc A. Martí-Renom, Ursula Pieper, Mallur S. Madhusudhan, Andrea Rossi, Narayanan Eswar, Fred P. Davis, Fátima Al-Shahrour, Joaquín Dopazo, Andrej Sali: DBAli tools: mining the protein structure space. Nucleic Acids Research 35(Web-Server-Issue): 393-397 (2007)

Kanika Bajaj, Mallur S. Madhusudhan, Bharat V. Adkar, Purbani Chakrabarti, C. Ramakrishnan, Andrej Sali, Raghavan Varadarajan: Stereochemical Criteria for Prediction of the Effects of Proline Mutations on Protein Stability. PLoS Computational Biology 3(12) (2007)

Ursula Pieper, Narayanan Eswar, Fred P. Davis, Hannes Braberg, Mallur S. Madhusudhan, Andrea Rossi, Marc A. Martí-Renom, Rachel Karchin, Ben M. Webb, David Eramian, Min-Yi Shen, Libusha Kelly, Francisco Melo, Andrej Sali: MODBASE: a database of annotated comparative protein structure models and associated resources. Nucleic Acids Research 34(Database-Issue): 291-295 (2006)

Ursula Pieper, Narayanan Eswar, Hannes Braberg, Mallur S. Madhusudhan, Fred P. Davis, Ashley C. Stuart, Nebojsa Mirkovic, Andrea Rossi, Marc A. Martí-Renom, András Fiser, Ben M. Webb, Daniel M. Greenblatt, Conrad C. Huang, Thomas E. Ferrin, Andrej Sali: MODBASE, a database of annotated comparative protein structure models, and associated resources. Nucleic Acids Research 32(Database-Issue): 217-222 (2004)

Ingrid Y. Y. Koh, Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, Narayanan Eswar, Osvaldo Graña, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost: EVA: evaluation of protein structure prediction servers. Nucleic Acids Research 31(13): 3311-3315 (2003)

Narayanan Eswar, Bino John, Nebojsa Mirkovic, András Fiser, Valentin A. Ilyin, Ursula Pieper, Ashley C. Stuart, Marc A. Martí-Renom, Mallur S. Madhusudhan, Bozidar Yerkovich, Andrej Sali: Tools for comparative protein structure modeling and analysis. Nucleic Acids Research 31(13): 3375-3380 (2003)

Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, András Fiser, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost: EVA: continuous automatic evaluation of protein structure prediction servers. Bioinformatics 17(12): 1242-1243 (2001)